BLASTX nr result

ID: Bupleurum21_contig00030334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030334
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric...   345   1e-92
ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti...   325   1e-86
ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2...   319   6e-85
ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucu...   315   1e-83
ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82

>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 889

 Score =  345 bits (884), Expect = 1e-92
 Identities = 188/344 (54%), Positives = 231/344 (67%), Gaps = 20/344 (5%)
 Frame = -3

Query: 973  LKWPKEASFCLRLLHPEPTSRPKMGELLESEFLNEARDKLKECVKXXXXXXXXXXXXXXX 794
            LKWPKEASFCL LLHPEP+SRPKM ELL+SEFLNE R+ L+E                  
Sbjct: 306  LKWPKEASFCLWLLHPEPSSRPKMCELLQSEFLNEPRENLEEREAAIQLSERIEEQDLLL 365

Query: 793  XXXXLMQQRKEEDASNLRETISFISSDIEEVAKLNTGLQKKGGT---------------- 662
                L+QQRK+E A  L++T+S + SDIEEV K  T L+KKGG+                
Sbjct: 366  DFLLLIQQRKQEAADKLQDTVSLLCSDIEEVLKHRTFLKKKGGSCLERMKDDNLVSNLPP 425

Query: 661  ---IANDDSDCLNLKKRLRPRFQGQYSEKFDDCRDDNQKSEAQTEKQEEIMTKNSKLMKN 491
               + NDDS  L  +KR RP  Q    E+FDD RDD Q S+  TE Q+ ++ K+S+LMKN
Sbjct: 426  FSIVDNDDSSSLGSRKRFRPGIQIFNMEEFDDNRDDAQHSDMVTESQDSLLLKSSRLMKN 485

Query: 490  FKKLESAYFLTRRGAMKPTEKRITRLAPISSDGRGSVILNE-GSVNCLSDKTRLSESRQD 314
            FKKLESAYFLTR   ++ + K   R +PISSDGRGS +++E  S+N L+ K +  ESRQ 
Sbjct: 486  FKKLESAYFLTRCRPIRSSGKPFIRYSPISSDGRGSTVVSERSSINNLAPKEQHVESRQS 545

Query: 313  GCINSFLGGLCKYLTFTKLKVKADLKQGDXXXXXXXXXXXSFDRDGELFATAGVNKKIKV 134
            G I+ FL GLCKYL+F KLK+KADLKQGD           SFDRDGE FATAGVNKKIK+
Sbjct: 546  GWISPFLEGLCKYLSFNKLKIKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIKI 605

Query: 133  FDYNTIVNEDRDIHYPVTEMSNRSKISSICWNGYIKSQIASSNF 2
            F+ + I+NE+RDIHYPV E++ RSK+SS+CWN YIKSQIASSNF
Sbjct: 606  FECDAIINENRDIHYPVVEIATRSKLSSVCWNSYIKSQIASSNF 649


>ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
          Length = 903

 Score =  325 bits (833), Expect = 1e-86
 Identities = 183/345 (53%), Positives = 226/345 (65%), Gaps = 21/345 (6%)
 Frame = -3

Query: 973  LKWPKEASFCLRLLHPEPTSRPKMGELLESEFLNEARDKLKECVKXXXXXXXXXXXXXXX 794
            LKWPKEASFCL LLHPEP+SRPK+ EL +SEFL E RDK++E                  
Sbjct: 324  LKWPKEASFCLWLLHPEPSSRPKISELFQSEFLTEPRDKMEEREAAIELRERIEEQELLL 383

Query: 793  XXXXLMQQRKEEDASNLRETISFISSDIEEVAKLNTGLQKKGGTIA-------------- 656
                LMQQRK+     L++TISF+SSDIEEV K    L+K+GG+                
Sbjct: 384  EFLLLMQQRKQGAVDKLQDTISFLSSDIEEVGKQQATLRKRGGSYQELVKDDQSTSDLSP 443

Query: 655  -----NDDSDCLNLKKRLRPRFQG-QYSEKFDDCRDDNQKSEAQTEKQEEIMTKNSKLMK 494
                 N+DS  +   KR R   QG  + ++ DD  ++ QK     E  E +++K+S+LMK
Sbjct: 444  MDVDENEDSTSVRSSKRFR---QGVHHIKELDDTLNNGQKLGMNAENPEILISKSSRLMK 500

Query: 493  NFKKLESAYFLTRRGAMKPTEKRITRLAPISSDGRGSVILNE-GSVNCLSDKTRLSESRQ 317
            NFKKLESAY LTRR   KP+ K   +++P SS+GRGS+++ E  SVN L+ K + +E  Q
Sbjct: 501  NFKKLESAYLLTRRKPTKPSGKPSNKISPPSSNGRGSIVVTERSSVNNLASKDQYNEHGQ 560

Query: 316  DGCINSFLGGLCKYLTFTKLKVKADLKQGDXXXXXXXXXXXSFDRDGELFATAGVNKKIK 137
             G IN FL GLCKYL+F+KLKVKADLKQGD           SFDRDGELFATAGVNKKIK
Sbjct: 561  SGWINPFLDGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSVSFDRDGELFATAGVNKKIK 620

Query: 136  VFDYNTIVNEDRDIHYPVTEMSNRSKISSICWNGYIKSQIASSNF 2
            VF+ N+I+NEDRDIHYP+ EM+ RSK+SSICWN YIKSQIASSNF
Sbjct: 621  VFECNSILNEDRDIHYPLVEMACRSKLSSICWNSYIKSQIASSNF 665


>ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1|
            predicted protein [Populus trichocarpa]
          Length = 857

 Score =  319 bits (818), Expect = 6e-85
 Identities = 181/345 (52%), Positives = 220/345 (63%), Gaps = 21/345 (6%)
 Frame = -3

Query: 973  LKWPKEASFCLRLLHPEPTSRPKMGELLESEFLNEARDKLKECVKXXXXXXXXXXXXXXX 794
            LKWPKEASFCL LLHPEP+SRPKMGELL+SEFLNE RD L+E                  
Sbjct: 273  LKWPKEASFCLWLLHPEPSSRPKMGELLQSEFLNEPRDYLEEREAAIQLRERIEEQELLL 332

Query: 793  XXXXLMQQRKEEDASNLRETISFISSDIEEVAKLNTGLQKKGGTIAN------------- 653
                 MQQRK++ A+ L+ T+S + SDIEEV K  T L+KKG T                
Sbjct: 333  EFLLPMQQRKQDAANKLQGTVSLLCSDIEEVTKHQTFLKKKGSTCKERGEGDHLASNLPP 392

Query: 652  ------DDSDCLNLKKRLRPRFQGQYSEKFDDCRDDNQKSEAQTEKQEEIMTKNSKLMKN 491
                  DDS  L  +KR     Q   +E  DD  ++ + S+   E QE  + ++S+LMKN
Sbjct: 393  LNIYDIDDSSSLGSRKRFCSGLQILNTEGCDDNLNEGRNSDTFVESQESPLFRSSRLMKN 452

Query: 490  FKKLESAYFLTRRGAMKPTEKR-ITRLAPISSDGRGSVILNE-GSVNCLSDKTRLSESRQ 317
            FKKLESAYFLTR   ++P  K    R +P+S DGRGS+++ E  S+N L+ K R  + RQ
Sbjct: 453  FKKLESAYFLTRSRPVRPPGKPPFVRNSPVSGDGRGSIVVTERSSINSLALKDRFIKGRQ 512

Query: 316  DGCINSFLGGLCKYLTFTKLKVKADLKQGDXXXXXXXXXXXSFDRDGELFATAGVNKKIK 137
             G I+ FL GLCKYL+++KLKVKADLKQGD           SFDRDGE FATAGVNKKIK
Sbjct: 513  SGWISPFLEGLCKYLSYSKLKVKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIK 572

Query: 136  VFDYNTIVNEDRDIHYPVTEMSNRSKISSICWNGYIKSQIASSNF 2
            VF+ +TI+NE RDIHYPV EM +RSK+SSICWN YI SQIASSNF
Sbjct: 573  VFECDTIINEARDIHYPVVEMVSRSKLSSICWNRYITSQIASSNF 617


>ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus]
            gi|449498653|ref|XP_004160596.1| PREDICTED: protein
            SPA1-RELATED 3-like [Cucumis sativus]
          Length = 850

 Score =  315 bits (807), Expect = 1e-83
 Identities = 176/344 (51%), Positives = 222/344 (64%), Gaps = 20/344 (5%)
 Frame = -3

Query: 973  LKWPKEASFCLRLLHPEPTSRPKMGELLESEFLNEARDKLKECVKXXXXXXXXXXXXXXX 794
            LKWPKEASFCL LLHPEPT+RPK+ ELL+S FLNE +D L+E                  
Sbjct: 269  LKWPKEASFCLWLLHPEPTNRPKLSELLQSVFLNEPKDDLEEREAAIKLRKKIEEQELLL 328

Query: 793  XXXXLMQQRKEEDASNLRETISFISSDIEEVAKLNTGLQKKGGT---------------- 662
                LMQQRK+E A  L++TISF+ SDIE+V +  T  +K  G+                
Sbjct: 329  EFLLLMQQRKQEAAHKLQDTISFLCSDIEQVMRHQTNFKKNIGSHTDLVKDNHLPLNLPS 388

Query: 661  ---IANDDSDCLNLKKRLRPRFQGQYSEKFDDCRDDNQKSEAQTEKQEEIMTKNSKLMKN 491
               + N DS  L  +KR RP       E   D  D   K+ ++ + ++ ++ K+S+LMKN
Sbjct: 389  MPPVRNTDSAALGSRKRFRPGILTHDIEACGDNLDHCSKTSSENDNEQGVLFKSSRLMKN 448

Query: 490  FKKLESAYFLTRRGAMKPTEKRITRLAPISSDGRGSVILNE-GSVNCLSDKTRLSESRQD 314
            FKKLE AYFL R    KP+ ++  + + +SSDGRGSV+L E  SVN L+ K   +++RQ 
Sbjct: 449  FKKLELAYFLMRGRVNKPS-RQFVKHSSVSSDGRGSVVLTERSSVNNLASKESCNDNRQG 507

Query: 313  GCINSFLGGLCKYLTFTKLKVKADLKQGDXXXXXXXXXXXSFDRDGELFATAGVNKKIKV 134
            G I+ FL GLCKYL+F+KLKVKADLKQGD           SFDRDGE FATAGVN+KIKV
Sbjct: 508  GWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNRKIKV 567

Query: 133  FDYNTIVNEDRDIHYPVTEMSNRSKISSICWNGYIKSQIASSNF 2
            F Y++IVNEDRDIHYPV EM++RSK+SS+CWN YIKSQIASSNF
Sbjct: 568  FGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIASSNF 611


>ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1|
            predicted protein [Populus trichocarpa]
          Length = 851

 Score =  311 bits (797), Expect = 2e-82
 Identities = 177/345 (51%), Positives = 218/345 (63%), Gaps = 21/345 (6%)
 Frame = -3

Query: 973  LKWPKEASFCLRLLHPEPTSRPKMGELLESEFLNEARDKLKECVKXXXXXXXXXXXXXXX 794
            LKW KEASFCL LLHPEP+SRPK+GELL+S+FLNE  + L+E                  
Sbjct: 275  LKWSKEASFCLWLLHPEPSSRPKIGELLQSDFLNEPINNLEELEAATQLRERIEEQELLL 334

Query: 793  XXXXLMQQRKEEDASNLRETISFISSDIEEVAKLNTGLQKKGGTIAN------------- 653
                L+QQRK++ A  L++TIS + SDIEEV K    L+KKG T                
Sbjct: 335  EFLLLIQQRKQDAADKLQDTISLLCSDIEEVTKHQVFLKKKGDTCKERGEGDHLTSNIPA 394

Query: 652  ------DDSDCLNLKKRLRPRFQGQYSEKFDDCRDDNQKSEAQTEKQEEIMTKNSKLMKN 491
                  DDS  L  +KR  P  +    EK DD  D++Q S+   E QE  + ++S+LMKN
Sbjct: 395  LNVVDIDDSSSLGSRKRFCPGLEIHNVEKCDDNLDESQNSDTFVESQESPLFRSSRLMKN 454

Query: 490  FKKLESAYFLTRRGAMKPTEK-RITRLAPISSDGRGSVILNE-GSVNCLSDKTRLSESRQ 317
            FKKLESAYFLTR   ++P  K    R  P+ SDGR S++  E  S+N ++ K + +E R+
Sbjct: 455  FKKLESAYFLTRCRPVRPPGKPSFARNLPVISDGRISIVATERSSINSIAPKQQFTEGRR 514

Query: 316  DGCINSFLGGLCKYLTFTKLKVKADLKQGDXXXXXXXXXXXSFDRDGELFATAGVNKKIK 137
             G I+ FL GLCKYL+F+KLKVKADLKQGD           SFDRDGE FATAGVNKKIK
Sbjct: 515  SGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSISFDRDGEFFATAGVNKKIK 574

Query: 136  VFDYNTIVNEDRDIHYPVTEMSNRSKISSICWNGYIKSQIASSNF 2
            VF+ +TI+NE RDIHYPV EM  RSK+SSICWN YIKSQ+ASSNF
Sbjct: 575  VFECDTIINEARDIHYPVVEMVCRSKLSSICWNSYIKSQLASSNF 619


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