BLASTX nr result

ID: Bupleurum21_contig00030387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030387
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   108   5e-22
ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   108   5e-22
ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   107   1e-21
emb|CBI19293.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003544252.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   105   3e-21

>ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL2-like
            [Cucumis sativus]
          Length = 3666

 Score =  108 bits (270), Expect = 5e-22
 Identities = 62/86 (72%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6    FLDALPEELRAEVLXXXXXXXXXXXXTEPEPEPQHE-DIDPEFLAALPLDIREEVLAQQQ 182
            FLDALPEELRAEVL              P  EPQ+  DIDPEFLAALP DIR EVLAQQQ
Sbjct: 2582 FLDALPEELRAEVLSTQQGQVVQP----PSNEPQNAGDIDPEFLAALPPDIRAEVLAQQQ 2637

Query: 183  VQRIHQSRELEGQPVEMDTVSIIATF 260
             QR+HQS+ELEGQPVEMDTVSIIATF
Sbjct: 2638 AQRLHQSQELEGQPVEMDTVSIIATF 2663


>ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Cucumis sativus]
          Length = 3656

 Score =  108 bits (270), Expect = 5e-22
 Identities = 62/86 (72%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6    FLDALPEELRAEVLXXXXXXXXXXXXTEPEPEPQHE-DIDPEFLAALPLDIREEVLAQQQ 182
            FLDALPEELRAEVL              P  EPQ+  DIDPEFLAALP DIR EVLAQQQ
Sbjct: 2572 FLDALPEELRAEVLSTQQGQVVQP----PSNEPQNAGDIDPEFLAALPPDIRAEVLAQQQ 2627

Query: 183  VQRIHQSRELEGQPVEMDTVSIIATF 260
             QR+HQS+ELEGQPVEMDTVSIIATF
Sbjct: 2628 AQRLHQSQELEGQPVEMDTVSIIATF 2653


>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/85 (70%), Positives = 63/85 (74%)
 Frame = +3

Query: 6    FLDALPEELRAEVLXXXXXXXXXXXXTEPEPEPQHEDIDPEFLAALPLDIREEVLAQQQV 185
            FLDALPEELRAEVL            TE +      DIDPEFLAALP DIR EVLAQQQ 
Sbjct: 2660 FLDALPEELRAEVLSAQQGQVAQPSNTEQQ---NTGDIDPEFLAALPPDIRAEVLAQQQA 2716

Query: 186  QRIHQSRELEGQPVEMDTVSIIATF 260
            QR+HQS+ELEGQPVEMDTVSIIATF
Sbjct: 2717 QRLHQSQELEGQPVEMDTVSIIATF 2741


>emb|CBI19293.3| unnamed protein product [Vitis vinifera]
          Length = 1824

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/85 (70%), Positives = 63/85 (74%)
 Frame = +3

Query: 6    FLDALPEELRAEVLXXXXXXXXXXXXTEPEPEPQHEDIDPEFLAALPLDIREEVLAQQQV 185
            FLDALPEELRAEVL            TE +      DIDPEFLAALP DIR EVLAQQQ 
Sbjct: 780  FLDALPEELRAEVLSAQQGQVAQPSNTEQQ---NTGDIDPEFLAALPPDIRAEVLAQQQA 836

Query: 186  QRIHQSRELEGQPVEMDTVSIIATF 260
            QR+HQS+ELEGQPVEMDTVSIIATF
Sbjct: 837  QRLHQSQELEGQPVEMDTVSIIATF 861


>ref|XP_003544252.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3673

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/85 (69%), Positives = 62/85 (72%)
 Frame = +3

Query: 6    FLDALPEELRAEVLXXXXXXXXXXXXTEPEPEPQHEDIDPEFLAALPLDIREEVLAQQQV 185
            FLDALPEELRAEVL             E +      DIDPEFLAALP DIR EVLAQQQ 
Sbjct: 2600 FLDALPEELRAEVLSAQQGQVAQPSNVESQ---NTGDIDPEFLAALPADIRAEVLAQQQA 2656

Query: 186  QRIHQSRELEGQPVEMDTVSIIATF 260
            QR+HQS+ELEGQPVEMDTVSIIATF
Sbjct: 2657 QRLHQSQELEGQPVEMDTVSIIATF 2681


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