BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030302
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   232   4e-91
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   223   1e-88
emb|CBI37538.3| unnamed protein product [Vitis vinifera]              223   3e-86
ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...   222   3e-86
gb|ACY01922.1| hypothetical protein [Beta vulgaris]                   206   3e-84

>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223530792|gb|EEF32657.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  232 bits (592), Expect(2) = 4e-91
 Identities = 103/142 (72%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
 Frame = -3

Query: 423 DFTVTAFDANHCPGAIMLLFEGTFGSILHTGDCRLDQECLQSLPKKYLGTRTKEPKCRID 244
           +F+VTAFDANHCPGA+M LFEG+FG+ILHTGDCRL  EC+Q LPKKY+    KEP+C++D
Sbjct: 86  NFSVTAFDANHCPGAVMFLFEGSFGNILHTGDCRLSPECIQCLPKKYISKNGKEPRCQLD 145

Query: 243 YIFLDCTFGRF-SKMPSKHSAIRQVINCIWKHPGAPIVYLTCDMLGQEEILVNVSQTFGS 67
           Y+FLDCTFGRF  K+PSKHSA +QVINCIWKHP A IVYLTCD+LGQEE+L NVS+TFGS
Sbjct: 146 YVFLDCTFGRFHQKLPSKHSASQQVINCIWKHPAAAIVYLTCDLLGQEELLANVSRTFGS 205

Query: 66  KIFVDKEGNPECYQYLKLTVPE 1
           KI+V+K  NPEC+  L LTVP+
Sbjct: 206 KIYVEKAANPECFHALTLTVPQ 227



 Score =  129 bits (323), Expect(2) = 4e-91
 Identities = 60/83 (72%), Positives = 68/83 (81%)
 Frame = -1

Query: 671 MPIEMPRGVPFSVDTWTPCSMRKRHRFLTHAHRDHSQGISSFHSFPIYSTSLTKLLTLRY 492
           MPIEMPRG+PFSVDTW+P S RKRH FLTHAH+DH  GI +  S+PIY+T LTK L L Y
Sbjct: 1   MPIEMPRGLPFSVDTWSPTSKRKRHHFLTHAHKDHCSGILAHSSYPIYATHLTKSLLLLY 60

Query: 491 FPQLNESLFVDIEVGQSIVIHDP 423
           FPQL +SLFV IEVGQS+VI DP
Sbjct: 61  FPQLEDSLFVGIEVGQSLVIDDP 83


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  223 bits (567), Expect(2) = 1e-88
 Identities = 105/141 (74%), Positives = 118/141 (83%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 FTVTAFDANHCPGAIMLLFEGTFGSILHTGDCRLDQECLQSLPKKYLGTRTKEPKCRIDY 241
           F VTAFDANHCPGA+M LFEG FG+ILHTGDCRL  ECLQ+LP+KY+  + KEPKC+ DY
Sbjct: 87  FGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRLIPECLQNLPQKYVTKKGKEPKCQFDY 146

Query: 240 IFLDCTFGRFS-KMPSKHSAIRQVINCIWKHPGAPIVYLTCDMLGQEEILVNVSQTFGSK 64
           +FLDCTFGR S  +PSKH AI+QVINCIWKHP APIVYL  DMLGQEEIL+NVS+ FGSK
Sbjct: 147 VFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSK 206

Query: 63  IFVDKEGNPECYQYLKLTVPE 1
           IFVDK  NPEC+Q L   VPE
Sbjct: 207 IFVDKANNPECFQALTHMVPE 227



 Score =  130 bits (327), Expect(2) = 1e-88
 Identities = 59/83 (71%), Positives = 71/83 (85%)
 Frame = -1

Query: 671 MPIEMPRGVPFSVDTWTPCSMRKRHRFLTHAHRDHSQGISSFHSFPIYSTSLTKLLTLRY 492
           MPIEMPRG+PFSVDTWTP S +KRH FLTHAH+DHS GIS+  ++PIYST LTK L L+ 
Sbjct: 1   MPIEMPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQ 60

Query: 491 FPQLNESLFVDIEVGQSIVIHDP 423
           +PQL++SLFV IEVGQS+V+ DP
Sbjct: 61  YPQLDDSLFVGIEVGQSMVVDDP 83


>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  223 bits (567), Expect(2) = 3e-86
 Identities = 105/141 (74%), Positives = 118/141 (83%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 FTVTAFDANHCPGAIMLLFEGTFGSILHTGDCRLDQECLQSLPKKYLGTRTKEPKCRIDY 241
           F VTAFDANHCPGA+M LFEG FG+ILHTGDCRL  ECLQ+LP+KY+  + KEPKC+ DY
Sbjct: 121 FGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRLIPECLQNLPQKYVTKKGKEPKCQFDY 180

Query: 240 IFLDCTFGRFS-KMPSKHSAIRQVINCIWKHPGAPIVYLTCDMLGQEEILVNVSQTFGSK 64
           +FLDCTFGR S  +PSKH AI+QVINCIWKHP APIVYL  DMLGQEEIL+NVS+ FGSK
Sbjct: 181 VFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVYLCSDMLGQEEILINVSRIFGSK 240

Query: 63  IFVDKEGNPECYQYLKLTVPE 1
           IFVDK  NPEC+Q L   VPE
Sbjct: 241 IFVDKANNPECFQALTHMVPE 261



 Score =  122 bits (306), Expect(2) = 3e-86
 Identities = 55/79 (69%), Positives = 67/79 (84%)
 Frame = -1

Query: 659 MPRGVPFSVDTWTPCSMRKRHRFLTHAHRDHSQGISSFHSFPIYSTSLTKLLTLRYFPQL 480
           MPRG+PFSVDTWTP S +KRH FLTHAH+DHS GIS+  ++PIYST LTK L L+ +PQL
Sbjct: 39  MPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQL 98

Query: 479 NESLFVDIEVGQSIVIHDP 423
           ++SLFV IEVGQS+V+ DP
Sbjct: 99  DDSLFVGIEVGQSMVVDDP 117


>ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 553

 Score =  222 bits (565), Expect(2) = 3e-86
 Identities = 103/141 (73%), Positives = 120/141 (85%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 FTVTAFDANHCPGAIMLLFEGTFGSILHTGDCRLDQECLQSLPKKYLGTRTKEPKCRIDY 241
           FTV+AFDANHCPGA+M LFEG FG+ILHTGDCRL  ECL +LP KY+G + KEP+C +D 
Sbjct: 87  FTVSAFDANHCPGAVMFLFEGKFGNILHTGDCRLTPECLLNLPDKYVGRKGKEPRCPLDC 146

Query: 240 IFLDCTFGRFSK-MPSKHSAIRQVINCIWKHPGAPIVYLTCDMLGQEEILVNVSQTFGSK 64
           +FLDCTFG FS+ MPSKHSAI+QVINCIWKHP A  VYLTC+MLGQEEILVNVS+TFG+K
Sbjct: 147 VFLDCTFGNFSQGMPSKHSAIQQVINCIWKHPDAQTVYLTCNMLGQEEILVNVSETFGAK 206

Query: 63  IFVDKEGNPECYQYLKLTVPE 1
           I+VDK    EC++ L LTVPE
Sbjct: 207 IYVDKAKYSECFENLALTVPE 227



 Score =  123 bits (308), Expect(2) = 3e-86
 Identities = 57/83 (68%), Positives = 71/83 (85%)
 Frame = -1

Query: 671 MPIEMPRGVPFSVDTWTPCSMRKRHRFLTHAHRDHSQGISSFHSFPIYSTSLTKLLTLRY 492
           MPIEMP+G+PFSVDTWTP S  KRH FLTHAH+DHS  I+S  S+PIYST+LTK + L+ 
Sbjct: 1   MPIEMPKGLPFSVDTWTPSSS-KRHCFLTHAHKDHSSSITSHSSYPIYSTNLTKTILLQQ 59

Query: 491 FPQLNESLFVDIEVGQSIVIHDP 423
           +PQL+ SLF++IE+GQS+VIHDP
Sbjct: 60  YPQLDASLFLNIELGQSLVIHDP 82


>gb|ACY01922.1| hypothetical protein [Beta vulgaris]
          Length = 551

 Score =  206 bits (525), Expect(2) = 3e-84
 Identities = 93/141 (65%), Positives = 114/141 (80%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 FTVTAFDANHCPGAIMLLFEGTFGSILHTGDCRLDQECLQSLPKKYLGTRTKEPKCRIDY 241
           FTVTAFDANHCPGA+M LFEG FG+ILHTGDCRL  ECLQ+LP+KY+  + KEP  ++D+
Sbjct: 87  FTVTAFDANHCPGAVMFLFEGEFGNILHTGDCRLTPECLQNLPEKYIARKGKEPSSQLDF 146

Query: 240 IFLDCTFGR-FSKMPSKHSAIRQVINCIWKHPGAPIVYLTCDMLGQEEILVNVSQTFGSK 64
           +FLDCTFG+    +PSK SA++QVINCIWKHP  P VYLTC+MLGQEE+LV V QTFGSK
Sbjct: 147 VFLDCTFGKSLMDIPSKQSALQQVINCIWKHPDVPTVYLTCNMLGQEEVLVKVFQTFGSK 206

Query: 63  IFVDKEGNPECYQYLKLTVPE 1
           I+VDK  +P+ YQ +    P+
Sbjct: 207 IYVDKAKHPDFYQAMGFIAPQ 227



 Score =  131 bits (330), Expect(2) = 3e-84
 Identities = 62/83 (74%), Positives = 69/83 (83%)
 Frame = -1

Query: 671 MPIEMPRGVPFSVDTWTPCSMRKRHRFLTHAHRDHSQGISSFHSFPIYSTSLTKLLTLRY 492
           MPIEMPRG+PFSVDTWTP S  KRH FLTHAH+DH   I+S+ SFPIYST LTK L L Y
Sbjct: 1   MPIEMPRGLPFSVDTWTPNSKFKRHHFLTHAHKDHCSNITSYFSFPIYSTLLTKSLILCY 60

Query: 491 FPQLNESLFVDIEVGQSIVIHDP 423
           FPQL+ESLFV IEVGQSI++ DP
Sbjct: 61  FPQLDESLFVQIEVGQSIIVDDP 83