BLASTX nr result
ID: Bupleurum21_contig00030376
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030376
(713 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi... 373 e-101
ref|XP_002307403.1| predicted protein [Populus trichocarpa] gi|2... 360 1e-97
ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containi... 354 9e-96
ref|XP_002513855.1| pentatricopeptide repeat-containing protein,... 353 1e-95
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l... 347 2e-93
>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
[Vitis vinifera]
Length = 595
Score = 373 bits (958), Expect = e-101
Identities = 181/237 (76%), Positives = 210/237 (88%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
KRNTV+WTS+IAGYARNG GEEAI+LFRVM+RRKI ANNLT+VS+L+ACG +NL+ GKE
Sbjct: 327 KRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANNLTVVSILRACGSTRNLLMGKE 386
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+HAQI+KN + N+Y+GS+LVW YCKC E+ A VLQ +PL+DVVSWTA+ISG LGH
Sbjct: 387 VHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGH 446
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
E EALE+LKEML EGVEPN FTYSSAL+ACA ++ I QGKLIHSSVNKT ALSNV+VGS+
Sbjct: 447 EPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLIHSSVNKTLALSNVFVGSA 506
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
LINMYAKCGYVSEAIQ+FDSMP+RNLVSWKAMI+ YA+NG CGEALKLMYRMQAEGI
Sbjct: 507 LINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNGLCGEALKLMYRMQAEGI 563
Score = 175 bits (444), Expect = 7e-42
Identities = 89/237 (37%), Positives = 141/237 (59%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+RN VSWT+++ GY+R G +EA+ LF + AN T V VL C + G++
Sbjct: 126 ERNVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQ 185
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+HA I+K+ NL + S+LV Y +CG+ S A++ +P +DVV WT MI+ C++ G
Sbjct: 186 IHACIVKDNWR-NLIVDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGR 244
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
+EAL +M+ PN FT S L+AC + + + GK +H ++ K +V++G+S
Sbjct: 245 GTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGTS 304
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L+ MYAKCG + ++ ++FD M +RN V+W ++I YA+NG EA+ L M+ I
Sbjct: 305 LVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKI 361
Score = 174 bits (442), Expect = 1e-41
Identities = 90/237 (37%), Positives = 136/237 (57%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+R+ V WT+MI ++ G G EA+++F M S N T+ SVLKACG K L GK+
Sbjct: 226 ERDVVCWTTMITACSQQGRGTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQ 285
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+H IIK ++++G+SLV +Y KCGE + V G+ ++ V+WT++I+G AR G
Sbjct: 286 LHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQ 345
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EA+ + M + N T S LRAC +N+ GK +H+ + K SN+Y+GS+
Sbjct: 346 GEEAISLFRVMKRRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGST 405
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L+ Y KC A ++ +MP R++VSW A+I Y G EAL+ + M EG+
Sbjct: 406 LVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEMLEEGV 462
Score = 110 bits (274), Expect = 4e-22
Identities = 56/153 (36%), Positives = 87/153 (56%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
R+ VSWT++I+GY G EA+ + M + N T S LKAC + ++ GK +
Sbjct: 429 RDVVSWTAIISGYTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAILQGKLI 488
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
H+ + K N+++GS+L+ +Y KCG S A V +P +++VSW AMI G AR G
Sbjct: 489 HSSVNKTLALSNVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNGLC 548
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQ 463
EAL+ + M EG+E + + ++ L AC V+
Sbjct: 549 GEALKLMYRMQAEGIEVDDYILTTVLSACGDVE 581
Score = 105 bits (262), Expect = 9e-21
Identities = 58/174 (33%), Positives = 95/174 (54%)
Frame = +2
Query: 176 KEMHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARL 355
+ +HA + K + Y+ ++L+ Y + G+ A V +P ++VVSWTA+++G +R
Sbjct: 83 RRVHAVVFKCLDNSVTYVNNNLISAYSRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRY 142
Query: 356 GHESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVG 535
G + EAL + + GV N T+ L C+K + G+ IH+ + K N+ V
Sbjct: 143 GFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELGRQIHACIVK-DNWRNLIVD 201
Query: 536 SSLINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRM 697
S+L+ YA+CG +S A FD MPER++V W MI ++ G EAL + +M
Sbjct: 202 SALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGRGTEALSMFSQM 255
>ref|XP_002307403.1| predicted protein [Populus trichocarpa] gi|222856852|gb|EEE94399.1|
predicted protein [Populus trichocarpa]
Length = 472
Score = 360 bits (925), Expect = 1e-97
Identities = 173/237 (72%), Positives = 206/237 (86%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+RNTV+WTS+IAGYAR GLGEEAI LFR+M RR++ +NNLT+VS+L+ACGL L+ G+E
Sbjct: 204 RRNTVTWTSIIAGYARKGLGEEAICLFRLMMRRRVVSNNLTIVSMLRACGLIGALLAGRE 263
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+HAQIIKNC N YLGS+LVW YCKCGE TA VLQ +P +DVVSWTA+ISG A LGH
Sbjct: 264 VHAQIIKNCSQSNEYLGSTLVWFYCKCGESRTASKVLQQMPFRDVVSWTAIISGHACLGH 323
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
ESEALE+LKEM+ EGVEPN+FTYSSAL+ACA ++ + QGKLIHSS NKTPA SNV+VGS+
Sbjct: 324 ESEALEFLKEMMEEGVEPNSFTYSSALKACANLETVLQGKLIHSSANKTPASSNVFVGSA 383
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
LI+MYA+CGYVSEAIQ+FDSMPERNLV+W+AMI+ Y +NG C EALKLMYRMQAEGI
Sbjct: 384 LIHMYARCGYVSEAIQVFDSMPERNLVTWRAMIMGYVRNGLCQEALKLMYRMQAEGI 440
Score = 170 bits (431), Expect = 2e-40
Identities = 89/232 (38%), Positives = 140/232 (60%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+RN VSWT+MI GY + GL +EA++ F + + N+ T V VL C + G++
Sbjct: 3 ERNVVSWTAMINGYFKFGLDDEALSYFSQAIKDGVVPNSKTFVCVLNLCSRRLDFELGRQ 62
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+HA+++K NL + S++V+ Y +CG+ +A+ V + +DVVSWT MI+ C++ G
Sbjct: 63 VHARVVKGNWR-NLIVDSAVVYFYVQCGDLKSAFCVFDRMVERDVVSWTTMITACSQQGR 121
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EA +ML G PN FT S L+AC + + + GK IH ++ K +V+VG+S
Sbjct: 122 CGEAFGMFTQMLNGGFLPNGFTASGILKACGEEKALKFGKQIHGAIVKKMYKDDVFVGTS 181
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRM 697
L++MYAKCG VS++ ++F+ M RN V+W ++I YA+ G EA+ L M
Sbjct: 182 LVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAGYARKGLGEEAICLFRLM 233
Score = 161 bits (408), Expect = 1e-37
Identities = 87/237 (36%), Positives = 133/237 (56%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+R+ VSWT+MI ++ G EA +F M N T +LKACG K L GK+
Sbjct: 103 ERDVVSWTTMITACSQQGRCGEAFGMFTQMLNGGFLPNGFTASGILKACGEEKALKFGKQ 162
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+H I+K ++++G+SLV +Y KCGE S + V G+ ++ V+WT++I+G AR G
Sbjct: 163 IHGAIVKKMYKDDVFVGTSLVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAGYARKGL 222
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EA+ + M+ V N T S LRAC + + G+ +H+ + K + SN Y+GS+
Sbjct: 223 GEEAICLFRLMMRRRVVSNNLTIVSMLRACGLIGALLAGREVHAQIIKNCSQSNEYLGST 282
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L+ Y KCG A ++ MP R++VSW A+I +A G EAL+ + M EG+
Sbjct: 283 LVWFYCKCGESRTASKVLQQMPFRDVVSWTAIISGHACLGHESEALEFLKEMMEEGV 339
Score = 104 bits (260), Expect = 2e-20
Identities = 51/153 (33%), Positives = 87/153 (56%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
R+ VSWT++I+G+A G EA+ + M + N+ T S LKAC + ++ GK +
Sbjct: 306 RDVVSWTAIISGHACLGHESEALEFLKEMMEEGVEPNSFTYSSALKACANLETVLQGKLI 365
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
H+ K N+++GS+L+ +Y +CG S A V +P +++V+W AMI G R G
Sbjct: 366 HSSANKTPASSNVFVGSALIHMYARCGYVSEAIQVFDSMPERNLVTWRAMIMGYVRNGLC 425
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQ 463
EAL+ + M EG++ + + + L AC +++
Sbjct: 426 QEALKLMYRMQAEGIQVDDYISAKVLGACGEIE 458
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/133 (36%), Positives = 79/133 (59%)
Frame = +2
Query: 299 LPLKDVVSWTAMISGCARLGHESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQG 478
+P ++VVSWTAMI+G + G + EAL Y + + +GV PN+ T+ L C++ + G
Sbjct: 1 MPERNVVSWTAMINGYFKFGLDDEALSYFSQAIKDGVVPNSKTFVCVLNLCSRRLDFELG 60
Query: 479 KLIHSSVNKTPALSNVYVGSSLINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKN 658
+ +H+ V K N+ V S+++ Y +CG + A +FD M ER++VSW MI ++
Sbjct: 61 RQVHARVVK-GNWRNLIVDSAVVYFYVQCGDLKSAFCVFDRMVERDVVSWTTMITACSQQ 119
Query: 659 GFCGEALKLMYRM 697
G CGEA + +M
Sbjct: 120 GRCGEAFGMFTQM 132
>ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
[Cucumis sativus] gi|449490224|ref|XP_004158542.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
Length = 619
Score = 354 bits (909), Expect = 9e-96
Identities = 168/235 (71%), Positives = 203/235 (86%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
RNTV+WTS+IAGYAR GLGEEA+NLFR+M+R++I ANNLT+VS+L+ACG + +TG+E+
Sbjct: 352 RNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREV 411
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
HAQI+KN N+++GS+LVW YCKC A VLQ +PL+DVVSWTA+ISGCA LGHE
Sbjct: 412 HAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHE 471
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSSL 544
SEALE+LK M+ EGVEPN+FTYSS L+ACAK++ + QGK+IHSS NKT ALSNV+VGS+L
Sbjct: 472 SEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSAL 531
Query: 545 INMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEG 709
I MYAKCGYV+EA Q+FDSMP RNLVSWKAMILCYA+NG C EALKLMYRMQAEG
Sbjct: 532 IYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEG 586
Score = 165 bits (417), Expect = 1e-38
Identities = 86/237 (36%), Positives = 137/237 (57%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+R+ V WTSMI ++ GLG EAI++F M + N ++ SVLKACG + L G++
Sbjct: 250 RRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQ 309
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+H IIK I ++++G+SLV +Y KCG + + V G+ ++ V+WT++I+G AR G
Sbjct: 310 LHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGL 369
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EAL + M + + N T S LRAC ++ G+ +H+ + K +N+++GS+
Sbjct: 370 GEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGST 429
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L+ Y KC +A + MP R++VSW A+I A G EAL+ + M EG+
Sbjct: 430 LVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGV 486
Score = 159 bits (402), Expect = 5e-37
Identities = 81/236 (34%), Positives = 138/236 (58%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
R+ V+WT++I GY L EEA+ LF + + AN V +L C + G+++
Sbjct: 151 RSVVTWTAIINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQI 210
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
H I+K GNL + S++++ Y +C + S+A+ + + +DVV WT+MI+ C++ G
Sbjct: 211 HGVIVKGN-RGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLG 269
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSSL 544
EA+ ML + PN F+ S L+AC + + + G+ +H + K ++V+VG+SL
Sbjct: 270 REAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSL 329
Query: 545 INMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
++MYAKCG ++++ ++FD M RN V+W ++I YA+ G EAL L M+ + I
Sbjct: 330 VDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRI 385
Score = 101 bits (252), Expect = 1e-19
Identities = 53/153 (34%), Positives = 85/153 (55%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
R+ VSWT++I+G A G EA+ + M + N+ T S LKAC + ++ GK +
Sbjct: 453 RDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMI 512
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
H+ K N+++GS+L+++Y KCG + A V +P++++VSW AMI AR G
Sbjct: 513 HSSANKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLC 572
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQ 463
EAL+ + M EG E + + + AC V+
Sbjct: 573 REALKLMYRMQAEGFEVDDYILGTVYGACGDVK 605
Score = 91.3 bits (225), Expect = 2e-16
Identities = 54/177 (30%), Positives = 91/177 (51%)
Frame = +2
Query: 176 KEMHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARL 355
+ +HA I++N +Y+G++L+ Y + G A V +P++ VV+WTA+I+G L
Sbjct: 107 RAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 166
Query: 356 GHESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVG 535
EAL + + GV N + L CAK + G+ IH + K N+ V
Sbjct: 167 DLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNR-GNLIVD 225
Query: 536 SSLINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAE 706
S++I YA+C +S A F+ M R++V W +MI ++ G EA+ + M ++
Sbjct: 226 SAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSD 282
>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 498
Score = 353 bits (907), Expect = 1e-95
Identities = 171/237 (72%), Positives = 203/237 (85%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
KRNTV+WTS+IAGYAR GLGEEAI LFRVM+RRKI +NNLT+VSVL+ACG +TG+E
Sbjct: 230 KRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGRE 289
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+HAQIIK+ I N+YLGS+LVW YCKCGE++ A VLQ + ++VVSWTAMISG LG+
Sbjct: 290 VHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGY 349
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
E EALE+LKEM+ EGVEPN FTYSSAL+ACA ++++ QGKLIHS NKTPA SNVYVGS+
Sbjct: 350 EFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSA 409
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
LI MY+KCGY+S+AIQ+FDSMPERNL+SWK MIL YA+NG C EALKLMYRMQAEGI
Sbjct: 410 LIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLCREALKLMYRMQAEGI 466
Score = 172 bits (435), Expect = 8e-41
Identities = 87/237 (36%), Positives = 142/237 (59%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+R VSWT+MI GY GL +EA+ LF + ++ANN T V +L C + G++
Sbjct: 29 ERCVVSWTAMINGYVSFGLDDEALRLFSELIENGVTANNRTFVCILNVCSKRLDFELGRQ 88
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+HA ++K NL + S++V Y +CG+ +A+ + KDVV WT++IS C++ G
Sbjct: 89 IHACVVKGNWR-NLIVDSAIVSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQQGR 147
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EA +MLGEG PN FT + L+AC + + + G+ +H ++ K +V++G+S
Sbjct: 148 GEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTS 207
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L++MYAKCG + ++ ++FD M +RN V+W ++I YA+ G EA++L M+ I
Sbjct: 208 LVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKI 264
Score = 167 bits (422), Expect = 3e-39
Identities = 86/237 (36%), Positives = 135/237 (56%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+++ V WTS+I+ ++ G GEEA +F M N T+ ++LKACG K L G++
Sbjct: 129 EKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQ 188
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+H I+K ++++G+SLV +Y KCGE + V G+ ++ V+WT++I+G AR G
Sbjct: 189 LHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGL 248
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EA+ + M + N T S LRAC + G+ +H+ + K+ SNVY+GS+
Sbjct: 249 GEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGST 308
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L+ Y KCG + A ++ M RN+VSW AMI Y G+ EAL+ + M EG+
Sbjct: 309 LVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGV 365
Score = 110 bits (276), Expect = 2e-22
Identities = 56/152 (36%), Positives = 86/152 (56%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
RN VSWT+MI+GY G EA+ + M + N T S LKAC ++++ GK +
Sbjct: 332 RNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLI 391
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
H+ K N+Y+GS+L+++Y KCG S A V +P ++++SW MI AR G
Sbjct: 392 HSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLC 451
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKV 460
EAL+ + M EG+E + + Y+S + +C V
Sbjct: 452 REALKLMYRMQAEGIEVDDYIYASVMGSCGDV 483
Score = 92.0 bits (227), Expect = 1e-16
Identities = 52/163 (31%), Positives = 88/163 (53%)
Frame = +2
Query: 221 LYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHESEALEYLKEMLG 400
+Y+ ++L+ +Y + GE A V + + VVSWTAMI+G G + EAL E++
Sbjct: 1 MYVDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIE 60
Query: 401 EGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSSLINMYAKCGYVSE 580
GV N T+ L C+K + G+ IH+ V K N+ V S++++ YA+CG +
Sbjct: 61 NGVTANNRTFVCILNVCSKRLDFELGRQIHACVVK-GNWRNLIVDSAIVSFYAQCGDLES 119
Query: 581 AIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEG 709
A F + E+++V W ++I ++ G EA ++ +M EG
Sbjct: 120 AFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEG 162
>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 616
Score = 347 bits (889), Expect = 2e-93
Identities = 166/235 (70%), Positives = 201/235 (85%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
RNTV+WTS+IA +AR G GEEAI+LFRVM+RR + ANNLT+VS+L+ACG L+ GKE+
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRVMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
HAQIIKN I N+Y+GS+LVWLYCKCGE A+NVLQ LP +DVVSWTAMISGC+ LGHE
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSSL 544
SEAL++LKEM+ EGVEPN FTYSSAL+ACA +++ G+ IHS K ALSNV+VGS+L
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 545 INMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEG 709
I+MYAKCG+VSEA ++FDSMPE+NLVSWKAMI+ YA+NGFC EALKLMYRM+AEG
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Score = 179 bits (453), Expect = 6e-43
Identities = 95/233 (40%), Positives = 143/233 (61%), Gaps = 1/233 (0%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTM-VSVLKACGLAKNLVTGKE 181
RNTV+WT+MI GY + GL +EA +LF + I N M V +L C G++
Sbjct: 146 RNTVTWTAMIDGYLKFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFELGRQ 205
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+H ++K + GNL + SSLV+ Y +CGE ++A + KDV+SWTA+IS C+R GH
Sbjct: 206 VHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
++A+ ML G PN FT S L+AC++ + I G+ +HS V K ++V+VG+S
Sbjct: 265 GNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTS 324
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQ 700
L++MYAKCG +S+ ++FD M RN V+W ++I +A+ GF EA+ L M+
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRVMK 377
Score = 160 bits (404), Expect = 3e-37
Identities = 82/237 (34%), Positives = 134/237 (56%)
Frame = +2
Query: 2 KRNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKE 181
+++ +SWT++I+ +R G G +AI +F M N T+ S+LKAC K + G++
Sbjct: 246 EKDVISWTAVISACSRKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQ 305
Query: 182 MHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGH 361
+H+ ++K I ++++G+SL+ +Y KCGE S V G+ ++ V+WT++I+ AR G
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 362 ESEALEYLKEMLGEGVEPNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYVGSS 541
EA+ + M + N T S LRAC V + GK +H+ + K NVY+GS+
Sbjct: 366 GEEAISLFRVMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425
Query: 542 LINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEGI 712
L+ +Y KCG +A + +P R++VSW AMI + G EAL + M EG+
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Score = 111 bits (278), Expect = 1e-22
Identities = 56/153 (36%), Positives = 91/153 (59%)
Frame = +2
Query: 5 RNTVSWTSMIAGYARNGLGEEAINLFRVMRRRKISANNLTMVSVLKACGLAKNLVTGKEM 184
R+ VSWT+MI+G + G EA++ + M + + N T S LKAC +++L+ G+ +
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 185 HAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARLGHE 364
H+ KN N+++GS+L+ +Y KCG S A+ V +P K++VSW AMI G AR G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 365 SEALEYLKEMLGEGVEPNTFTYSSALRACAKVQ 463
EAL+ + M EG E + + +++ L C ++
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
Score = 92.4 bits (228), Expect = 8e-17
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +2
Query: 176 KEMHAQIIKNCIHGNLYLGSSLVWLYCKCGEYSTAYNVLQGLPLKDVVSWTAMISGCARL 355
K +HA +K +Y G++L+ + G+ A V +P ++ V+WTAMI G +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGYLKF 161
Query: 356 GHESEALEYLKEMLGEGVE-PNTFTYSSALRACAKVQNIWQGKLIHSSVNKTPALSNVYV 532
G E EA ++ + G+ N + L C++ G+ +H ++ K + N+ V
Sbjct: 162 GLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFELGRQVHGNMVKV-GVGNLIV 220
Query: 533 GSSLINMYAKCGYVSEAIQIFDSMPERNLVSWKAMILCYAKNGFCGEALKLMYRMQAEG 709
SSL+ YA+CG ++ A++ FD M E++++SW A+I ++ G +A+ + M G
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIFMFIGMLNHG 279