BLASTX nr result

ID: Bupleurum21_contig00030328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030328
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306963.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_003570063.1| PREDICTED: uncharacterized mscS family prote...    83   3e-14
dbj|BAJ90665.1| predicted protein [Hordeum vulgare subsp. vulgare]     83   3e-14
dbj|BAK01970.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   3e-14
ref|NP_001159287.1| uncharacterized protein LOC100304377 [Zea ma...    80   1e-13

>ref|XP_002306963.1| predicted protein [Populus trichocarpa] gi|222856412|gb|EEE93959.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/57 (71%), Positives = 51/57 (89%)
 Frame = +3

Query: 6   QDMGERWIRRALLVGEMIKVCRELDIEYRMLPVDVNVRNMPPLTSTRVPSNWLSCAH 176
           Q+M ERW+RR LL+GEMIKV +ELDIEYR+LP+DVN+RNMPPL S R+PSNW +CA+
Sbjct: 244 QEMEERWVRRNLLLGEMIKVFKELDIEYRVLPLDVNIRNMPPLVSNRLPSNWTTCAN 300


>ref|XP_003570063.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
            [Brachypodium distachyon]
          Length = 959

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = +3

Query: 3    FQDMGERWIRRALLVGEMIKVCRELDIEYRMLPVDVNVRNMPPLTSTRVPSNW 161
            FQDMG R++RR L++ EMIKV ++LDIEYRMLP+DVNVRN PPL STR+P+ W
Sbjct: 904  FQDMGMRFVRRELVLQEMIKVLKDLDIEYRMLPLDVNVRNAPPLQSTRMPTTW 956


>dbj|BAJ90665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 307

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = +3

Query: 3   FQDMGERWIRRALLVGEMIKVCRELDIEYRMLPVDVNVRNMPPLTSTRVPSNW 161
           FQDMG R++RR L++ EMI+V R+LDIEYRMLP+DVNVRN PPL STR+P+ W
Sbjct: 252 FQDMGMRFVRRELVLQEMIRVLRDLDIEYRMLPLDVNVRNTPPLQSTRMPTTW 304


>dbj|BAK01970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 938

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/53 (67%), Positives = 47/53 (88%)
 Frame = +3

Query: 3    FQDMGERWIRRALLVGEMIKVCRELDIEYRMLPVDVNVRNMPPLTSTRVPSNW 161
            FQDMG R++RR L++ EMI+V ++LDIEYRMLP+DVNVRN+PPL STR+P+ W
Sbjct: 883  FQDMGMRFVRRELVLQEMIRVLKDLDIEYRMLPLDVNVRNVPPLQSTRMPTTW 935


>ref|NP_001159287.1| uncharacterized protein LOC100304377 [Zea mays]
            gi|223943213|gb|ACN25690.1| unknown [Zea mays]
            gi|413938170|gb|AFW72721.1| hypothetical protein
            ZEAMMB73_243815 [Zea mays]
          Length = 966

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/53 (66%), Positives = 46/53 (86%)
 Frame = +3

Query: 3    FQDMGERWIRRALLVGEMIKVCRELDIEYRMLPVDVNVRNMPPLTSTRVPSNW 161
            FQDMG R++RR L++ EMIKV ++L+IEYRMLP+DVNVRN PP+ STR+P+ W
Sbjct: 911  FQDMGMRFVRRELVLQEMIKVLKDLEIEYRMLPLDVNVRNAPPIQSTRMPTTW 963


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