BLASTX nr result

ID: Bupleurum21_contig00030297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030297
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529010.1| transcription factor, putative [Ricinus comm...    67   2e-09
ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    66   3e-09
ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    66   3e-09
ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [C...    62   5e-08

>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 14/82 (17%)
 Frame = -2

Query: 207 SSGTA-NTFWMLPFXXXXXXXXXXXXXXXPSDQ-------PQMWPFATPQP------NTI 70
           +SGTA +TFWMLP                 S         PQMWPF+T  P      NT+
Sbjct: 390 TSGTAGSTFWMLPVTAGGGGGPAMVATPAASGPAGPSEPVPQMWPFSTATPAAAASGNTL 449

Query: 69  QAPLHFMPRFNVPGNLEFQGGR 4
           QAPLHF+PRFN+P NL+F GGR
Sbjct: 450 QAPLHFVPRFNLPANLDFGGGR 471


>ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like
           [Vitis vinifera]
          Length = 538

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/74 (45%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -2

Query: 207 SSGTANTFWMLPFXXXXXXXXXXXXXXXPS-DQPQMWPFATPQP----NTIQAPLHFMPR 43
           +SG  +TFWMLP                    +P MW   T  P    NT+QAPLHFMPR
Sbjct: 390 NSGAGSTFWMLPVTTGAGGPSAAVGASGAGPSEPHMWALPTAAPTTTGNTLQAPLHFMPR 449

Query: 42  FNVPGNLEFQGGRA 1
           FN+  NL+FQGGRA
Sbjct: 450 FNLASNLDFQGGRA 463


>ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|222838996|gb|EEE77347.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
 Frame = -2

Query: 207 SSGTANTFWMLPFXXXXXXXXXXXXXXXPSDQPQMWPFATPQP---NTIQAPLHFMPRFN 37
           SSG  NTFWMLP                   +PQ+WPFAT  P   N +QAPLHF+PRFN
Sbjct: 402 SSGAGNTFWMLPMTAGA------------GGEPQIWPFATATPASGNPLQAPLHFVPRFN 449

Query: 36  VP-GNLEFQGGR 4
           +P  +LEFQ GR
Sbjct: 450 LPTTSLEFQRGR 461


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/74 (45%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -2

Query: 207 SSGTANTFWMLPFXXXXXXXXXXXXXXXPS-DQPQMWPFATPQP----NTIQAPLHFMPR 43
           +SG  +TFWMLP                    +P MW   T  P    NT+QAPLHFMPR
Sbjct: 402 NSGAGSTFWMLPVTTGAGGPSAAVGASGAGPSEPHMWALPTAAPTATGNTLQAPLHFMPR 461

Query: 42  FNVPGNLEFQGGRA 1
           FN+  NL+FQGGRA
Sbjct: 462 FNLASNLDFQGGRA 475


>ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [Cucumis sativus]
          Length = 505

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
 Frame = -2

Query: 207 SSGTANTFWMLPFXXXXXXXXXXXXXXXPS----------DQPQMWPFATPQPNTIQAPL 58
           SSG +NTFWMLP                            +  QMWPF+T   NT+QAPL
Sbjct: 318 SSGASNTFWMLPVTAGSGGGNVGNSSGGGGGGGGGGDGGLEAHQMWPFST-SGNTLQAPL 376

Query: 57  HFMPRFNVPGNLEFQGG 7
           H MPRFN+PG +E Q G
Sbjct: 377 HLMPRFNIPGGVEIQAG 393


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