BLASTX nr result

ID: Bupleurum21_contig00030373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030373
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    65   8e-09
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    64   1e-08

>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/81 (43%), Positives = 45/81 (55%)
 Frame = -2

Query: 294 WTMPKENKTKVNTDASIFQAYNCYSFALVARNHRGDLIEARSSCKSGSMAPECAEAMGIR 115
           W  P     K+N DA IFQA N   + +V RNH  +L+ AR+    G      AEAM +R
Sbjct: 53  WRKPHNEYLKINEDAGIFQAQNRTGYGMVVRNHAANLVAARALIIHGVYEANLAEAMAVR 112

Query: 114 EALSWIKESRLSDVTLETDCL 52
           EALSWIK    S V+++ D L
Sbjct: 113 EALSWIKHMNWSRVSIDMDSL 133


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/98 (36%), Positives = 48/98 (48%)
 Frame = -2

Query: 294 WTMPKENKTKVNTDASIFQAYNCYSFALVARNHRGDLIEARSSCKSGSMAPECAEAMGIR 115
           WT P E   K N D  +F A N   F  + +N  G    A +   SG + P+ AEA+ +R
Sbjct: 129 WTCPVEGWLKCNIDVVVFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLR 188

Query: 114 EALSWIKESRLSDVTLETDCLVAVQAIRGTITMLSYFG 1
           E L W+K   L+ V  E+DCL  V A+       S FG
Sbjct: 189 EDLCWVKGLDLNYVVSESDCLTLVNAVNKVGVNSSLFG 226


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = -2

Query: 294 WTMPKENKTKVNTDASIFQAYNCYSFALVARNHRGDLIEARSSCKSGSMAPECAEAMGIR 115
           W  P     K N DA+IF   N +   +  R+ RG  ++A ++   G   P+ AEA+G+R
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLR 116

Query: 114 EALSWIKESRLSDVTLETDCLVAVQAI 34
           +A+ W+ +  LS+V LE DC + V +I
Sbjct: 117 DAILWLGQLELSNVQLELDCKLVVDSI 143


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/87 (36%), Positives = 48/87 (55%)
 Frame = -2

Query: 294 WTMPKENKTKVNTDASIFQAYNCYSFALVARNHRGDLIEARSSCKSGSMAPECAEAMGIR 115
           W  P     KVN DA+IF   +      V ++H G  + A +   +G+  PE AE + I+
Sbjct: 28  WNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQ 87

Query: 114 EALSWIKESRLSDVTLETDCLVAVQAI 34
           EALSW ++ +L +V  E DCL  V+A+
Sbjct: 88  EALSWARDRQLLNVVFELDCLHIVEAL 114


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/89 (35%), Positives = 48/89 (53%)
 Frame = -2

Query: 297  QWTMPKENKTKVNTDASIFQAYNCYSFALVARNHRGDLIEARSSCKSGSMAPECAEAMGI 118
            +W  P E    +NTDA++FQ+ N +    + R+H G  + A +   SG + PE AEA+ I
Sbjct: 781  RWRPPPEGTILINTDAAVFQSVNSFGLGFLFRDHSGLCLFAANERHSGCIQPEMAEALAI 840

Query: 117  REALSWIKESRLSDVTLETDCLVAVQAIR 31
            R AL    E     + L +DCL  +Q I+
Sbjct: 841  RCALRTAMEEGHQKIVLASDCLAIIQKIQ 869


Top