BLASTX nr result

ID: Bupleurum21_contig00030425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030425
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284621.2| PREDICTED: uncharacterized protein LOC100245...    60   2e-07
ref|XP_002520307.1| huntingtin interacting protein, putative [Ri...    57   1e-06

>ref|XP_002284621.2| PREDICTED: uncharacterized protein LOC100245350 [Vitis vinifera]
          Length = 2184

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
 Frame = +1

Query: 1    KSRWDQPVESNLCTSAPPHKEPRISCGSVQLSHLSPQHGISAVW---------------- 132
            KSRWDQP+E++      PHKE ++    +Q     PQ GIS +                 
Sbjct: 1857 KSRWDQPIEAHPDPRFHPHKEQKVQPNLLQSFGSIPQPGISEMVLDHTNGISRMDKDCPG 1916

Query: 133  ----SPHQTNTKAPDNNGHTIDEDVPPGFAAPLRGSLVSPSASSTAIELCQ 273
                 P Q   +  ++    + EDVPPGFA PL   L S +ASS + +L Q
Sbjct: 1917 FVHNHPQQDQAEEEEDERQNLHEDVPPGFAYPLNTPLFSSNASSASADLAQ 1967


>ref|XP_002520307.1| huntingtin interacting protein, putative [Ricinus communis]
            gi|223540526|gb|EEF42093.1| huntingtin interacting
            protein, putative [Ricinus communis]
          Length = 1746

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 20/108 (18%)
 Frame = +1

Query: 1    KSRWDQPVESNLCTSAPPHKEPRISCGSVQLSHLSPQHGISAVWSPH------------- 141
            KSRWDQP E      +  H E RI  G ++ S  +P   +    S H             
Sbjct: 1434 KSRWDQPAEEKPFRRSHQHDEQRIQSGLLEQSRFNPPTDMGKEVSEHADKRSGENSCCPH 1493

Query: 142  -------QTNTKAPDNNGHTIDEDVPPGFAAPLRGSLVSPSASSTAIE 264
                   Q      D    TI  D PPGF++PL   LV P+ASST I+
Sbjct: 1494 CVRNYCRQVEADCADLGRQTIQSDAPPGFSSPLNPPLVLPNASSTIID 1541


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