BLASTX nr result

ID: Bupleurum21_contig00030411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030411
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279067.1| PREDICTED: uncharacterized protein LOC100259...   219   3e-55
ref|XP_003550090.1| PREDICTED: MHD domain-containing death-induc...   203   2e-50
ref|XP_004144963.1| PREDICTED: uncharacterized protein LOC101216...   200   1e-49
ref|NP_850004.1| clathrin adaptor complexes medium subunit famil...   191   1e-46
ref|XP_002886304.1| hypothetical protein ARALYDRAFT_900447 [Arab...   186   3e-45

>ref|XP_002279067.1| PREDICTED: uncharacterized protein LOC100259662 [Vitis vinifera]
           gi|297736956|emb|CBI26157.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score =  219 bits (558), Expect = 3e-55
 Identities = 108/191 (56%), Positives = 134/191 (70%), Gaps = 3/191 (1%)
 Frame = +1

Query: 22  GCSIRAIWILNPQDTXXXXXXXXXXXXXXXXACKLQEESDTD---NSSVFSNLPSDSELT 192
           GCSIRA+WILN  D+                ACK + E+ ++   N +V+  LP+DSEL 
Sbjct: 3   GCSIRALWILNNFDSVVFSRRFPVVERQWRTACKAENENSSNDNLNYTVYPLLPTDSELA 62

Query: 193 TAFADRRRREGSTRGFGIRVIQSVKGSDSWVDDPITRHIISLGLKKEPEGEDQLLWPLIL 372
            AF +R++REGS RGFGIRV QS +GSDSWVDDPITRHIISL + K+ E E+ +LWPLIL
Sbjct: 63  AAFVERKKREGSARGFGIRVTQSAEGSDSWVDDPITRHIISLFINKDEERENNMLWPLIL 122

Query: 373 HVKSHFCILVLPLVEPRHLLAYANMCKRSDCGSTVGEDGXXXXXXXXXXXITGAFMVAHA 552
           H+K H+CILVLPLVEP+HL AYA +C+RSDCG+ +G  G           ITGA MVAHA
Sbjct: 123 HMKGHYCILVLPLVEPQHLKAYAGVCRRSDCGNAIGVPGSLSSLLFDLPSITGACMVAHA 182

Query: 553 IGDIITGDSLE 585
           IGD+ITGD +E
Sbjct: 183 IGDVITGDVVE 193


>ref|XP_003550090.1| PREDICTED: MHD domain-containing death-inducing protein-like
           [Glycine max]
          Length = 627

 Score =  203 bits (517), Expect = 2e-50
 Identities = 105/194 (54%), Positives = 123/194 (63%)
 Frame = +1

Query: 4   LAKMSRGCSIRAIWILNPQDTXXXXXXXXXXXXXXXXACKLQEESDTDNSSVFSNLPSDS 183
           +A M  GCSIRAIWILN  D                 AC     +DT    +FS+LP+DS
Sbjct: 4   VAAMPSGCSIRAIWILNNLDGVVFSRRFPVVEKRWRAACNSNAHNDTHQ--IFSSLPTDS 61

Query: 184 ELTTAFADRRRREGSTRGFGIRVIQSVKGSDSWVDDPITRHIISLGLKKEPEGEDQLLWP 363
           +L  AF DR+ REGS RGFGIR   S  GSDSWVDDPITRHII L + +E E    LLWP
Sbjct: 62  DLADAFLDRKHREGSARGFGIRKSNSTLGSDSWVDDPITRHIIGLYISREGEENKNLLWP 121

Query: 364 LILHVKSHFCILVLPLVEPRHLLAYANMCKRSDCGSTVGEDGXXXXXXXXXXXITGAFMV 543
           LILH K  + IL+LPLVEP HL AYA +CKR DCG+ +G D            +TGAFM+
Sbjct: 122 LILHTKGLYSILILPLVEPIHLNAYARLCKRPDCGAALGMDDGLSSLLLDLPSVTGAFMI 181

Query: 544 AHAIGDIITGDSLE 585
           AHAIGDIITGD++E
Sbjct: 182 AHAIGDIITGDTVE 195


>ref|XP_004144963.1| PREDICTED: uncharacterized protein LOC101216895 [Cucumis sativus]
           gi|449472289|ref|XP_004153548.1| PREDICTED:
           uncharacterized protein LOC101206253 [Cucumis sativus]
           gi|449525381|ref|XP_004169696.1| PREDICTED:
           uncharacterized LOC101216895 [Cucumis sativus]
          Length = 625

 Score =  200 bits (509), Expect = 1e-49
 Identities = 106/194 (54%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
 Frame = +1

Query: 13  MSRGCSIRAIWILNPQDTXXXXXXXXXXXXXXXXACKLQEE---SDTDNSSVFSNLPSDS 183
           M  GC IRAIWI +  D                 ACK++ +   SD   S V   LP+DS
Sbjct: 1   MPDGCGIRAIWIFSNFDAVIFSRRFPVVERRWRTACKIENDRCNSDDIASDVSPVLPNDS 60

Query: 184 ELTTAFADRRRREGSTRGFGIRVIQSVKGSDSWVDDPITRHIISLGLKKEPEGEDQLLWP 363
           EL  AF +R++REGS  GFGIRVIQS +GSDSWVDDPITRHII L +KKE E     LWP
Sbjct: 61  ELAAAFVERKKREGSACGFGIRVIQSYEGSDSWVDDPITRHIIGLHVKKEEESSI-FLWP 119

Query: 364 LILHVKSHFCILVLPLVEPRHLLAYANMCKRSDCGSTVGEDGXXXXXXXXXXXITGAFMV 543
           LIL++KSH+ ILVLPLVEP+H+  YA++CKRSDCGS +G +            ITGAFMV
Sbjct: 120 LILNIKSHYSILVLPLVEPQHIKHYASLCKRSDCGSAIGAESSLSSLLLDLPSITGAFMV 179

Query: 544 AHAIGDIITGDSLE 585
           A AIGD+ITGD++E
Sbjct: 180 ALAIGDVITGDAVE 193


>ref|NP_850004.1| clathrin adaptor complexes medium subunit family protein
           [Arabidopsis thaliana]
           gi|18087614|gb|AAL58937.1|AF462850_1 At2g20790/F5H14.24
           [Arabidopsis thaliana] gi|19699154|gb|AAL90943.1|
           At2g20790/F5H14.24 [Arabidopsis thaliana]
           gi|330251979|gb|AEC07073.1| clathrin adaptor complexes
           medium subunit family protein [Arabidopsis thaliana]
          Length = 613

 Score =  191 bits (484), Expect = 1e-46
 Identities = 99/194 (51%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
 Frame = +1

Query: 13  MSRGCSIRAIWILNPQDTXXXXXXXXXXXXXXXXACKLQEESDTDNSSVFSNLPSDSELT 192
           M  GCSIRA+WI+N QDT                A K + E+          LP+D +++
Sbjct: 1   MPSGCSIRALWIINNQDTVVFSRRFPVVEKQWCSAYKTENEN---TGLDLPRLPTDQQIS 57

Query: 193 TAFADRRRREGSTRGFGIRVIQSVKGSDSWVDDPITRHIISLGLKKEPEGEDQ---LLWP 363
            +F  R+RREGSTRG+GIRV QS KGSDSWVDDPITRHIISL L +E + +D    +LWP
Sbjct: 58  DSFTRRKRREGSTRGYGIRVAQSTKGSDSWVDDPITRHIISLCLTEEDDDDDDERNILWP 117

Query: 364 LILHVKSHFCILVLPLVEPRHLLAYANMCKRSDCGSTVGEDGXXXXXXXXXXXITGAFMV 543
           + LH K+ + ILVLPLVEP+ +  Y  +C+RSDCG  VGED            ITGAFMV
Sbjct: 118 IALHTKALYSILVLPLVEPKEMKDYVKLCRRSDCGPAVGEDLSLSSLLLNISSITGAFMV 177

Query: 544 AHAIGDIITGDSLE 585
           AHA GDII+GD++E
Sbjct: 178 AHAFGDIISGDTVE 191


>ref|XP_002886304.1| hypothetical protein ARALYDRAFT_900447 [Arabidopsis lyrata subsp.
           lyrata] gi|297332144|gb|EFH62563.1| hypothetical protein
           ARALYDRAFT_900447 [Arabidopsis lyrata subsp. lyrata]
          Length = 613

 Score =  186 bits (471), Expect = 3e-45
 Identities = 95/198 (47%), Positives = 123/198 (62%), Gaps = 7/198 (3%)
 Frame = +1

Query: 13  MSRGCSIRAIWILNPQDTXXXXXXXXXXXXXXXXACKLQEESDTDNSSVFSNLPSDSELT 192
           M  GCSIRA+WI+N Q+                   K + E+          LP+D +++
Sbjct: 1   MPSGCSIRALWIINNQEAVVFSRRFPVVEKQWCSVYKSENENTP-------RLPTDQQIS 53

Query: 193 TAFADRRRREGSTRGFGIRVIQSVKGSDSWVDDPITRHIISLGLKKEPEGEDQ------- 351
            AF  R+RREGSTRG+GIRV QS KGSDSWVDDPITRHIISL L +E + +D+       
Sbjct: 54  NAFTRRKRREGSTRGYGIRVAQSTKGSDSWVDDPITRHIISLCLSEEDDDDDESDKNERN 113

Query: 352 LLWPLILHVKSHFCILVLPLVEPRHLLAYANMCKRSDCGSTVGEDGXXXXXXXXXXXITG 531
           +LWP+ LH K+ + ILVLPLVEP+ +  Y  +C+RSDCG  VGED            +TG
Sbjct: 114 ILWPIALHTKALYSILVLPLVEPKEMKDYVKLCRRSDCGPAVGEDLSLSSLLLNISSVTG 173

Query: 532 AFMVAHAIGDIITGDSLE 585
           AFMVAHA GDI++GD++E
Sbjct: 174 AFMVAHAFGDIVSGDTVE 191


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