BLASTX nr result

ID: Bupleurum21_contig00030423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030423
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321987.1| predicted protein [Populus trichocarpa] gi|2...   296   6e-78
ref|XP_002272297.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]   285   1e-74
emb|CBI23024.3| unnamed protein product [Vitis vinifera]              283   3e-74
ref|XP_002521943.1| kinesin light chain, putative [Ricinus commu...   262   1e-67
ref|XP_003602279.1| Kinesin light chain [Medicago truncatula] gi...   259   6e-67

>ref|XP_002321987.1| predicted protein [Populus trichocarpa] gi|222868983|gb|EEF06114.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score =  296 bits (757), Expect = 6e-78
 Identities = 162/314 (51%), Positives = 217/314 (69%), Gaps = 5/314 (1%)
 Frame = -3

Query: 932 SFIHHPSLSSNSYRMNKMFLGIHSSPLSAHIMSVSVSLGIQNGNVTCYRKDSGAFSWRTT 753
           S +HHP LS+   R+ + F+ ++S  L   I   S+ L  Q  ++  Y   +   +    
Sbjct: 4   SLLHHPPLSNQ--RITQAFVDLNSRSLQRGITCFSICLQKQKCSIELYMIPTTTVARHWM 61

Query: 752 VRCYATTGSLNVD---SASALQKNIWGSSDSERSTRKPYISKKSFDN--NLEVMLQELFD 588
           ++ +A+ GSLN +     + +      S+D  RS      S K  D   + E  LQELFD
Sbjct: 62  LKTFASAGSLNAEVECQENQISSGFSTSNDFGRSKTVADSSSKPSDGVKDFERQLQELFD 121

Query: 587 EVKSMTRMGNTNDARDLLEANYEAVKQQIDEGDKNIEQAAILDVIALGYVAIGDLKMVEF 408
           EVK M +MGN NDA DLL+ANYE VK+QI+ G + IE+AA LD+IALGY+AIGDLK V F
Sbjct: 122 EVKMMIKMGNKNDAMDLLQANYEFVKEQINAGSRGIEEAATLDIIALGYMAIGDLKSVGF 181

Query: 407 LLSLLNEVVDKLLDDEPLLDSVLIHMGSMYTTLGKFEKSMHLYKRALGIIEQIYGNSSTL 228
           +L+ L+EVV++L DDEPLLDSVLIHMGSMY+ LGKFEKSM +Y+R + I+E+I+G  S  
Sbjct: 182 ILNKLDEVVERLTDDEPLLDSVLIHMGSMYSALGKFEKSMLVYQRVIAILERIHGKGSAF 241

Query: 227 LVTPLLGIGKVLGNIGRATKATDIYHRAITILETNRGAESEELVVPLFALGNLLIKEGKI 48
           LV+PLLG+ K+LG+IG+ATKA ++Y R I+ILE++RGAES++LVVPL  LGNLLIKEG+ 
Sbjct: 242 LVSPLLGMAKILGSIGKATKAIEVYQRVISILESSRGAESKDLVVPLSGLGNLLIKEGRA 301

Query: 47  IDAEKAFVRILNIY 6
            DAE  F RIL+IY
Sbjct: 302 TDAESLFNRILSIY 315


>ref|XP_002272297.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]
          Length = 573

 Score =  285 bits (728), Expect = 1e-74
 Identities = 159/308 (51%), Positives = 207/308 (67%), Gaps = 5/308 (1%)
 Frame = -3

Query: 914 SLSSNSYRMNKMFLGIHSSPLSAHIMSVSVSLGIQNGNVTCYRKDSGAFSWRTTVRCYAT 735
           SL   S R+++M +  HS  L+  +M  S+ L  Q  N+  Y   +        +R +AT
Sbjct: 4   SLLLPSQRISQMRM--HSEDLTKDVMCFSLCLKRQKCNIKLYMIPASTIVHHGVLRPFAT 61

Query: 734 TGSLNVDSASA---LQKNIWGSSDSERSTRKPYISKKSF--DNNLEVMLQELFDEVKSMT 570
            GS   D  +    +   ++  +  +RS    + S      +N+ E  LQELF+ VK+M 
Sbjct: 62  IGSSGADGINQGNHVSLGVFAPNKFQRSRTLLHSSSSPSGDENDFERQLQELFNAVKTMI 121

Query: 569 RMGNTNDARDLLEANYEAVKQQIDEGDKNIEQAAILDVIALGYVAIGDLKMVEFLLSLLN 390
           +MGN  DA DLL+ANYEAVK+QID G K +EQAAILD+I LGY+ +GDLK+V  LL +++
Sbjct: 122 KMGNKKDAIDLLQANYEAVKEQIDVGAKGMEQAAILDIIVLGYMLVGDLKLVRSLLDMMD 181

Query: 389 EVVDKLLDDEPLLDSVLIHMGSMYTTLGKFEKSMHLYKRALGIIEQIYGNSSTLLVTPLL 210
           ++VD L DDE LLDSVL+HMGS+Y+TLGKFEKSM +Y+RAL I+E  YG  S  L+TPLL
Sbjct: 182 KIVDGLKDDEALLDSVLLHMGSVYSTLGKFEKSMLMYRRALEILEMTYGKDSAFLITPLL 241

Query: 209 GIGKVLGNIGRATKATDIYHRAITILETNRGAESEELVVPLFALGNLLIKEGKIIDAEKA 30
           G+ K LG+IGR TKA +IYH+AI ILE +RGAESE+LVVPL  LGNLLIKE K  DAE  
Sbjct: 242 GMAKALGSIGRVTKAVEIYHQAIAILELSRGAESEDLVVPLLGLGNLLIKERKATDAEIP 301

Query: 29  FVRILNIY 6
           F RILNIY
Sbjct: 302 FTRILNIY 309


>emb|CBI23024.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  283 bits (725), Expect = 3e-74
 Identities = 154/293 (52%), Positives = 199/293 (67%), Gaps = 5/293 (1%)
 Frame = -3

Query: 869 IHSSPLSAHIMSVSVSLGIQNGNVTCYRKDSGAFSWRTTVRCYATTGSLNVDSASA---L 699
           +HS  L+  +M  S+ L  Q  N+  Y   +        +R +AT GS   D  +    +
Sbjct: 3   MHSEDLTKDVMCFSLCLKRQKCNIKLYMIPASTIVHHGVLRPFATIGSSGADGINQGNHV 62

Query: 698 QKNIWGSSDSERSTRKPYISKKSF--DNNLEVMLQELFDEVKSMTRMGNTNDARDLLEAN 525
              ++  +  +RS    + S      +N+ E  LQELF+ VK+M +MGN  DA DLL+AN
Sbjct: 63  SLGVFAPNKFQRSRTLLHSSSSPSGDENDFERQLQELFNAVKTMIKMGNKKDAIDLLQAN 122

Query: 524 YEAVKQQIDEGDKNIEQAAILDVIALGYVAIGDLKMVEFLLSLLNEVVDKLLDDEPLLDS 345
           YEAVK+QID G K +EQAAILD+I LGY+ +GDLK+V  LL +++++VD L DDE LLDS
Sbjct: 123 YEAVKEQIDVGAKGMEQAAILDIIVLGYMLVGDLKLVRSLLDMMDKIVDGLKDDEALLDS 182

Query: 344 VLIHMGSMYTTLGKFEKSMHLYKRALGIIEQIYGNSSTLLVTPLLGIGKVLGNIGRATKA 165
           VL+HMGS+Y+TLGKFEKSM +Y+RAL I+E  YG  S  L+TPLLG+ K LG+IGR TKA
Sbjct: 183 VLLHMGSVYSTLGKFEKSMLMYRRALEILEMTYGKDSAFLITPLLGMAKALGSIGRVTKA 242

Query: 164 TDIYHRAITILETNRGAESEELVVPLFALGNLLIKEGKIIDAEKAFVRILNIY 6
            +IYH+AI ILE +RGAESE+LVVPL  LGNLLIKE K  DAE  F RILNIY
Sbjct: 243 VEIYHQAIAILELSRGAESEDLVVPLLGLGNLLIKERKATDAEIPFTRILNIY 295


>ref|XP_002521943.1| kinesin light chain, putative [Ricinus communis]
           gi|223538868|gb|EEF40467.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 505

 Score =  262 bits (669), Expect = 1e-67
 Identities = 133/206 (64%), Positives = 163/206 (79%)
 Frame = -3

Query: 623 NNLEVMLQELFDEVKSMTRMGNTNDARDLLEANYEAVKQQIDEGDKNIEQAAILDVIALG 444
           N+    LQELFDEVK+M  MGN++DA DLL+ANYE VK+ ID G + IE+AA+LD+IALG
Sbjct: 36  NDFARQLQELFDEVKAMILMGNSSDAMDLLQANYEIVKELIDAGARGIEEAAMLDIIALG 95

Query: 443 YVAIGDLKMVEFLLSLLNEVVDKLLDDEPLLDSVLIHMGSMYTTLGKFEKSMHLYKRALG 264
           Y+AIGDL  V  +L+LLN V+  L DD PLLDSVL+HMGSMY+ LGKFEKSM  Y+R + 
Sbjct: 96  YMAIGDLGTVGSILNLLNMVIKNLKDDGPLLDSVLMHMGSMYSALGKFEKSMIAYQRVIS 155

Query: 263 IIEQIYGNSSTLLVTPLLGIGKVLGNIGRATKATDIYHRAITILETNRGAESEELVVPLF 84
           ++E  YG SS  +V PLLG+GKVLG+IGR  KAT++Y R I ILE+ RGAES+ELVVPLF
Sbjct: 156 VLESKYGESSIFIVPPLLGMGKVLGSIGRVNKATEVYQRVIIILESGRGAESKELVVPLF 215

Query: 83  ALGNLLIKEGKIIDAEKAFVRILNIY 6
            LGNLL+KEG+  DAE  F+RILNIY
Sbjct: 216 GLGNLLMKEGRTTDAEIHFIRILNIY 241


>ref|XP_003602279.1| Kinesin light chain [Medicago truncatula]
           gi|355491327|gb|AES72530.1| Kinesin light chain
           [Medicago truncatula]
          Length = 580

 Score =  259 bits (662), Expect = 6e-67
 Identities = 147/317 (46%), Positives = 204/317 (64%), Gaps = 15/317 (4%)
 Frame = -3

Query: 908 SSNSYRMNKMFLGIHSSPLSAHIMSVS-----VSLGI----QNGNVTCYRKDSGAFSWRT 756
           +S+ +  +  F+G  +S    H++S+      +S  +    QN N   Y       S   
Sbjct: 3   ASSCFVPSPSFIGFRTSKDRPHVLSLQEFKRIISFSVCNQKQNYNEKLYIIPIRTISRFC 62

Query: 755 TVRCYATTGSLNVDSASALQKNIWGSSDSERSTRKPYISKKSFDN------NLEVMLQEL 594
             R +A   SL +         + G S  +   R+  +S  S  +      N +  L+EL
Sbjct: 63  ISRSFAK--SLELGGTGPQSDALLGYSAPDEDNRRFTLSLDSASSAFHRFSNFDKELEEL 120

Query: 593 FDEVKSMTRMGNTNDARDLLEANYEAVKQQIDEGDKNIEQAAILDVIALGYVAIGDLKMV 414
           F EVK M +MG  +DA DLL ANYE VK++++ G K IE+AAILD++ALGY+A+GDLK V
Sbjct: 121 FGEVKKMIKMGKKSDAIDLLNANYEMVKERLNAGTKGIEEAAILDILALGYMAVGDLKSV 180

Query: 413 EFLLSLLNEVVDKLLDDEPLLDSVLIHMGSMYTTLGKFEKSMHLYKRALGIIEQIYGNSS 234
            +LL+ L EVVD L DD P LDS+++HMG+MY TL KFE+S++ Y+RA+ I+E+IYG  S
Sbjct: 181 GYLLNSLKEVVDTLKDDAPHLDSIVMHMGNMYATLNKFEESLNTYQRAVYIVERIYGKDS 240

Query: 233 TLLVTPLLGIGKVLGNIGRATKATDIYHRAITILETNRGAESEELVVPLFALGNLLIKEG 54
           T+LVTP LG+ K LG+IG+ATKA +IY   IT+LE+NRGAES++LVVPL +LGNLL+KEG
Sbjct: 241 TILVTPHLGMAKALGSIGKATKAVEIYQHVITLLESNRGAESKDLVVPLLSLGNLLLKEG 300

Query: 53  KIIDAEKAFVRILNIYT 3
           +  DAE  F R+LNIYT
Sbjct: 301 RANDAESRFSRVLNIYT 317


Top