BLASTX nr result

ID: Bupleurum21_contig00030270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030270
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vi...    73   3e-11
emb|CBI31248.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002525505.1| histidyl-tRNA synthetase, putative [Ricinus ...    56   3e-06

>ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]
          Length = 890

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
 Frame = +3

Query: 9   RFISRNLHAKSRVFLNS-------LTAGSGIVVLLTSLGKALLNLGESCWHRANLIVGSL 167
           R + R +H ++RV LNS       + AG  +  +++ L  +L  LGES   RAN+ + S+
Sbjct: 217 REVVRMVHLRTRVELNSGGKVDKAVGAGKAVATVVSPLAASLRYLGESSLSRANMNLNSI 276

Query: 168 GNNEATPYISHFIEMFRSQCPGIDRLKELYNSSKGADSGGDNLKFAHDIYVLSDLVRTIL 347
           G++      S  + +F  +CP ID LK  Y     A    D +KF H++  L  +V  I+
Sbjct: 277 GSDNLR---SSLVGLFEGKCPSIDGLKNAYRLISEAVFEEDYVKFLHEVNGLLGMVWEIV 333

Query: 348 SWEAIAAFISV 380
            WEAI AF+S+
Sbjct: 334 IWEAITAFVSL 344


>emb|CBI31248.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
 Frame = +3

Query: 9   RFISRNLHAKSRVFLNS-------LTAGSGIVVLLTSLGKALLNLGESCWHRANLIVGSL 167
           R + R +H ++RV LNS       + AG  +  +++ L  +L  LGES   RAN+ + S+
Sbjct: 184 REVVRMVHLRTRVELNSGGKVDKAVGAGKAVATVVSPLAASLRYLGESSLSRANMNLNSI 243

Query: 168 GNNEATPYISHFIEMFRSQCPGIDRLKELYNSSKGADSGGDNLKFAHDIYVLSDLVRTIL 347
           G++      S  + +F  +CP ID LK  Y     A    D +KF H++  L  +V  I+
Sbjct: 244 GSDNLR---SSLVGLFEGKCPSIDGLKNAYRLISEAVFEEDYVKFLHEVNGLLGMVWEIV 300

Query: 348 SWEAIAAFISV 380
            WEAI AF+S+
Sbjct: 301 IWEAITAFVSL 311


>ref|XP_002525505.1| histidyl-tRNA synthetase, putative [Ricinus communis]
           gi|223535184|gb|EEF36863.1| histidyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 886

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
 Frame = +3

Query: 27  LHAKSRVFLNSLTA---GSGIVVLLTSLGKALLNLGESCWHRANLIVGSLGNNEATPYIS 197
           +H+ +RV LNS      G  I  +L +   A+L LG+S   RA + +  +GN      + 
Sbjct: 228 VHSVTRVALNSRDEAYEGDAIPAVL-AFAAAVLKLGKSSLCRAKMNLDVIGNESLRKGL- 285

Query: 198 HFIEMFRSQCPGIDRLKELYNSSKGADSGGDNLKFAHDIYVLSDLVRTILSWEAIAAFIS 377
             I MF  +C   D L   Y     +    DN KF H++  L  +V  +++WE IAAF+ 
Sbjct: 286 --ISMFDIKCANEDVLMNAYRLVLNSSFEEDNGKFVHEVNGLLGIVWKVVAWEGIAAFV- 342

Query: 378 VSLISGADIFIPKSNGPEVEATNYAGADN 464
             ++ G ++     +G  VEA    G D+
Sbjct: 343 --VLEGGELM----SGNRVEAVEINGKDD 365


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