BLASTX nr result

ID: Bupleurum21_contig00030403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030403
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   9e-11
ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10

>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 41/104 (39%), Positives = 55/104 (52%)
 Frame = +1

Query: 34  LPLWVKFSQVPDCYWTREGLSFIASVIGRPLCADQVTLKLNPASFAKMCVCYRAGDPLPK 213
           +P+WV+   VP  YWT +GLS +AS IG PL AD  TL     S+A++CV   A   L K
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 299

Query: 214 TIPVTCLDPSGVRFTTDVGVTYPFKPLFCKGCESLGHSIAACPT 345
              + C  P+G+  T  +   Y + P  C  C   GH+ A C T
Sbjct: 300 EYDLRC--PNGLFIT--ISAEYEWIPSKCSNCNVFGHTTALCAT 339


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 40/104 (38%), Positives = 55/104 (52%)
 Frame = +1

Query: 34  LPLWVKFSQVPDCYWTREGLSFIASVIGRPLCADQVTLKLNPASFAKMCVCYRAGDPLPK 213
           +P+WV+   VP  YWT +GLS +AS +G PL AD  TL     S+A++CV   A   L K
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 299

Query: 214 TIPVTCLDPSGVRFTTDVGVTYPFKPLFCKGCESLGHSIAACPT 345
              + C  P+G+  T  +   Y + P  C  C   GH+ A C T
Sbjct: 300 EYDLRC--PNGLFIT--ISAEYEWIPSKCSNCNVFGHTTALCAT 339


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 40/104 (38%), Positives = 55/104 (52%)
 Frame = +1

Query: 34  LPLWVKFSQVPDCYWTREGLSFIASVIGRPLCADQVTLKLNPASFAKMCVCYRAGDPLPK 213
           +P+WV+   VP  YWT +GLS +AS +G PL AD  TL     S+A++CV   A   L K
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 299

Query: 214 TIPVTCLDPSGVRFTTDVGVTYPFKPLFCKGCESLGHSIAACPT 345
              + C  P+G+  T  +   Y + P  C  C   GH+ A C T
Sbjct: 300 EYDLRC--PNGLFIT--ISAEYEWIPSKCSNCNVFGHTTALCAT 339



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 40/104 (38%), Positives = 55/104 (52%)
 Frame = +1

Query: 34   LPLWVKFSQVPDCYWTREGLSFIASVIGRPLCADQVTLKLNPASFAKMCVCYRAGDPLPK 213
            +P+WV+   VP  YWT +GLS +AS +G PL AD  TL     S+A++CV   A   L K
Sbjct: 1033 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 1092

Query: 214  TIPVTCLDPSGVRFTTDVGVTYPFKPLFCKGCESLGHSIAACPT 345
               + C  P+G+  T  +   Y + P  C  C   GH+ A C T
Sbjct: 1093 EYDLRC--PNGLFIT--ISAEYEWIPSKCSNCNVFGHTTALCAT 1132


>emb|CCA65980.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 390

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
 Frame = +1

Query: 28  KTLPLWVKFSQVPDCYWTREGLSFIASVIGRPLCADQVTLKLNPASFAKMCVCYRAGDPL 207
           K +P+WVK   +P   W  + LS I SV+G PL AD+ T K    S+A+M V       +
Sbjct: 173 KVIPIWVKLPNLPLNCWGEDSLSRIGSVLGVPLYADECTSKGLRVSYARMLVEMDVTQEI 232

Query: 208 PKTIPVTCLDPSGVRFTTDVGVTYPFKPLFCKGCESLGHSIAACPTIKRV---WVKKGDL 378
           P T+ V   DP+GV F     + Y + P FCK C+ +GH+        RV   W+ K  +
Sbjct: 233 PITVAVE--DPNGVVFKQK--LEYDWVPHFCKKCQMVGHNCGGKSVTARVVQRWIPKQKV 288

Query: 379 P 381
           P
Sbjct: 289 P 289


>ref|XP_002336811.1| predicted protein [Populus trichocarpa] gi|222836943|gb|EEE75336.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 40/101 (39%), Positives = 53/101 (52%)
 Frame = +1

Query: 40  LWVKFSQVPDCYWTREGLSFIASVIGRPLCADQVTLKLNPASFAKMCVCYRAGDPLPKTI 219
           +WV+   VP  YWT +GLS +AS IG PL AD  TL     S+A++CV   A   L K  
Sbjct: 66  VWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLCKRLSYARVCVEIDASKTLVKEY 125

Query: 220 PVTCLDPSGVRFTTDVGVTYPFKPLFCKGCESLGHSIAACP 342
            + C  P+G+  T  +   Y + P  C  C   GH+ A CP
Sbjct: 126 DLRC--PNGLFIT--ISAEYEWIPSKCSDCNVFGHTTALCP 162


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