BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030312
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   108   4e-22
ref|XP_002516609.1| pentatricopeptide repeat-containing protein,...    86   2e-15
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...    70   2e-10
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar...    67   2e-09

>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/135 (40%), Positives = 85/135 (62%)
 Frame = +1

Query: 7   ISECLGFFKDIRWEGNKPDLISYNTILSAAARKEKGTMIIKMLLDQMQYDGVKLDITRAT 186
           I E L  F    W  N PD++S+NTILSAA ++   +MI ++L  +M+Y+GVKL++  +T
Sbjct: 341 IDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLY-RMEYEGVKLNVVSST 399

Query: 187 SLLLYYYRARKYSECLKLFEFMMNDGRCSTILTSDTLIERLCKIRALNMAYWIFNNLKRF 366
            L+ Y+    K SECL+L E M+ +G   T++T + L+++LCK   L  A+ IF   +  
Sbjct: 400 CLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNT 459

Query: 367 GYSLDSTTYITLIHA 411
           GY  ++T+Y  LIHA
Sbjct: 460 GYFPNTTSYNILIHA 474


>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/135 (40%), Positives = 85/135 (62%)
 Frame = +1

Query: 7   ISECLGFFKDIRWEGNKPDLISYNTILSAAARKEKGTMIIKMLLDQMQYDGVKLDITRAT 186
           I E L  F    W  N PD++S+NTILSAA ++   +MI ++L  +M+Y+GVKL++  +T
Sbjct: 449 IDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLY-RMEYEGVKLNVVSST 507

Query: 187 SLLLYYYRARKYSECLKLFEFMMNDGRCSTILTSDTLIERLCKIRALNMAYWIFNNLKRF 366
            L+ Y+    K SECL+L E M+ +G   T++T + L+++LCK   L  A+ IF   +  
Sbjct: 508 CLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNT 567

Query: 367 GYSLDSTTYITLIHA 411
           GY  ++T+Y  LIHA
Sbjct: 568 GYFPNTTSYNILIHA 582


>ref|XP_002516609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544429|gb|EEF45950.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/120 (36%), Positives = 72/120 (60%)
 Frame = +1

Query: 10  SECLGFFKDIRWEGNKPDLISYNTILSAAARKEKGTMIIKMLLDQMQYDGVKLDITRATS 189
           ++ L      +W  N PD++S+NTIL  A ++    MI K +L +M+Y+G+K DI  +T 
Sbjct: 341 ADALELLDHFKWGTNGPDVVSFNTILFMACKQGNSVMIQK-ILHRMEYEGIKPDIVSSTF 399

Query: 190 LLLYYYRARKYSECLKLFEFMMNDGRCSTILTSDTLIERLCKIRALNMAYWIFNNLKRFG 369
           L+ Y  R  K+SECLKL + MM++G   T +T + ++ +LCK   + +A  IF + +  G
Sbjct: 400 LIQYLCRVGKFSECLKLLDAMMHNGTGPTKITINMVLNKLCKNGLVGIALQIFKHARHTG 459


>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/133 (30%), Positives = 73/133 (54%)
 Frame = +1

Query: 7   ISECLGFFKDIRWEGNKPDLISYNTILSAAARKEKGTMIIKMLLDQMQYDGVKLDITRAT 186
           + + L  +++++  G++PD  +Y  I+   ++  +     K +  +MQY+G   D T   
Sbjct: 316 VKDALVVYEELKISGHEPDAFTYRIIIEGCSKSYRMNDATK-IFSEMQYNGFVPDTTVYN 374

Query: 187 SLLLYYYRARKYSECLKLFEFMMNDGRCSTILTSDTLIERLCKIRALNMAYWIFNNLKRF 366
           SLL   ++ARK +E  +LFE M+ DG  ++  T + LI+ LCK       Y +F +LK+ 
Sbjct: 375 SLLDGMFKARKVTEACQLFEKMVQDGVRASSWTYNILIDGLCKNGRSAAGYSLFCDLKKK 434

Query: 367 GYSLDSTTYITLI 405
           G  +D+ TY  ++
Sbjct: 435 GKFVDAITYSIIV 447


>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
           [Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251570|gb|AEC06664.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 463

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
 Frame = +1

Query: 10  SECLGFFKDIRWEGNKPDLISYNTI---LSAAARKEKGTMIIKMLLDQMQYDGVKLDITR 180
           SE +G +K ++ EG +PD I+YNT+   LS A R E+  M +K ++D     G + D   
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA----GYEPDTAT 337

Query: 181 ATSLLLYYYRARKYSECLKLFEFMMNDGRCSTILTSDTLIERLCKIRALNMAYWIFNNLK 360
            TSL+    R  +    L L E M   G      T +TL+  LCK R ++    ++  +K
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397

Query: 361 RFGYSLDSTTYITLIHA 411
             G  L+S  Y TL+ +
Sbjct: 398 SSGVKLESNGYATLVRS 414