BLASTX nr result

ID: Bupleurum21_contig00030378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030378
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like...   178   5e-43
emb|CBI31084.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP...   170   1e-40
ref|XP_004134549.1| PREDICTED: protein CHUP1, chloroplastic-like...   170   1e-40
ref|XP_002533785.1| actin binding protein, putative [Ricinus com...   165   3e-39

>ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera]
          Length = 801

 Score =  178 bits (451), Expect = 5e-43
 Identities = 93/151 (61%), Positives = 110/151 (72%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   LNEVEELVYLRWVNSCLRSELRGLSSAS-SDQMSTPISVERSTEIVNLSSCQSDTDYECS 177
           LNEVEELVYLRWVNSCLR+ELR   S + SD+ S+P S+E S E  +  SCQ+D   E S
Sbjct: 288 LNEVEELVYLRWVNSCLRNELRNSCSVTNSDKTSSPNSIEGSRESDSSFSCQTDDSLEYS 347

Query: 178 STKRLNLVKKLKKWPITDEDLQNFESPGNLMERGWSDIQ---SPRRRHSISGAKYYVEDS 348
           S KRLNL+KKLKKWPI  EDL N + P NL+E+ W D +   SPRRRHSISG+K   ED 
Sbjct: 348 SIKRLNLIKKLKKWPIISEDLPNLDCPDNLLEKSWVDPEEGRSPRRRHSISGSKCSAEDL 407

Query: 349 AHNKRRQSDGFMCLKEVEKEADSLAPQNYEM 441
             +KRRQSDGFMC KE+EKEA+ L  Q YE+
Sbjct: 408 VQSKRRQSDGFMCPKEMEKEAEPLVSQKYEL 438


>emb|CBI31084.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score =  178 bits (451), Expect = 5e-43
 Identities = 93/151 (61%), Positives = 110/151 (72%), Gaps = 4/151 (2%)
 Frame = +1

Query: 1   LNEVEELVYLRWVNSCLRSELRGLSSAS-SDQMSTPISVERSTEIVNLSSCQSDTDYECS 177
           LNEVEELVYLRWVNSCLR+ELR   S + SD+ S+P S+E S E  +  SCQ+D   E S
Sbjct: 288 LNEVEELVYLRWVNSCLRNELRNSCSVTNSDKTSSPNSIEGSRESDSSFSCQTDDSLEYS 347

Query: 178 STKRLNLVKKLKKWPITDEDLQNFESPGNLMERGWSDIQ---SPRRRHSISGAKYYVEDS 348
           S KRLNL+KKLKKWPI  EDL N + P NL+E+ W D +   SPRRRHSISG+K   ED 
Sbjct: 348 SIKRLNLIKKLKKWPIISEDLPNLDCPDNLLEKSWVDPEEGRSPRRRHSISGSKCSAEDL 407

Query: 349 AHNKRRQSDGFMCLKEVEKEADSLAPQNYEM 441
             +KRRQSDGFMC KE+EKEA+ L  Q YE+
Sbjct: 408 VQSKRRQSDGFMCPKEMEKEAEPLVSQKYEL 438


>ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like
           [Cucumis sativus]
          Length = 787

 Score =  170 bits (430), Expect = 1e-40
 Identities = 92/152 (60%), Positives = 111/152 (73%), Gaps = 5/152 (3%)
 Frame = +1

Query: 1   LNEVEELVYLRWVNSCLRSELRGLS-SASSDQMSTPISVERSTEIVNLSSCQSDTDYECS 177
           LNEVEEL YLRWVNSCLRSELR  S SA+S   S+P  VERS+E +   S Q +   E S
Sbjct: 289 LNEVEELAYLRWVNSCLRSELRNSSPSANSGSPSSPQPVERSSEAIGSLSSQKEY-MEYS 347

Query: 178 STKRLNLVKKLKKWPITDEDLQNFE-SPGNLMERGWSDIQ---SPRRRHSISGAKYYVED 345
           S KR+NL+KKLKKWPITDEDL N + S  NL+++ W D +   SPRRRHSISGAK + E+
Sbjct: 348 SAKRINLIKKLKKWPITDEDLSNLDCSDNNLLDKNWVDTEEGRSPRRRHSISGAKCWPEE 407

Query: 346 SAHNKRRQSDGFMCLKEVEKEADSLAPQNYEM 441
              NKRRQSDGFMC KE+EK+ D L+ Q Y++
Sbjct: 408 LEPNKRRQSDGFMCAKEMEKDVDPLSSQKYDL 439


>ref|XP_004134549.1| PREDICTED: protein CHUP1, chloroplastic-like [Cucumis sativus]
          Length = 787

 Score =  170 bits (430), Expect = 1e-40
 Identities = 92/152 (60%), Positives = 111/152 (73%), Gaps = 5/152 (3%)
 Frame = +1

Query: 1   LNEVEELVYLRWVNSCLRSELRGLS-SASSDQMSTPISVERSTEIVNLSSCQSDTDYECS 177
           LNEVEEL YLRWVNSCLRSELR  S SA+S   S+P  VERS+E +   S Q +   E S
Sbjct: 289 LNEVEELAYLRWVNSCLRSELRNSSPSANSGSPSSPQPVERSSEAIGSLSSQKEY-MEYS 347

Query: 178 STKRLNLVKKLKKWPITDEDLQNFE-SPGNLMERGWSDIQ---SPRRRHSISGAKYYVED 345
           S KR+NL+KKLKKWPITDEDL N + S  NL+++ W D +   SPRRRHSISGAK + E+
Sbjct: 348 SAKRINLIKKLKKWPITDEDLSNLDCSDNNLLDKNWVDTEEGRSPRRRHSISGAKCWPEE 407

Query: 346 SAHNKRRQSDGFMCLKEVEKEADSLAPQNYEM 441
              NKRRQSDGFMC KE+EK+ D L+ Q Y++
Sbjct: 408 LEPNKRRQSDGFMCAKEMEKDVDPLSSQKYDL 439


>ref|XP_002533785.1| actin binding protein, putative [Ricinus communis]
           gi|223526286|gb|EEF28598.1| actin binding protein,
           putative [Ricinus communis]
          Length = 791

 Score =  165 bits (418), Expect = 3e-39
 Identities = 88/149 (59%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
 Frame = +1

Query: 1   LNEVEELVYLRWVNSCLRSELRGLSSASSDQMSTPISVERSTEIVNLSSCQSDTDYECSS 180
           LNEVEEL YLRWVNSCLR ELR   S SSD+ S   S ERS + VN  S  S+   E SS
Sbjct: 298 LNEVEELAYLRWVNSCLRDELRNSCSISSDKASGLNSAERSNDSVN--SFSSNEYLEYSS 355

Query: 181 TKRLNLVKKLKKWPITDEDLQNFESPGNLMERGW---SDIQSPRRRHSISGAKYYVEDSA 351
            KRLNL+KKLKKWPIT+EDL N E P    ++ W    +++SPRRRHSISG+K+ +E+  
Sbjct: 356 AKRLNLIKKLKKWPITNEDLPNLECP----DKNWVHSEELRSPRRRHSISGSKFSIEELV 411

Query: 352 HNKRRQSDGFMCLKEVEKEADSLAPQNYE 438
            +KRRQSDGFMC+KEVEKE + L+ Q Y+
Sbjct: 412 SSKRRQSDGFMCIKEVEKETEPLSSQKYD 440


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