BLASTX nr result

ID: Bupleurum21_contig00030386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030386
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   176   5e-59
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              176   5e-59
ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2...   176   8e-58
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   169   3e-56
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   160   2e-53

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  176 bits (445), Expect(2) = 5e-59
 Identities = 81/108 (75%), Positives = 92/108 (85%)
 Frame = -1

Query: 326  QAGRAGRREKPSLAIYIAFEGPIDQYFFKFPHKLFRGPIECCHIDANNPQVLEQHLVCAA 147
            QAGR+GRRE+PSLAIY+AFEGP+DQYF KFP KLFR PIECCH+DA N QVLEQHLVCAA
Sbjct: 824  QAGRSGRRERPSLAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAA 883

Query: 146  YEHPLSLLHDEKHFGPGLEDAILTLKGKGHLSTDPSRESSGKIWCYIG 3
             EHPLSLL+DEK+FG GL  AI +L  +G+LS DPSR SS +IW YIG
Sbjct: 884  LEHPLSLLYDEKYFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIG 931



 Score = 77.4 bits (189), Expect(2) = 5e-59
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -2

Query: 445 SEFFEGKLLGVAATNALELGIDVGHIDVTLHLGFPGSISSKLEELG 308
           S+FF GKL G+AATNALELGIDVGHIDVTLHLGFPGSI+S  ++ G
Sbjct: 781 SDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAG 826


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  176 bits (445), Expect(2) = 5e-59
 Identities = 81/108 (75%), Positives = 92/108 (85%)
 Frame = -1

Query: 326  QAGRAGRREKPSLAIYIAFEGPIDQYFFKFPHKLFRGPIECCHIDANNPQVLEQHLVCAA 147
            QAGR+GRRE+PSLAIY+AFEGP+DQYF KFP KLFR PIECCH+DA N QVLEQHLVCAA
Sbjct: 775  QAGRSGRRERPSLAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAA 834

Query: 146  YEHPLSLLHDEKHFGPGLEDAILTLKGKGHLSTDPSRESSGKIWCYIG 3
             EHPLSLL+DEK+FG GL  AI +L  +G+LS DPSR SS +IW YIG
Sbjct: 835  LEHPLSLLYDEKYFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIG 882



 Score = 77.4 bits (189), Expect(2) = 5e-59
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -2

Query: 445 SEFFEGKLLGVAATNALELGIDVGHIDVTLHLGFPGSISSKLEELG 308
           S+FF GKL G+AATNALELGIDVGHIDVTLHLGFPGSI+S  ++ G
Sbjct: 732 SDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAG 777


>ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  176 bits (447), Expect(2) = 8e-58
 Identities = 79/108 (73%), Positives = 93/108 (86%)
 Frame = -1

Query: 326 QAGRAGRREKPSLAIYIAFEGPIDQYFFKFPHKLFRGPIECCHIDANNPQVLEQHLVCAA 147
           QAGR+GRRE+PSLA+Y+AF+GP+DQYF KFP KLF GPIECCHIDA N QVL+QHLVCAA
Sbjct: 56  QAGRSGRRERPSLAVYVAFQGPLDQYFMKFPKKLFHGPIECCHIDAQNQQVLKQHLVCAA 115

Query: 146 YEHPLSLLHDEKHFGPGLEDAILTLKGKGHLSTDPSRESSGKIWCYIG 3
            EHPLSLLHDEK+FG  L +A+++LK KG LS DPSR+S  +IW YIG
Sbjct: 116 REHPLSLLHDEKYFGSSLSNALMSLKNKGDLSFDPSRDSFARIWSYIG 163



 Score = 72.4 bits (176), Expect(2) = 8e-58
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = -2

Query: 442 EFFEGKLLGVAATNALELGIDVGHIDVTLHLGFPGSISSKLEELG 308
           +FF GKL G+AATNALELGIDVGHID TLHLGFPGS +S  ++ G
Sbjct: 14  DFFSGKLSGIAATNALELGIDVGHIDATLHLGFPGSFASLWQQAG 58


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1189

 Score =  169 bits (428), Expect(2) = 3e-56
 Identities = 76/108 (70%), Positives = 90/108 (83%)
 Frame = -1

Query: 326  QAGRAGRREKPSLAIYIAFEGPIDQYFFKFPHKLFRGPIECCHIDANNPQVLEQHLVCAA 147
            QAGR+GRREKPSLA+Y+AFEGP+DQYF K P KLF  PIECCH+DA N +VLEQHLVCAA
Sbjct: 777  QAGRSGRREKPSLAVYVAFEGPLDQYFMKHPKKLFNNPIECCHVDAQNEKVLEQHLVCAA 836

Query: 146  YEHPLSLLHDEKHFGPGLEDAILTLKGKGHLSTDPSRESSGKIWCYIG 3
             EHPL+L HDEK+FG GL  ++++LK KG+LS DPS  SS +IW YIG
Sbjct: 837  LEHPLNLPHDEKYFGSGLSKSLMSLKSKGYLSYDPSCGSSARIWSYIG 884



 Score = 74.3 bits (181), Expect(2) = 3e-56
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = -2

Query: 442 EFFEGKLLGVAATNALELGIDVGHIDVTLHLGFPGSISSKLEELG 308
           EFF G L G+AATNALELGIDVGHID TLHLGFPGSISS  ++ G
Sbjct: 735 EFFSGTLCGIAATNALELGIDVGHIDATLHLGFPGSISSLWQQAG 779


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  160 bits (406), Expect(2) = 2e-53
 Identities = 73/108 (67%), Positives = 87/108 (80%)
 Frame = -1

Query: 326  QAGRAGRREKPSLAIYIAFEGPIDQYFFKFPHKLFRGPIECCHIDANNPQVLEQHLVCAA 147
            QAGRAGRREK SL++Y+AFEGP+DQYF K P KLF  PIECCHIDA N QVLEQHL+CAA
Sbjct: 819  QAGRAGRREKTSLSVYVAFEGPLDQYFMKHPEKLFGSPIECCHIDAENQQVLEQHLLCAA 878

Query: 146  YEHPLSLLHDEKHFGPGLEDAILTLKGKGHLSTDPSRESSGKIWCYIG 3
            YEHP+ L +D+K FGPGL +A+++LK +G L  +PS  SS  IW YIG
Sbjct: 879  YEHPVCLAYDQKFFGPGLNNALMSLKNRGDLIPEPSCGSSKSIWNYIG 926



 Score = 73.6 bits (179), Expect(2) = 2e-53
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = -2

Query: 445 SEFFEGKLLGVAATNALELGIDVGHIDVTLHLGFPGSISSKLEELG 308
           S+FF G L GVAATNALELGIDVGHID TLHLGFPGSI+S  ++ G
Sbjct: 776 SDFFGGNLCGVAATNALELGIDVGHIDATLHLGFPGSIASLWQQAG 821