BLASTX nr result

ID: Bupleurum21_contig00030344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030344
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29732.3| unnamed protein product [Vitis vinifera]              101   5e-20
ref|XP_002264141.1| PREDICTED: serine/threonine-protein kinase-l...   101   5e-20
gb|ABR18424.1| unknown [Picea sitchensis]                              86   2e-15
ref|NP_001238464.1| serine/threonine protein kinase [Glycine max...    77   1e-12
ref|XP_002328767.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>emb|CBI29732.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/75 (66%), Positives = 62/75 (82%)
 Frame = +1

Query: 79  ATQNFSPTNLIGKGSHGCVYKGVLKDGTIVAIKKQSLGLQKLQDNSKLDNEVCILSKLPK 258
           ATQ FSPT+LIGKGSHG VYKG L+DG +VAIKK S GLQ L+DN+K+DNE+ +LS LP+
Sbjct: 13  ATQGFSPTHLIGKGSHGLVYKGALQDGKLVAIKKPSPGLQILRDNTKIDNEISMLSSLPE 72

Query: 259 KSCNNLISIVGTSHD 303
               N+IS++GTSHD
Sbjct: 73  NP--NIISLLGTSHD 85


>ref|XP_002264141.1| PREDICTED: serine/threonine-protein kinase-like protein
           At5g23170-like [Vitis vinifera]
          Length = 361

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/75 (66%), Positives = 62/75 (82%)
 Frame = +1

Query: 79  ATQNFSPTNLIGKGSHGCVYKGVLKDGTIVAIKKQSLGLQKLQDNSKLDNEVCILSKLPK 258
           ATQ FSPT+LIGKGSHG VYKG L+DG +VAIKK S GLQ L+DN+K+DNE+ +LS LP+
Sbjct: 15  ATQGFSPTHLIGKGSHGLVYKGALQDGKLVAIKKPSPGLQILRDNTKIDNEISMLSSLPE 74

Query: 259 KSCNNLISIVGTSHD 303
               N+IS++GTSHD
Sbjct: 75  NP--NIISLLGTSHD 87


>gb|ABR18424.1| unknown [Picea sitchensis]
          Length = 511

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/75 (58%), Positives = 57/75 (76%)
 Frame = +1

Query: 79  ATQNFSPTNLIGKGSHGCVYKGVLKDGTIVAIKKQSLGLQKLQDNSKLDNEVCILSKLPK 258
           AT  F+  +L+GKGSHGCVYKGVL DGT+VAIKK S GL+ LQD+S ++NE+ ILSKL  
Sbjct: 37  ATGGFAGESLLGKGSHGCVYKGVLGDGTLVAIKKSSSGLRILQDDSAVENEIEILSKLHS 96

Query: 259 KSCNNLISIVGTSHD 303
                L++++G SHD
Sbjct: 97  P---RLVNLIGFSHD 108


>ref|NP_001238464.1| serine/threonine protein kinase [Glycine max]
           gi|223452294|gb|ACM89475.1| serine/threonine protein
           kinase [Glycine max]
          Length = 337

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
 Frame = +1

Query: 79  ATQNFSPTNLIGKGSHGCVYKGVL-KDGTIVAIKKQSLGLQKLQDNSKLDNEVCILSKLP 255
           AT+NF+P  +IGKGSHG VYKGVL  D   VA+KK S GL+ L DNSKL+NE+ +LS L 
Sbjct: 14  ATENFNPRRIIGKGSHGMVYKGVLFNDRLQVAVKKPSEGLESLHDNSKLENEIRVLSSL- 72

Query: 256 KKSCNNLISIVGTS 297
            +   ++++++GTS
Sbjct: 73  -RESPHVVNLLGTS 85


>ref|XP_002328767.1| predicted protein [Populus trichocarpa] gi|222839065|gb|EEE77416.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
 Frame = +1

Query: 79  ATQNFSPTNLIGKGSHGCVYKGVLKDGTIVAIKKQSLGLQKLQ-DNS-KLDNEVCILSKL 252
           AT +FSP+ L+GKGSHG VYKG L++  +VAIKK S+G   +  DNS KL+NE+C+LS L
Sbjct: 17  ATGSFSPSRLLGKGSHGSVYKGTLEENKLVAIKKSSVGSDHVSIDNSKKLENEICVLSSL 76

Query: 253 PKKSCNNLISIVGTSHD 303
            +     +I+ +GT+ D
Sbjct: 77  GESP--YVINFLGTTRD 91


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