BLASTX nr result

ID: Bupleurum21_contig00030362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030362
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis...   170   2e-40
ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002527472.1| zinc finger protein, putative [Ricinus commu...   154   1e-35
ref|NP_001236623.1| uncharacterized protein LOC100306296 [Glycin...   147   1e-33

>ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 189

 Score =  170 bits (431), Expect = 2e-40
 Identities = 87/162 (53%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
 Frame = -3

Query: 579 ETRKELHDEDTPREWLKLSVGGD----QVEDYDLSRRNPTKIYSCNFCMRKFYSSQALGG 412
           E   E  +ED P EWL LS+G +     ++    SR   +K++SCNFCMRKFYSSQALGG
Sbjct: 23  ENGDEGAEEDNPGEWLNLSLGRNLPSTALDSDPQSRPTSSKVFSCNFCMRKFYSSQALGG 82

Query: 411 HQNAHKRERSAARRNQSRTMTTMMALPM---MRSLGVQAHSLVQKPDREGIPVSARFSEP 241
           HQNAHKRER AARR QS  M  MM LPM   +RSLGV+ HSLVQKP+R+G  + ARF + 
Sbjct: 83  HQNAHKRERGAARRYQSHRMMAMMGLPMNTPIRSLGVRPHSLVQKPNRDGTAIVARFDDS 142

Query: 240 NAECGMAWVPITLDRTTDNMWPGSFYLDSEQPEERFQTHKVD 115
           N   GM W P TL+ T D MWPGS+ L+ +  E+  +  K+D
Sbjct: 143 NTGFGMTWTPFTLEETMDVMWPGSYRLEQQPSEQTSEPLKLD 184


>ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|222849567|gb|EEE87114.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  167 bits (424), Expect = 1e-39
 Identities = 86/159 (54%), Positives = 108/159 (67%), Gaps = 8/159 (5%)
 Frame = -3

Query: 567 ELHDEDTPREWLKLSVGGDQVE---DYDL-SRRNPTKIYSCNFCMRKFYSSQALGGHQNA 400
           E ++++ P EWL L +GG+      DYD  SR   +K++SCNFC RKF+SSQALGGHQNA
Sbjct: 27  EGYNDNNPGEWLNLRLGGNSPSTAGDYDSQSRPTSSKVFSCNFCRRKFFSSQALGGHQNA 86

Query: 399 HKRERSAARRNQSRTMTTMMAL----PMMRSLGVQAHSLVQKPDREGIPVSARFSEPNAE 232
           HKRER AARR  S+ M TMM L    PM RSLGV+ H+LV KP R+G P+  RF+E N  
Sbjct: 87  HKRERGAARRYHSQRMMTMMGLPINSPMARSLGVRPHALVHKPTRDGTPIGGRFNEANPG 146

Query: 231 CGMAWVPITLDRTTDNMWPGSFYLDSEQPEERFQTHKVD 115
             M+W+P  LD T D  WPGSF LDS+ PE   ++ K+D
Sbjct: 147 FVMSWMPFALDDTADLTWPGSFRLDSQLPETSSESLKLD 185


>ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|222846015|gb|EEE83562.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  167 bits (423), Expect = 2e-39
 Identities = 85/159 (53%), Positives = 110/159 (69%), Gaps = 8/159 (5%)
 Frame = -3

Query: 567 ELHDEDTPREWLKLSVGGDQVE---DYDL-SRRNPTKIYSCNFCMRKFYSSQALGGHQNA 400
           E +D++ P EWL LS+GG+      DYD  SR   +K++SCNFC RKF+SSQALGGHQNA
Sbjct: 83  EGYDDNNPGEWLNLSLGGNSPSTAGDYDSQSRPTSSKVFSCNFCRRKFFSSQALGGHQNA 142

Query: 399 HKRERSAARRNQSRTMTTMMAL----PMMRSLGVQAHSLVQKPDREGIPVSARFSEPNAE 232
           HKRER AARR  S+ M T+M L    PM RSLGV+ H+LV KP+R+G  ++ RF+E +  
Sbjct: 143 HKRERGAARRYHSQRMMTIMGLPVNSPMARSLGVRPHTLVHKPNRDGTAIAGRFNEASPG 202

Query: 231 CGMAWVPITLDRTTDNMWPGSFYLDSEQPEERFQTHKVD 115
             M+W+P T+D TTD  WPGSF LD + PE   +  K+D
Sbjct: 203 FDMSWMPFTVDDTTDLTWPGSFRLDPQPPETSSEPLKLD 241


>ref|XP_002527472.1| zinc finger protein, putative [Ricinus communis]
           gi|223533112|gb|EEF34870.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 204

 Score =  154 bits (389), Expect = 1e-35
 Identities = 85/166 (51%), Positives = 105/166 (63%), Gaps = 18/166 (10%)
 Frame = -3

Query: 558 DEDTPREWLKLSVGGDQVE-----------DYDL-SRRNPTKIYSCNFCMRKFYSSQALG 415
           +E  P EWL LS+GG+ +            DYDL SR   +K++SCNFC RKFYSSQALG
Sbjct: 34  EESNPGEWLNLSLGGNSMSAAGDSSLSTAGDYDLQSRPTSSKVFSCNFCRRKFYSSQALG 93

Query: 414 GHQNAHKRERSAARRNQSRTMTTMMALPMM----RSLGVQAHSLVQKPDRE--GIPVSAR 253
           GHQNAHKRER AARR  S+ M T+M  PM     RSLGV+ H+LV K  RE  G  V+ R
Sbjct: 94  GHQNAHKRERGAARRYHSQRMMTIMGFPMSTPVGRSLGVRPHALVHKTSREGTGTTVAPR 153

Query: 252 FSEPNAECGMAWVPITLDRTTDNMWPGSFYLDSEQPEERFQTHKVD 115
           F+E N   GMA +P TL+   D MWPGSF  D++ PE   +  ++D
Sbjct: 154 FNEVNGGFGMACLPFTLEDAMDLMWPGSFRFDAQPPEPPSEPLELD 199


>ref|NP_001236623.1| uncharacterized protein LOC100306296 [Glycine max]
           gi|255628135|gb|ACU14412.1| unknown [Glycine max]
          Length = 188

 Score =  147 bits (372), Expect = 1e-33
 Identities = 79/153 (51%), Positives = 97/153 (63%), Gaps = 5/153 (3%)
 Frame = -3

Query: 558 DEDTPREWLKLSVGGDQVEDYDLSRRNPTKIYSCNFCMRKFYSSQALGGHQNAHKRERSA 379
           ++D  +EWL LS+GG              K++SCNFCMRKF+SSQALGGHQNAHKRER A
Sbjct: 31  EDDNSKEWLNLSIGGTTTLLSTAVPPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGA 90

Query: 378 ARRNQS-RTMT----TMMALPMMRSLGVQAHSLVQKPDREGIPVSARFSEPNAECGMAWV 214
           ARR QS R+M     +M  L M RSLGVQ HSLV KP R+GI V+  F +  A  GMAW 
Sbjct: 91  ARRYQSQRSMAIMGFSMNTLTMCRSLGVQPHSLVHKPCRDGIMVAPSFHDAYARIGMAWT 150

Query: 213 PITLDRTTDNMWPGSFYLDSEQPEERFQTHKVD 115
           P   +   D +WPGSF L  +QP+   +  K+D
Sbjct: 151 PFWTEDQADMVWPGSFRLVPKQPQSPQEPLKLD 183


Top