BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030246
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    73   2e-11
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    62   4e-08
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               60   2e-07
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    59   3e-07

>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
 Frame = +1

Query: 4    RLSTKHRLTRFGIMQSATCGFCGNADETESHLFFSCVYSS----SIIAACPYPIPTDLHN 171
            RL T  RLT FGI+ S+TC  CG  +ET  HLFF C YSS    +I A      P+   N
Sbjct: 806  RLHTMDRLTSFGIIPSSTCVLCGMHNETHDHLFFQCTYSSILWGNISAKTLIAWPSLTWN 865

Query: 172  ---IVSSSAYSSGNSFQRQIIQLFVSTAIYFIWQQRNARIWN 288
               + + S   +   F   I +L +ST++YFIW +RN RI+N
Sbjct: 866  GLLLWAGSTLRNNKEFSHIIARLVLSTSVYFIWFERNNRIFN 907


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = +1

Query: 4   RLSTKHRLTRFGIMQSATCGFCGNADETESHLFFSCVYS----SSIIAACPYPIPTDLHN 171
           RL+T  RL +FGI+    C  CGN DET  HLFF C +S    SS++             
Sbjct: 25  RLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEFSYEIWSSLLCWLGIQRTAGDWQ 84

Query: 172 IVSSSAYSSGNSFQRQIIQLFVSTAIYFIWQQRNARIWNPSDAKSPSQTIRCIKEVIRQK 351
            V  SA+   NS    I ++ +S A+YFIW++RNAR +     K P + +R  +     K
Sbjct: 85  GVLQSAHCQSNSSASCIFRMCISIAVYFIWRERNARKFQQVKMK-PDEIVRNDQNCYLLK 143

Query: 352 IFS 360
           +FS
Sbjct: 144 VFS 146


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = +1

Query: 4   RLSTKHRLTRFGIMQSATCGFCGNADETESHLFFSCVYSSSI-----IAACPYPIPTDLH 168
           RL T+ RLT++G+     C  C   DET  HLFF C +S+ I     I A   P P    
Sbjct: 178 RLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMTP-PHLFG 236

Query: 169 NIVSSSAYSSGNSFQRQIIQLFVSTAIYFIWQQRNARIWNPSDAKSPSQTIRCIKEVIRQ 348
            I+     +S +     II+L    ++Y IW++RN RI + + +++P   I+ ++++IR 
Sbjct: 237 PILLWLKSASSSKNLSLIIKLLFQASVYLIWRERNCRI-HTTHSRTPPTIIKEVQQLIRA 295

Query: 349 KI 354
           ++
Sbjct: 296 RL 297


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
 Frame = +1

Query: 4    RLSTKHRLTRFGIMQSATCGFCGNADETESHLFFSCVYSSSI-----IAACPYPIPTDLH 168
            RL T+ RL R+G     TC  C + DE+  HLFF C +SS I      A    P P  +H
Sbjct: 1010 RLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSSEIWSFFMRALNLNPPPQFMH 1069

Query: 169  NIVSSSAYSSGNSFQRQIIQLFVSTAIYFIWQQRNARIWNPSDAKSPSQTIRCIKEVIRQ 348
             ++ +   S   +    I +L    ++YFIW++RN RI + +  +     I+ I+ ++R 
Sbjct: 1070 CLLWTLTASRDRNI-TLITKLLFHASVYFIWRERNLRI-HSNSVRPAHLIIKEIQLIVRA 1127

Query: 349  KIFSCNQFRKHISK 390
            ++   ++  + +S+
Sbjct: 1128 RLDPLSRSSRVVSQ 1141


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
 Frame = +1

Query: 4    RLSTKHRLTRFGIMQSATCGFCGNADETESHLFFSCVYSSSIIAACPYPI-----PTDLH 168
            RLST  R+  +   Q  TC  C NA+ET  HLFFSC Y+S +  A    +       D +
Sbjct: 1378 RLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWN 1437

Query: 169  NIVSSSAYSSGNSFQRQIIQLFVSTAIYFIWQQRNARIWNPSDAKSP-SQTIRCIKEVIR 345
             + +    S+       + +     +IY IW++RNAR     +  SP ++ I+ I + +R
Sbjct: 1438 RLFTLLCTSNLPRDHLFLFRYVFQASIYHIWRERNAR--RHGEISSPTNRLIKLIDKTVR 1495

Query: 346  QKIFSCNQFRKH 381
             +I S      H
Sbjct: 1496 NRISSIRDTGDH 1507