BLASTX nr result

ID: Bupleurum21_contig00030259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030259
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309099.1| copper transporter [Populus trichocarpa] gi|...   122   3e-26
ref|XP_002273204.1| PREDICTED: copper transporter 6 [Vitis vinif...   115   3e-24
gb|AFK49213.1| unknown [Medicago truncatula]                          111   6e-23
ref|XP_004147932.1| PREDICTED: copper transporter 6-like [Cucumi...   110   1e-22
ref|NP_001238406.1| uncharacterized protein LOC100527849 [Glycin...   110   2e-22

>ref|XP_002309099.1| copper transporter [Populus trichocarpa]
           gi|222855075|gb|EEE92622.1| copper transporter [Populus
           trichocarpa]
          Length = 148

 Score =  122 bits (307), Expect = 3e-26
 Identities = 60/109 (55%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = -2

Query: 348 EMIMHMNFYWGKDVLILFQGWPRDSLAMYIXXXXXXXXXXXATEILSVPQVVKSGS-SPM 172
           +M+MHM+FYWGKD +ILF GWP  SL MY+           A EI SV    K G+ +P+
Sbjct: 26  DMMMHMSFYWGKDAIILFSGWPNGSLGMYMLAFFCVFLLAAAIEIFSVSPTAKRGTHNPI 85

Query: 171 SGLLIQAIVHVVRMGLAYLVMLSVMSYNLGIFLVAVTGHGLGFLLVKIR 25
           +G LIQ  V+ VRMG AY+VML+VMS+NLGIF+ AV GH +GF LVK+R
Sbjct: 86  AGALIQTCVYAVRMGFAYMVMLAVMSFNLGIFIAAVAGHTVGFFLVKVR 134


>ref|XP_002273204.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496074|gb|ADW93914.1| copper transporter [Vitis
           vinifera]
          Length = 139

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/119 (49%), Positives = 73/119 (61%)
 Frame = -2

Query: 381 MIMPRGATNMYEMIMHMNFYWGKDVLILFQGWPRDSLAMYIXXXXXXXXXXXATEILSVP 202
           M MP    NM  M+M  +FYW KD +ILF GWP  S  MYI           A E+LS+P
Sbjct: 7   MDMPPSDDNMM-MMMQNSFYWSKDAIILFSGWPNHSPFMYILALLFVFLLAVAVEVLSIP 65

Query: 201 QVVKSGSSPMSGLLIQAIVHVVRMGLAYLVMLSVMSYNLGIFLVAVTGHGLGFLLVKIR 25
             +K G+ P    L Q +VH VRMGL YLVML+VMS+N+G+ LVA+ GH +GF L K R
Sbjct: 66  PTLKQGTIPTVAALTQTVVHAVRMGLGYLVMLAVMSFNVGVLLVAIAGHAVGFFLNKYR 124


>gb|AFK49213.1| unknown [Medicago truncatula]
          Length = 137

 Score =  111 bits (278), Expect = 6e-23
 Identities = 53/106 (50%), Positives = 67/106 (63%)
 Frame = -2

Query: 348 EMIMHMNFYWGKDVLILFQGWPRDSLAMYIXXXXXXXXXXXATEILSVPQVVKSGSSPMS 169
           +M MHMN YWGKD +ILF GWP  SL MYI             E L     +K G++ + 
Sbjct: 10  DMKMHMNLYWGKDAIILFPGWPNQSLGMYILALSFVFFLALVVEFLPNKSTIKQGTNHIK 69

Query: 168 GLLIQAIVHVVRMGLAYLVMLSVMSYNLGIFLVAVTGHGLGFLLVK 31
           G LIQAI++  R+   YLVML+VMS+N+GIF+ AV GH +GF LVK
Sbjct: 70  GGLIQAIIYFFRISFLYLVMLAVMSFNIGIFIAAVVGHTIGFFLVK 115


>ref|XP_004147932.1| PREDICTED: copper transporter 6-like [Cucumis sativus]
           gi|449519529|ref|XP_004166787.1| PREDICTED: copper
           transporter 6-like [Cucumis sativus]
          Length = 150

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/107 (51%), Positives = 70/107 (65%)
 Frame = -2

Query: 345 MIMHMNFYWGKDVLILFQGWPRDSLAMYIXXXXXXXXXXXATEILSVPQVVKSGSSPMSG 166
           M M M+FYWGKD +ILF  WP++SL +YI           A E LS     K G SP++ 
Sbjct: 31  MNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPLAS 90

Query: 165 LLIQAIVHVVRMGLAYLVMLSVMSYNLGIFLVAVTGHGLGFLLVKIR 25
             +QA V+  R GLAYLVML+VMS+N+GIF+ AV GH LGF +VK+R
Sbjct: 91  ASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLR 137


>ref|NP_001238406.1| uncharacterized protein LOC100527849 [Glycine max]
           gi|255633370|gb|ACU17042.1| unknown [Glycine max]
          Length = 146

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/111 (47%), Positives = 72/111 (64%)
 Frame = -2

Query: 357 NMYEMIMHMNFYWGKDVLILFQGWPRDSLAMYIXXXXXXXXXXXATEILSVPQVVKSGSS 178
           N   M+MH +FYWGKD ++LF  WP +++ MYI           A E+LS   ++K G+S
Sbjct: 17  NNMSMMMHNSFYWGKDAIVLFPRWPENNVGMYILALIFVFFLAMAVEVLSNQPLLKPGTS 76

Query: 177 PMSGLLIQAIVHVVRMGLAYLVMLSVMSYNLGIFLVAVTGHGLGFLLVKIR 25
           P+ G LIQA V + R+G  Y+VML+VMS+N GIF+ AV GH LGF + K R
Sbjct: 77  PLVGGLIQAGVRLFRIGFVYMVMLAVMSFNAGIFIAAVVGHTLGFFVAKFR 127


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