BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030317
         (1993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]         197   9e-51
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   202   2e-49
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   189   6e-49
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   186   3e-44
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   181   8e-43

>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score =  197 bits (501), Expect(2) = 9e-51
 Identities = 130/425 (30%), Positives = 196/425 (46%), Gaps = 16/425 (3%)
 Frame = +2

Query: 392  GSNNSKGIRWLSLDKMCMAKNKGGLGFRDLYGFNLALLGKQCWNMIRNPEDLVSRVLKAR 571
            G  N   + W S +K+C +K  GGLGFR L  FN A+L KQ W ++  P  L + +L+A+
Sbjct: 69   GDRNGSKMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATILRAK 128

Query: 572  YFPDCHILQARRTACSSSTWSSIWEAKEEIKKGLRWVLGDGKTINISTDR*LRAKESFCV 751
            Y+P    L+   +  SS TW SI +  + ++KG+ W +G G T+   +D  +   ++   
Sbjct: 129  YYPRKSPLEISSSPYSSYTWRSILKGSQLLQKGIEWRIGQGNTVRTWSDPWIPGSDTGLP 188

Query: 752  DQATATVATNSKVCEFFAEDNKRWDESKVRSNFGRVDANAILSTRIPQVCAKDRIA*DHS 931
               +      + V +F    N  W+E+ +R  F   D   IL  R+      D +     
Sbjct: 189  KYHSPGSDLYTHVSDFI--QNGGWNENLLRLCFEEEDVTRILQIRLSLRRPLDMVRWKFI 246

Query: 932  SNGQYTVKTGYQ-----QWHINHVGTGGLQQSKGLSKMWTLAVPHKIKILLWRLCRNNIS 1096
             +G+YTV++GY       WH N+         +     W L  P +IK LLWRL  NN+S
Sbjct: 247  KDGEYTVRSGYYIDFNCWWHENYATPLTHAGEERWKTCWGLRCPPRIKTLLWRLIDNNLS 306

Query: 1097 LRNVLRGKGVQVPISCTMCVGEIEHLLHLFSDCPFALQCWQEVGLEYNMAEVLEKLETEP 1276
            +R  L  +G+QV   C  C G  E   HLF  CP+ L  W+EV ++  +      L    
Sbjct: 307  VRTNLTRRGIQVDEVCPCCAGPSETAAHLFFCCPYTLDIWKEVNVQIQVESSENILLAI- 365

Query: 1277 *DNLIKI---------AAVLWGVWFARNKRIFENKNMNPSATMEWSMKQITGWRIVNKRS 1429
             D+L+ I         AA LW +W  RN  +F  +        +   K    W       
Sbjct: 366  -DSLLNIRDPVEQSRRAATLWIIWRVRNSIVF--RTGEEIVICKELEKGFRFW------- 415

Query: 1430 QMAAKQRSNPVQQS--QSQRWNPPTMGTYKINVDASVKEGQNFFSVEMVLRNDEGQFLAG 1603
            Q       NP  +   ++ +WN PT G YKINVDA ++  +    V +V+R+D G F+  
Sbjct: 416  QDFMDTEGNPTVRGAPRTSKWNAPTAGFYKINVDAGLR-AERGGQVGIVVRDDTGAFVMA 474

Query: 1604 KTMCF 1618
             T  F
Sbjct: 475  TTRSF 479



 Score = 31.6 bits (70), Expect(2) = 9e-51
 Identities = 19/80 (23%), Positives = 36/80 (45%)
 Frame = +1

Query: 1627 TMCFVGRVQVLEAEMIGITEALSWLYGLQIPKVVVESDSVLCVNAINSDYVSLLEIGDLV 1806
            T  F   V     E   +   L +   L + +V +ESD +  V  ++  Y    ++ +++
Sbjct: 476  TRSFPNLVHPTLLEGQAVYTGLEFANALGLERVELESDCLPVVMQLSKGYTDRSDLSNII 535

Query: 1807 QQCKKLICNRGGVSVSCVRK 1866
              CK L+ N   V ++ VR+
Sbjct: 536  DDCKMLLSNFQQVRIAHVRR 555


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  202 bits (515), Expect = 2e-49
 Identities = 125/410 (30%), Positives = 205/410 (50%), Gaps = 10/410 (2%)
 Frame = +2

Query: 392  GSNNSKGIRWLSLDKMCMAKNKGGLGFRDLYGFNLALLGKQCWNMIRNPEDLVSRVLKAR 571
            G  + + + WLS +KMC  K  GG+GF+DL  FN ALLGKQ W ++ N E L+SRV+ A+
Sbjct: 836  GKGDERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAK 895

Query: 572  YFPDCHILQARRTACSSSTWSSIWEAKEEIKKGLRWVLGDGKTINISTDR*LRAKESFCV 751
            Y+P   +  AR     S +W SIW AK  + +GL W +GDG  I+I +   +  +E   +
Sbjct: 896  YYPHGDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFI 955

Query: 752  DQATATVATNSKVCEFFAEDNKRWDESKVRSNFGRVDANAILSTRIPQVCAKDRIA*DHS 931
               +A V     V +    + K W+   +  +F   D   IL+  +   C +D +   +S
Sbjct: 956  --KSARVEGLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYS 1013

Query: 932  SNGQYTVKTGYQQWHINHVGTGGLQQS--KGLSKMWTLAVPHKIKILLWRLCRNNISLRN 1105
             +G Y+VKT Y       +G GG      +  + +W+L V  K++  LWR C +++ +R 
Sbjct: 1014 KDGTYSVKTAYM------LGKGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRK 1067

Query: 1106 VLRGKGVQVPISCTMCVGEIEHLLHLFSDCPFALQCWQEVGL--------EYNMAEVLEK 1261
            VL+ + +     C  C  E E   HLF  CP +L+ W+E+G         +  M + L +
Sbjct: 1068 VLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVR 1127

Query: 1262 LETEP*DNLIKIAAVLWGVWFARNKRIFENKNMNPSATMEWSMKQITGWRIVNKRSQMAA 1441
                    + K   +LW VW  RN+R+FE+ +   +   +  M+Q+  +   N   ++  
Sbjct: 1128 WSQMDAKVVQKGCYILWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDFN--NYAVKIYG 1185

Query: 1442 KQRSNPVQQSQSQRWNPPTMGTYKINVDASVKEGQNFFSVEMVLRNDEGQ 1591
              RS+        RW  P +G  K+N DAS+ E + +  + ++ R+ EG+
Sbjct: 1186 GMRSSAA--LSPSRWYAPPVGAIKLNTDASLAE-EGWVGLGVIARDSEGK 1232


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  189 bits (479), Expect(2) = 6e-49
 Identities = 124/410 (30%), Positives = 186/410 (45%), Gaps = 11/410 (2%)
 Frame = +2

Query: 407  KGIRWLSLDKMCMAKNKGGLGFRDLYGFNLALLGKQCWNMIRNPEDLVSRVLKARYFPDC 586
            + IRW+S  KMC  K  GGLGFR L  FNLALL KQ W  +RNP+ LV+R+ +ARYF + 
Sbjct: 302  RSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNS 361

Query: 587  HILQARRTACSSSTWSSIWEAKEEIKKGLRWVLGDGKTINISTDR*LRAKESFCVDQATA 766
              L A   +  S  W SI  A+  +K+G  W +  G  + +  D  L    +  +     
Sbjct: 362  SFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPV 421

Query: 767  TVATNSKVCEFFAEDNKRWDESKVRSNFGRVDANAILSTRIPQVCAKDRIA*DHSSNGQY 946
                  KV E   E    W E  +R  F   DA+ ILS  +P    +D+I+    + G+Y
Sbjct: 422  AGFDGIKVDELITEG--LWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEY 479

Query: 947  TVKTGYQQWHINHVGT----GGLQQSKGLSKMWTLAVPHKIKILLWRLCRNNISLRNVLR 1114
            T ++GY         T      +  +   +++W +  P KI    WR  RN +  R  L 
Sbjct: 480  TARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALT 539

Query: 1115 GKGVQVPISCTMCVGEIEHLLHLFSDCPFALQCWQEVG---LEYNMAEVLEKLET--EP* 1279
             + V  P+ C +C  E+E  LH   +C  A   W E G   L+ N    ++ L T     
Sbjct: 540  IRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYC 599

Query: 1280 DNLI--KIAAVLWGVWFARNKRIFENKNMNPSATMEWSMKQITGWRIVNKRSQMAAKQRS 1453
            D ++  K  AV WG+W+ RN  ++  +  +    +      +  W   N+    A     
Sbjct: 600  DFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLATAV---- 655

Query: 1454 NPVQQSQSQRWNPPTMGTYKINVDASVKEGQNFFSVEMVLRNDEGQFLAG 1603
                 S S +W  P  G  KINVD +V   +   ++  V R+ +G+F+ G
Sbjct: 656  --TVPSYSSKWQKPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGG 701



 Score = 33.9 bits (76), Expect(2) = 6e-49
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 1666 EMIGITEALSWLYGLQIPKVVVESDSVLCVNAINSDYVSLLEIGDLVQQCKKLICNRGGV 1845
            E +G+ E LSW++     ++VVE+D +  V AI          G ++  C  ++ +   V
Sbjct: 716  EALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDV 775

Query: 1846 SVSCVRK 1866
             V   R+
Sbjct: 776  QVVYARR 782


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  186 bits (471), Expect = 3e-44
 Identities = 125/414 (30%), Positives = 203/414 (49%), Gaps = 13/414 (3%)
 Frame = +2

Query: 395  SNNSKGIRWLSLDKMCMAKNKGGLGFRDLYGFNLALLGKQCWNMIRNPEDLVSRVLKARY 574
            S+  + I W + D MC  K  GG+GF+DL  FN ALLG+Q W + R P+ L+ RV+KA+Y
Sbjct: 834  SDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKY 893

Query: 575  FPDCHILQARRTACSSSTWSSIWEAKEEIKKGLRWVLGDGKTINISTDR-*LRAKESFCV 751
            FP+C  L A     SS +WSSIW +K  +K+G+ W +G+G  IN+ +D   L     F  
Sbjct: 894  FPNCDFLNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWVLDEGGRFLT 953

Query: 752  DQATATVATNSKVCEFFAEDNKRWDESKVRSNFGRVDANAILSTRIPQVCAKDRIA*DHS 931
                A++   S++ +F   D   W  S + S     D   IL++ +      D +    +
Sbjct: 954  STPHASIRWVSELIDF---DRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAFT 1010

Query: 932  SNGQYTVKTGYQQWHINHVGTGGLQQS--KGLSKMWTLAVPHKIKILLWRLCRNNISLRN 1105
             +  Y+VKT Y       +G GG   +  +    +W+L V  K++  LWRLC  ++ +R+
Sbjct: 1011 KDATYSVKTAYM------IGKGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLPVRS 1064

Query: 1106 VLRGKGVQVPISCTMCVGEIEHLLHLFSDCPFALQCWQEVGLE--------YNMAEVLEK 1261
            +L+ + +     C    GEIE   H   DCP     W + G +         +M ++L  
Sbjct: 1065 LLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASMSMCDLLVS 1124

Query: 1262 LETEP*DNLIKIAAVLWGVWFARNKRIFENKNMNPSATMEWSMKQITGWRIVNKRSQMAA 1441
              +      IK A + W +W  RN +IF NK   PS+ +   M++++  R+V +    A 
Sbjct: 1125 WRSLDGKLRIKGAYLAWCIWGERNAKIFNNKT-TPSSVL---MQRVS--RLVEENGSHAR 1178

Query: 1442 K--QRSNPVQQSQSQRWNPPTMGTYKINVDASVKEGQNFFSVEMVLRNDEGQFL 1597
            +  Q   P +    ++W  P   + K+NVDAS+     +  + ++ R  +G  L
Sbjct: 1179 RIYQPLVPRRTGSPRQWIAPPADSIKLNVDASLAV-DGWVGLSVIARRSDGGVL 1231


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  181 bits (458), Expect = 8e-43
 Identities = 114/420 (27%), Positives = 194/420 (46%), Gaps = 17/420 (4%)
 Frame = +2

Query: 395  SNNSKGIRWLSLDKMCMAKNKGGLGFRDLYGFNLALLGKQCWNMIRNPEDLVSRVLKARY 574
            S+ ++ + W S D +C  K+ GGLGFRDL+ FN +LL KQ W +    + L+ R+L+ARY
Sbjct: 833  SDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARY 892

Query: 575  FPDCHILQARRTACSSSTWSSIWEAKEEIKKGLRWVLGDGKTINISTDR*LRAKESFCVD 754
            F    +L+ARR    S TW SIW +K  + +GL+W +G G+ I +  D  +  + +  V 
Sbjct: 893  FKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDAWILGEGAHMVP 952

Query: 755  QATATVATNSKVCEFFAEDNKRWDESKVRSNFGRVDANAILSTRIPQVCAKDRIA*DHSS 934
               A    + KVC+        W+   V+  F   +   +LS  + +    D      S 
Sbjct: 953  TPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSR 1012

Query: 935  NGQYTVKTGY--------QQWHINHVGTGGLQQSKGLSKMWTLAVPHKIKILLWRLCRNN 1090
            NG ++V++ Y        + W + H    G ++++   ++W L  P K+   LWR C+ +
Sbjct: 1013 NGIFSVRSCYWLGRLGPVRTWQLQH----GERETELWRRVWQLQGPPKLSHFLWRACKGS 1068

Query: 1091 ISLRNVLRGKGVQVPISCTMCVGEIEHLLHLFSDCPFALQCWQEVG-----LEYNMAEVL 1255
            ++++  L  + + V  +C++C    E + H   DC FA   WQ  G     +   ++   
Sbjct: 1069 LAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGFASLMMNAPLSSFS 1128

Query: 1256 EKLE----TEP*DNLIKIAAVLWGVWFARNKRIFENKNMNPSATMEWSMKQITGWRIVNK 1423
            E+LE        +    + + +W  WF RNK IFEN+  +     +   K +  +     
Sbjct: 1129 ERLEWLAKHATKEEFRTMCSFMWAGWFCRNKLIFENELSDAPLVAKRFSKLVADY----- 1183

Query: 1424 RSQMAAKQRSNPVQQSQSQRWNPPTMGTYKINVDASVKEGQNFFSVEMVLRNDEGQFLAG 1603
                 +  R +      S  W+PP  G +K+N DA +          ++  ND G  + G
Sbjct: 1184 CEYAGSVFRGSGGGCGSSALWSPPPTGMFKVNFDAHLSPNGEVGLGVVIRANDGGIKMLG 1243