BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030277
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    80   4e-13
gb|AAR15502.1| F-box protein [Arabidopsis arenosa]                     80   5e-13
gb|AAR15451.1| F-box protein [Arabidopsis arenosa]                     79   1e-12
ref|NP_196378.1| F-box protein [Arabidopsis thaliana] gi|7526267...    76   7e-12
ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10

>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 60/151 (39%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
 Frame = +3

Query: 204 FTTVSKLWQSLITAPRFS--MLRGNHSLPLCTTGLFFQVNVCKIRVPNFI--TFVSLNND 371
           F  VSK W SLIT P FS  +++ NH LP+  +G F       +  P  I  +FVSL+++
Sbjct: 53  FKRVSKRWLSLITNPDFSNRIIKSNHPLPI--SGFF-------LHSPRAIKYSFVSLDDE 103

Query: 372 NHTTSP--FSQLPFAYARDPDNHT-IRILHSCAGLLLCSSCTYKVPTTKSRYYIYNPTTS 542
           +  T+    S LP  +    D+ T + I+ S  GLLLC           + YY+YNPTT 
Sbjct: 104 DDATNQRISSSLPLWFT---DHQTDMIIMQSTNGLLLCQCSCASSNHFNTNYYVYNPTTK 160

Query: 543 LLRPLPNNDRIDWHYAALVAFDPSKSPHYRV 635
               LP   +I  H A  +AFDPSKSPHY+V
Sbjct: 161 QYTLLP---QITGHIALSLAFDPSKSPHYKV 188


>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
 Frame = +3

Query: 204 FTTVSKLWQSLITAPRFS--MLRGNHSLPLCTTGLFFQVNVCKIRVPNFI--TFVSLNND 371
           F  VSK W SLIT P FS  +++ NH LP+  +G F       +  P  I  +FVSL+++
Sbjct: 53  FKRVSKRWLSLITNPDFSNRIIKSNHPLPI--SGFF-------LHSPRAIKYSFVSLDDE 103

Query: 372 NHTTSP--FSQLPFAYARDPDNHTIRILHSCAGLLLCSSCTYKVPTTKSRYYIYNPTTSL 545
           +  T+    S LP  +  D  +  I I+ S  GLLLC           + YY+YNPTT  
Sbjct: 104 DDATNQRISSSLPLWFT-DHQSDMI-IMQSTNGLLLCKCSCASSNHFNTNYYVYNPTTKQ 161

Query: 546 LRPLPNNDRIDWHYAALVAFDPSKSPHYRV 635
              LP   +I  H A  +AFDPSKSPHY+V
Sbjct: 162 YTLLP---QITGHIALSLAFDPSKSPHYKV 188


>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
 Frame = +3

Query: 204 FTTVSKLWQSLITAPRFS--MLRGNHSLPLCTTGLFFQVNVCKIRVPNFITFVSLNNDNH 377
           F  VSK W SLIT P FS  +++ NH LP+  +G F        R   + +FVSL++++ 
Sbjct: 53  FKRVSKRWLSLITNPDFSNRVIKSNHPLPI--SGFFLH----SPRAFKY-SFVSLDDEDD 105

Query: 378 TTSP--FSQLPFAYARDPDNHT-IRILHSCAGLLLCSSCTYKVPTTKSRYYIYNPTTSLL 548
            T+    S LP  +    D+ T + I+ S  GLLLC           + YY+YNPTT   
Sbjct: 106 ATNQRVSSSLPLWFT---DHQTDMIIMQSTNGLLLCKCSCASSNHFNTNYYVYNPTTKQY 162

Query: 549 RPLPNNDRIDWHYAALVAFDPSKSPHYRV 635
             LP   +I  H A  +AFDPSKSPHY+V
Sbjct: 163 TLLP---QITGHIALSLAFDPSKSPHYKV 188


>ref|NP_196378.1| F-box protein [Arabidopsis thaliana]
           gi|75262676|sp|Q9FLS0.1|FB253_ARATH RecName: Full=F-box
           protein At5g07610 gi|9759582|dbj|BAB11439.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332003802|gb|AED91185.1| F-box protein [Arabidopsis
           thaliana]
          Length = 420

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
 Frame = +3

Query: 204 FTTVSKLWQSLITAPRFS--MLRGNHSLPLCTTGLFFQVNVCKIRVPNFITFVSLNNDNH 377
           F  VSK W SLIT P FS  +++ NH LP+     FF  +  +I+     +FVSL++D  
Sbjct: 53  FKRVSKRWLSLITNPVFSNRVIKSNHPLPISG---FFLHSPREIKY----SFVSLDDDAT 105

Query: 378 TTSPFSQLPFAYARDPDNHT-IRILHSCAGLLLCSSCTYKVPTTKSRYYIYNPTTSLLRP 554
                S LP  +    D+ T + I+ S  GLLLC           + YY+YNPTT     
Sbjct: 106 NQRISSSLPLWFT---DHQTDMIIMQSTNGLLLCKCSCASSNHFNTNYYVYNPTTKQYTL 162

Query: 555 LPNNDRIDWHYAALVAFDPSKSPHYRV 635
           L    +I  H A  +AFDPS+SPHY+V
Sbjct: 163 L---HQIAGHIALSLAFDPSRSPHYKV 186


>ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|222858113|gb|EEE95660.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
 Frame = +3

Query: 114 VELSSIEKVISDQDXXXXXXXXXXXXXXXCFTTVSKLWQSLITAPRFSMLRGNHSLPLCT 293
           V LSS E + S+QD                F +VSK W SLI+ P+F +    H   L  
Sbjct: 4   VSLSSAEIIASNQDLLTEILIRIPAKPLLKFKSVSKQWLSLISDPKFCIWHACHQRVLNP 63

Query: 294 TGLFFQVNVCKIRVPNFITFVSLNNDNHTTSPFSQLP-FAYARDPDNHTIRILHSCAGLL 470
           T     +N      P F  F+ L  D+  +S +SQ   F Y     N+ ++I +SC GL+
Sbjct: 64  TPNALLLNNFYSSTPTF-QFIPLIGDD--SSSYSQAAVFDYLNVSPNYRLKIKNSCNGLI 120

Query: 471 LCSS----CTYKVPTTKSRYYIYNPTT----SLLRPLP---NNDRIDWHYAALVAFDPSK 617
           LC S    C +    ++ +  I NPTT    +L  P+P   N+      Y   +AFDP K
Sbjct: 121 LCMSIFYGCGFDDAGSELKGIICNPTTKQFKTLSFPVPKFGNSKTYSSFYG--LAFDPLK 178

Query: 618 SPHYRVIMCGRPIIPGPAHKQFFIYSS 698
           S HY++I C         + Q ++YSS
Sbjct: 179 SHHYKII-CLHVDYRVSKNPQIYLYSS 204