BLASTX nr result

ID: Bupleurum21_contig00030306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030306
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   259   2e-67
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              259   2e-67
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   254   6e-66
ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago tr...   239   2e-61
ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   236   1e-60

>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  259 bits (662), Expect = 2e-67
 Identities = 133/185 (71%), Positives = 153/185 (82%)
 Frame = +2

Query: 2   KYIKSLNDKQCEAACSDISIPLVIVAGPGSGKISTMVGRVLMLLNEGISPSNILAMTFTT 181
           KY++SLND Q EAACSDISIPL+IVAGPGSGK STMVGR+LMLLNEGISPSNILAMTFTT
Sbjct: 209 KYLQSLNDTQREAACSDISIPLMIVAGPGSGKTSTMVGRILMLLNEGISPSNILAMTFTT 268

Query: 182 AAASEMRDRIGPMAGRKVAKELMVSTFHSFALQLCRAQAEKLERTPEFLTYGQGQQRRAI 361
           AAASEM  RI  +AG++ AKE+ VSTFHSFALQLCR+ AEKL RT EFL YG GQQRRAI
Sbjct: 269 AAASEMSGRIAAVAGKETAKEVTVSTFHSFALQLCRSHAEKLGRTSEFLIYGHGQQRRAI 328

Query: 362 IEAIRLCENDKNSKDSELCKLGEESNGINSAHFFKDKAQKWLKFVTQAKASGKNSQYFQK 541
           IEA+R+ E + + K++   K+GEESN INS   FKDK++KW KFVTQAKASGK  +  + 
Sbjct: 329 IEAVRIFETENSKKNNNGSKVGEESNDINSPQNFKDKSKKWQKFVTQAKASGKTPEECRN 388

Query: 542 SGDEI 556
            GDEI
Sbjct: 389 MGDEI 393


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  259 bits (662), Expect = 2e-67
 Identities = 133/185 (71%), Positives = 153/185 (82%)
 Frame = +2

Query: 2   KYIKSLNDKQCEAACSDISIPLVIVAGPGSGKISTMVGRVLMLLNEGISPSNILAMTFTT 181
           KY++SLND Q EAACSDISIPL+IVAGPGSGK STMVGR+LMLLNEGISPSNILAMTFTT
Sbjct: 7   KYLQSLNDTQREAACSDISIPLMIVAGPGSGKTSTMVGRILMLLNEGISPSNILAMTFTT 66

Query: 182 AAASEMRDRIGPMAGRKVAKELMVSTFHSFALQLCRAQAEKLERTPEFLTYGQGQQRRAI 361
           AAASEM  RI  +AG++ AKE+ VSTFHSFALQLCR+ AEKL RT EFL YG GQQRRAI
Sbjct: 67  AAASEMSGRIAAVAGKETAKEVTVSTFHSFALQLCRSHAEKLGRTSEFLIYGHGQQRRAI 126

Query: 362 IEAIRLCENDKNSKDSELCKLGEESNGINSAHFFKDKAQKWLKFVTQAKASGKNSQYFQK 541
           IEA+R+ E + + K++   K+GEESN INS   FKDK++KW KFVTQAKASGK  +  + 
Sbjct: 127 IEAVRIFETENSKKNNNGSKVGEESNDINSPQNFKDKSKKWQKFVTQAKASGKTPEECRN 186

Query: 542 SGDEI 556
            GDEI
Sbjct: 187 MGDEI 191


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  254 bits (649), Expect = 6e-66
 Identities = 131/185 (70%), Positives = 150/185 (81%)
 Frame = +2

Query: 2   KYIKSLNDKQCEAACSDISIPLVIVAGPGSGKISTMVGRVLMLLNEGISPSNILAMTFTT 181
           KY+KSLND+Q EAAC+DIS PL+IVAGPGSGK STMVGRVLMLLNEGISPSNILAMTFTT
Sbjct: 218 KYLKSLNDRQREAACTDISTPLMIVAGPGSGKTSTMVGRVLMLLNEGISPSNILAMTFTT 277

Query: 182 AAASEMRDRIGPMAGRKVAKELMVSTFHSFALQLCRAQAEKLERTPEFLTYGQGQQRRAI 361
           AAASEMR+RIG +AG+  AKEL +STFHSF+LQLCR+  EKL RT EFL YGQGQQR AI
Sbjct: 278 AAASEMRERIGAIAGKATAKELTISTFHSFSLQLCRSHGEKLGRTSEFLIYGQGQQRNAI 337

Query: 362 IEAIRLCENDKNSKDSELCKLGEESNGINSAHFFKDKAQKWLKFVTQAKASGKNSQYFQK 541
           IEAIRL E  K+        +GE SN +N+   FKDKA+KW KFV QAKASG+ S  ++K
Sbjct: 338 IEAIRLLEIGKSENKDGALLIGELSNSLNNPKQFKDKAKKWQKFVAQAKASGRTSAEYRK 397

Query: 542 SGDEI 556
            G+EI
Sbjct: 398 MGNEI 402


>ref|XP_003590707.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479755|gb|AES60958.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 906

 Score =  239 bits (611), Expect = 2e-61
 Identities = 122/185 (65%), Positives = 147/185 (79%)
 Frame = +2

Query: 2   KYIKSLNDKQCEAACSDISIPLVIVAGPGSGKISTMVGRVLMLLNEGISPSNILAMTFTT 181
           KY+KSLN++Q EAAC+D+S PL+IVAGPGSGK STMVGRVLMLLNEGISP NILAMTFT 
Sbjct: 353 KYLKSLNERQREAACTDVSTPLMIVAGPGSGKTSTMVGRVLMLLNEGISPLNILAMTFTA 412

Query: 182 AAASEMRDRIGPMAGRKVAKELMVSTFHSFALQLCRAQAEKLERTPEFLTYGQGQQRRAI 361
           AAA+EMR RIG +AG++ AKEL +STFHSF LQLCR+ AEKL RT EFL YGQ QQR AI
Sbjct: 413 AAAAEMRKRIGAIAGKQTAKELTISTFHSFCLQLCRSHAEKLGRTSEFLIYGQWQQRNAI 472

Query: 362 IEAIRLCENDKNSKDSELCKLGEESNGINSAHFFKDKAQKWLKFVTQAKASGKNSQYFQK 541
           IEA RL EN+ +   +    +GE S+G+ +   FKDKA+KW  FVTQAKASG+ S  ++ 
Sbjct: 473 IEATRLLENETSKHKNGELLIGEASDGLKTPKQFKDKAKKWQNFVTQAKASGRTSAEYRD 532

Query: 542 SGDEI 556
            G++I
Sbjct: 533 MGNQI 537


>ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Brachypodium
           distachyon]
          Length = 1192

 Score =  236 bits (603), Expect = 1e-60
 Identities = 121/183 (66%), Positives = 147/183 (80%)
 Frame = +2

Query: 2   KYIKSLNDKQCEAACSDISIPLVIVAGPGSGKISTMVGRVLMLLNEGISPSNILAMTFTT 181
           +Y+ SLND+Q EAACSD+++PL+I+AGPGSGK STMVGRVL LL EGI PSNILAMTFTT
Sbjct: 309 EYLHSLNDRQREAACSDVTVPLMILAGPGSGKTSTMVGRVLTLLKEGIPPSNILAMTFTT 368

Query: 182 AAASEMRDRIGPMAGRKVAKELMVSTFHSFALQLCRAQAEKLERTPEFLTYGQGQQRRAI 361
           AAA+EMRDRIG + G+ VAKE+++STFHSF LQLCR  AEKL RT EF+ YG GQQRRA+
Sbjct: 369 AAAAEMRDRIGAVVGKAVAKEIVISTFHSFCLQLCRNHAEKLGRTSEFIIYGHGQQRRAV 428

Query: 362 IEAIRLCENDKNSKDSELCKLGEESNGINSAHFFKDKAQKWLKFVTQAKASGKNSQYFQK 541
           IEA RL E+DK+    +  K   E  GI ++  FKDKA+KWLKFVTQAK+SG+  + F+K
Sbjct: 429 IEAERLLEHDKSDDLGDAVKQNHE--GIKNS--FKDKAKKWLKFVTQAKSSGRTPEEFEK 484

Query: 542 SGD 550
            GD
Sbjct: 485 KGD 487


Top