BLASTX nr result
ID: Bupleurum21_contig00030244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030244
(1126 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263... 261 2e-67
emb|CBI36804.3| unnamed protein product [Vitis vinifera] 259 7e-67
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 230 4e-58
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ... 230 4e-58
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia... 230 4e-58
>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 261 bits (667), Expect = 2e-67
Identities = 151/301 (50%), Positives = 191/301 (63%), Gaps = 14/301 (4%)
Frame = +3
Query: 264 PVVERYEATSVQNKVLDDCLPFFVIDNPER--------SEDHNHGKGVMGIPAHFQNDGS 419
P + ++ A Q +LD+ +PFFV D E ++ +NH + MG+P H+QNDGS
Sbjct: 134 PFLLQFLAGVFQGTILDEFIPFFVGDCQEEKKVWNKCYNDLNNHQEVGMGVPTHYQNDGS 193
Query: 420 YLYMLTPAISPPSADIVDRWLLQDATGLLGSQVDSHSSLADGCRDPVLESGSLPREDIII 599
+LY+LTP SPPSAD V RWLL D T D +P L GS+ ++
Sbjct: 194 FLYLLTPVFSPPSADCVHRWLLHDDT--------------DTSAEP-LPVGSVSHVKPVL 238
Query: 600 AHVKQQRGGSCSAKSRPLHS---DETKLFGNDGTT---FIVSEDISQISGPDGISKLTPL 761
+ + +AK H ++T++ GN S+DISQISGP+ SK TPL
Sbjct: 239 DQQNHEIHDNLNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISGPEEKSKPTPL 298
Query: 762 SQIGFRDPASVGGGQQLTIFSIEVQAQSKGDSRPDPRLDAVNLIVLVILEDDDMITETHV 941
SQIGFRDPASVGGGQQ+T+ SIE+QA+S+GD RPDPR DA+N+IVL+I EDDD E V
Sbjct: 299 SQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQEDDDSALEVFV 358
Query: 942 FIRSDTLHAQRHLDGISGCKILVFSEEKDLFNHFIKVICSSDPDILMGGDIQGGSLGFLA 1121
RS+ QR LDGISGCK+LV SEEK LF+ FI +ICS DPDIL+G DIQGGSLGFLA
Sbjct: 359 LCRSNIEPCQRKLDGISGCKVLVSSEEKLLFDDFINIICSFDPDILIGWDIQGGSLGFLA 418
Query: 1122 E 1124
E
Sbjct: 419 E 419
>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 259 bits (663), Expect = 7e-67
Identities = 149/290 (51%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Frame = +3
Query: 297 QNKVLDDCLPFFVIDNPER--------SEDHNHGKGVMGIPAHFQNDGSYLYMLTPAISP 452
Q +LD+ +PFFV D E ++ +NH + MG+P H+QNDGS+LY+LTP SP
Sbjct: 731 QGTILDEFIPFFVGDCQEEKKVWNKCYNDLNNHQEVGMGVPTHYQNDGSFLYLLTPVFSP 790
Query: 453 PSADIVDRWLLQDATGLLGSQVDSHSSLADGCRDPVLESGSLPREDIIIAHVKQQRGGSC 632
PSAD V RWLL D T D +P L GS+ ++ + +
Sbjct: 791 PSADCVHRWLLHDDT--------------DTSAEP-LPVGSVSHVKPVLDQQNHEIHDNL 835
Query: 633 SAKSRPLHS---DETKLFGNDGTT---FIVSEDISQISGPDGISKLTPLSQIGFRDPASV 794
+AK H ++T++ GN S+DISQISGP+ SK TPLSQIGFRDPASV
Sbjct: 836 NAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISGPEEKSKPTPLSQIGFRDPASV 895
Query: 795 GGGQQLTIFSIEVQAQSKGDSRPDPRLDAVNLIVLVILEDDDMITETHVFIRSDTLHAQR 974
GGGQQ+T+ SIE+QA+S+GD RPDPR DA+N+IVL+I EDDD E V RS+ QR
Sbjct: 896 GGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQEDDDSALEVFVLCRSNIEPCQR 955
Query: 975 HLDGISGCKILVFSEEKDLFNHFIKVICSSDPDILMGGDIQGGSLGFLAE 1124
LDGISGCK+LV SEEK LF+ FI +ICS DPDIL+G DIQGGSLGFLAE
Sbjct: 956 KLDGISGCKVLVSSEEKLLFDDFINIICSFDPDILIGWDIQGGSLGFLAE 1005
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 230 bits (587), Expect = 4e-58
Identities = 146/371 (39%), Positives = 199/371 (53%), Gaps = 9/371 (2%)
Frame = +3
Query: 39 TISTSHIHTGCSSFGQQCMDTCVNSDNTMPMVVTTEPNPKELIGMSYYRKPPHLPLTDWE 218
T+ +S+IH G +D+ S LI ++ +KPP L
Sbjct: 788 TLVSSNIHVGIE------IDSVQKSGREQESTANETDETGRLICLTLSKKPPSLDCLSAG 841
Query: 219 SRNVPPSSAVLVYPYPVVERYEATSVQNKVLDDCLPFFVIDNPERSEDHNHGKGVMGIPA 398
++ S + E YE S + +PFF +++ + + H +GIP
Sbjct: 842 LQDSAHSHEIHAREKQHDE-YEGNS-------NDIPFFPLEDNKEEKKHFFQGTSLGIPL 893
Query: 399 HFQNDGSYLYMLTPAISPPSADIVDRWLLQDATGLLGSQVDSHSS-LADGCRDPVLESGS 575
H NDGS LY+LTPA SPPS D V +W+ D S +DS L D D
Sbjct: 894 HHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGD---SNIDSEKQPLRDNHNDRGASFTD 950
Query: 576 LPREDIIIA---HVKQQRGGSCSAKSRPLHSDETKL-----FGNDGTTFIVSEDISQISG 731
L +++ HV+Q +++S E L F N VS+++SQISG
Sbjct: 951 LASASNVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISG 1010
Query: 732 PDGISKLTPLSQIGFRDPASVGGGQQLTIFSIEVQAQSKGDSRPDPRLDAVNLIVLVILE 911
PDG S TPLSQ+GFRDPAS+G GQQLTI SIEV A+S+GD RPDPR D+VN+I LV+
Sbjct: 1011 PDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQN 1070
Query: 912 DDDMITETHVFIRSDTLHAQRHLDGISGCKILVFSEEKDLFNHFIKVICSSDPDILMGGD 1091
DD + E V + S QR++DG+SGCK+ VF EE+ LF +FI+ +C DPD+L+G D
Sbjct: 1071 DDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWD 1130
Query: 1092 IQGGSLGFLAE 1124
IQGGS+GFLAE
Sbjct: 1131 IQGGSIGFLAE 1141
>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 230 bits (587), Expect = 4e-58
Identities = 146/371 (39%), Positives = 199/371 (53%), Gaps = 9/371 (2%)
Frame = +3
Query: 39 TISTSHIHTGCSSFGQQCMDTCVNSDNTMPMVVTTEPNPKELIGMSYYRKPPHLPLTDWE 218
T+ +S+IH G +D+ S LI ++ +KPP L
Sbjct: 788 TLVSSNIHVGIE------IDSVQKSGREQESTANETDETGRLICLTLSKKPPSLDCLSAG 841
Query: 219 SRNVPPSSAVLVYPYPVVERYEATSVQNKVLDDCLPFFVIDNPERSEDHNHGKGVMGIPA 398
++ S + E YE S + +PFF +++ + + H +GIP
Sbjct: 842 LQDSAHSHEIHAREKQHDE-YEGNS-------NDIPFFPLEDNKEEKKHFFQGTSLGIPL 893
Query: 399 HFQNDGSYLYMLTPAISPPSADIVDRWLLQDATGLLGSQVDSHSS-LADGCRDPVLESGS 575
H NDGS LY+LTPA SPPS D V +W+ D S +DS L D D
Sbjct: 894 HHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGD---SNIDSEKQPLRDNHNDRGASFTD 950
Query: 576 LPREDIIIA---HVKQQRGGSCSAKSRPLHSDETKL-----FGNDGTTFIVSEDISQISG 731
L +++ HV+Q +++S E L F N VS+++SQISG
Sbjct: 951 LASASNVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISG 1010
Query: 732 PDGISKLTPLSQIGFRDPASVGGGQQLTIFSIEVQAQSKGDSRPDPRLDAVNLIVLVILE 911
PDG S TPLSQ+GFRDPAS+G GQQLTI SIEV A+S+GD RPDPR D+VN+I LV+
Sbjct: 1011 PDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQN 1070
Query: 912 DDDMITETHVFIRSDTLHAQRHLDGISGCKILVFSEEKDLFNHFIKVICSSDPDILMGGD 1091
DD + E V + S QR++DG+SGCK+ VF EE+ LF +FI+ +C DPD+L+G D
Sbjct: 1071 DDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWD 1130
Query: 1092 IQGGSLGFLAE 1124
IQGGS+GFLAE
Sbjct: 1131 IQGGSIGFLAE 1141
>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|34330129|dbj|BAC82450.1| catalytic subunit of
polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1890
Score = 230 bits (587), Expect = 4e-58
Identities = 146/371 (39%), Positives = 199/371 (53%), Gaps = 9/371 (2%)
Frame = +3
Query: 39 TISTSHIHTGCSSFGQQCMDTCVNSDNTMPMVVTTEPNPKELIGMSYYRKPPHLPLTDWE 218
T+ +S+IH G +D+ S LI ++ +KPP L
Sbjct: 784 TLVSSNIHVGIE------IDSVQKSGREQESTANETDETGRLICLTLSKKPPSLDCLSAG 837
Query: 219 SRNVPPSSAVLVYPYPVVERYEATSVQNKVLDDCLPFFVIDNPERSEDHNHGKGVMGIPA 398
++ S + E YE S + +PFF +++ + + H +GIP
Sbjct: 838 LQDSAHSHEIHAREKQHDE-YEGNS-------NDIPFFPLEDNKEEKKHFFQGTSLGIPL 889
Query: 399 HFQNDGSYLYMLTPAISPPSADIVDRWLLQDATGLLGSQVDSHSS-LADGCRDPVLESGS 575
H NDGS LY+LTPA SPPS D V +W+ D S +DS L D D
Sbjct: 890 HHLNDGSNLYLLTPAFSPPSVDSVLQWISNDKGD---SNIDSEKQPLRDNHNDRGASFTD 946
Query: 576 LPREDIIIA---HVKQQRGGSCSAKSRPLHSDETKL-----FGNDGTTFIVSEDISQISG 731
L +++ HV+Q +++S E L F N VS+++SQISG
Sbjct: 947 LASASNVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISG 1006
Query: 732 PDGISKLTPLSQIGFRDPASVGGGQQLTIFSIEVQAQSKGDSRPDPRLDAVNLIVLVILE 911
PDG S TPLSQ+GFRDPAS+G GQQLTI SIEV A+S+GD RPDPR D+VN+I LV+
Sbjct: 1007 PDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQN 1066
Query: 912 DDDMITETHVFIRSDTLHAQRHLDGISGCKILVFSEEKDLFNHFIKVICSSDPDILMGGD 1091
DD + E V + S QR++DG+SGCK+ VF EE+ LF +FI+ +C DPD+L+G D
Sbjct: 1067 DDSFVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWD 1126
Query: 1092 IQGGSLGFLAE 1124
IQGGS+GFLAE
Sbjct: 1127 IQGGSIGFLAE 1137