BLASTX nr result

ID: Bupleurum21_contig00030266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030266
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   200   1e-49
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   197   1e-48
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   185   4e-45
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   179   3e-43
gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subc...   162   2e-38

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  200 bits (508), Expect = 1e-49
 Identities = 101/166 (60%), Positives = 122/166 (73%)
 Frame = -1

Query: 500  LSSGLPQSMWGEAILSANHLLNMMIRKNKDASPYEMWKKKKPSYQNLKVWGCLAKVLIPT 321
            +SS LPQ+MWGEAIL+AN+LLN + +K  + +PYE+WK +KPSY  L++WGCLAKV +P 
Sbjct: 647  ISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPP 706

Query: 320  PKKVKIGPKTVDCIFIGYPPHSTAYRFLVYDSKIPEIQKNTIMESRNASFFETVFPCNPN 141
            PKKVKIGPKT+DCIFIGY  +S AYRFLVY+S IP+I KNTIMESRNASFFE VFPC  +
Sbjct: 707  PKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCK-S 765

Query: 140  VERPTTSKRTHXXXXXXXXXXXXXXXXVGVRRSKRQRKEKSFGTEF 3
             E P++SKR                  V  RRSKR R EKSFG +F
Sbjct: 766  KEEPSSSKR------MLESQDQNEEVEVEPRRSKRVRTEKSFGPDF 805


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  197 bits (500), Expect = 1e-48
 Identities = 100/166 (60%), Positives = 121/166 (72%)
 Frame = -1

Query: 500  LSSGLPQSMWGEAILSANHLLNMMIRKNKDASPYEMWKKKKPSYQNLKVWGCLAKVLIPT 321
            +SS LPQ+MWGEAIL+AN+LLN + +K  + +PYE+WK +KPSY  L++WGCLAKV +  
Sbjct: 549  ISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVSP 608

Query: 320  PKKVKIGPKTVDCIFIGYPPHSTAYRFLVYDSKIPEIQKNTIMESRNASFFETVFPCNPN 141
            PKKVKIGPKT+DCIFIGY  +S AYRFLVY+S IP+I KNTIMESRNASFFE VFPC  +
Sbjct: 609  PKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCK-S 667

Query: 140  VERPTTSKRTHXXXXXXXXXXXXXXXXVGVRRSKRQRKEKSFGTEF 3
             E P++SKR                  V  RRSKR R EKSFG +F
Sbjct: 668  KEEPSSSKR------MLKSQDQNEEVEVEPRRSKRVRTEKSFGPDF 707


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  185 bits (469), Expect = 4e-45
 Identities = 83/119 (69%), Positives = 100/119 (84%)
 Frame = -1

Query: 500  LSSGLPQSMWGEAILSANHLLNMMIRKNKDASPYEMWKKKKPSYQNLKVWGCLAKVLIPT 321
            +S  LPQ+MWGEAIL+AN+LLN + +K  + +PYE+WK +KPSY  L++WGCLAKV +P 
Sbjct: 647  ISFSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPP 706

Query: 320  PKKVKIGPKTVDCIFIGYPPHSTAYRFLVYDSKIPEIQKNTIMESRNASFFETVFPCNP 144
            PKKVKIGPKT+DCIFIGY  +S AYRFLVY+S IP+I KNTIMESRNASFFE VFPC P
Sbjct: 707  PKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCEP 765


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  179 bits (453), Expect = 3e-43
 Identities = 90/166 (54%), Positives = 115/166 (69%)
 Frame = -1

Query: 500 LSSGLPQSMWGEAILSANHLLNMMIRKNKDASPYEMWKKKKPSYQNLKVWGCLAKVLIPT 321
           +SSGLPQ++W EAIL ANH+LN +  KNKD + YE+WK  KPSY+ LKVW CL KV++  
Sbjct: 303 ISSGLPQNLWREAILFANHILNKIPHKNKDVTSYELWKGHKPSYKYLKVWECLTKVVLQK 362

Query: 320 PKKVKIGPKTVDCIFIGYPPHSTAYRFLVYDSKIPEIQKNTIMESRNASFFETVFPCNPN 141
           PK+VKIGPKT+DCIFIGY  +S+AY FLV+ S IP+I ++TI+ESRNASFFE +FPC   
Sbjct: 363 PKQVKIGPKTIDCIFIGYANNSSAYHFLVHKSSIPDIHEDTIIESRNASFFENIFPCKEK 422

Query: 140 VERPTTSKRTHXXXXXXXXXXXXXXXXVGVRRSKRQRKEKSFGTEF 3
            E  + +KRT+                   R SKR +K KSFG E+
Sbjct: 423 QE-VSLNKRTYDTANGNHQNEEEP------RCSKRAKKTKSFGLEY 461


>gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1336

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 14/179 (7%)
 Frame = -1

Query: 497  SSGLPQSMWGEAILSANHLLNMMIRKNKDASPYEMWKKKKPSYQNLKVWGCLAKVLIPTP 318
            ++GLP++ WGEA+L++NH+LN +  +NKD +PYE+W  +KPS   L+ WGCLAKV +P  
Sbjct: 611  TAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPIT 670

Query: 317  KKVKIGPKTVDCIFIGYPPHSTAYRFLVYDSKIPEIQKNTIMESRNASFFETVFPCN--- 147
            KK K+GPKTVDC+F+GY  HS AYRFL+  S++P++   TIMESR+A+FFE+ FP     
Sbjct: 671  KKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTH 730

Query: 146  ----------PN-VERPTTSKRTHXXXXXXXXXXXXXXXXVGVRRSKRQRKEKSFGTEF 3
                      PN +  P  ++ TH                   RRSKRQR  KSFG +F
Sbjct: 731  SGSNQPSEIIPNSITPPEQTEHTH-------ELVSEEDVSEAPRRSKRQRTAKSFGDDF 782


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