BLASTX nr result

ID: Bupleurum21_contig00030231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030231
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                127   9e-28
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   127   9e-28
gb|AAK55774.1|AC079038_8 Putative polyprotein [Oryza sativa]          122   2e-26
emb|CAH66336.1| OSIGBa0097I24.4 [Oryza sativa Indica Group]           120   1e-25
emb|CAD40289.2| OSJNBb0062H02.6 [Oryza sativa Japonica Group]         120   1e-25

>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  127 bits (319), Expect = 9e-28
 Identities = 68/134 (50%), Positives = 90/134 (67%)
 Frame = +1

Query: 1   LALGLLMAARKLRHYFQGRTIEVITDQPLKKVLHKPETSGRLVAWAVELGEHDISYKPRT 180
           ++L +++AARKLR YF   TI+V+++ PL+K L K +TSGRL+ WAVEL E ++ YKPRT
Sbjct: 112 MSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRT 171

Query: 181 AIKAQALADFVVECSFNTPTVETLEAEKNVPKPWTLFVDGSVAHNKFGGGMILTSPQGFE 360
           AIKAQALADF+VE S+        E E+     W L VDGS A    G G+I+TSP+G  
Sbjct: 172 AIKAQALADFIVEASY--------EEEEEPVGVWKLAVDGSAAQTGSGAGIIMTSPEGNV 223

Query: 361 VQMAMRITFKVTNN 402
            + A  I FK +NN
Sbjct: 224 FEYA--IKFKASNN 235


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  127 bits (319), Expect = 9e-28
 Identities = 68/134 (50%), Positives = 90/134 (67%)
 Frame = +1

Query: 1   LALGLLMAARKLRHYFQGRTIEVITDQPLKKVLHKPETSGRLVAWAVELGEHDISYKPRT 180
           ++L +++AARKLR YF   TI+V+++ PL+K L K +TSGRL+ WAVEL E ++ YKPRT
Sbjct: 112 MSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRT 171

Query: 181 AIKAQALADFVVECSFNTPTVETLEAEKNVPKPWTLFVDGSVAHNKFGGGMILTSPQGFE 360
           AIKAQALADF+VE S+        E E+     W L VDGS A    G G+I+TSP+G  
Sbjct: 172 AIKAQALADFIVEASY--------EEEEEPVGVWKLAVDGSAAQTGSGAGIIMTSPEGNV 223

Query: 361 VQMAMRITFKVTNN 402
            + A  I FK +NN
Sbjct: 224 FEYA--IKFKASNN 235


>gb|AAK55774.1|AC079038_8 Putative polyprotein [Oryza sativa]
          Length = 2027

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/135 (45%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
 Frame = +1

Query: 13   LLMAARKLRHYFQGRTIEVITDQPLKKVLHKPETSGRLVAWAVELGEHDISYKPRTAIKA 192
            +LMA+RKLRHYFQ   + V+T  PL ++LH  E +GR+V WA+EL E D+ ++PR AIK+
Sbjct: 1342 ILMASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLRFEPRHAIKS 1401

Query: 193  QALADFVVECSFNTPTVETLEAEKNVPKP-----WTLFVDGSVAHNKFGGGMILTSPQGF 357
            QALADFV E +    TV   EA  N  +P     W +  DGS++    G G++LTSP G 
Sbjct: 1402 QALADFVAEWTPAPETVSIPEASTNPSQPPHTAHWVMQFDGSLSLQGAGSGVVLTSPNGD 1461

Query: 358  EVQMAMRITFKVTNN 402
             ++  +R+ F+ TNN
Sbjct: 1462 VLRYLVRLDFRATNN 1476


>emb|CAH66336.1| OSIGBa0097I24.4 [Oryza sativa Indica Group]
          Length = 2027

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/138 (44%), Positives = 86/138 (62%), Gaps = 8/138 (5%)
 Frame = +1

Query: 13   LLMAARKLRHYFQGRTIEVITDQPLKKVLHKPETSGRLVAWAVELGEHDISYKPRTAIKA 192
            +LMA+RKLRHYFQ   + V+T  PL ++LH  E +GR+V WA+EL E D+ ++PR AIK+
Sbjct: 1342 ILMASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKS 1401

Query: 193  QALADFVVECSFNTPTVETLEAEKNVPKP--------WTLFVDGSVAHNKFGGGMILTSP 348
            QALADFV EC   TP  ET+   +    P        W +  DGS++    G G+ LTSP
Sbjct: 1402 QALADFVAEC---TPAPETVSIPEASTDPSQLPHTAHWVMQFDGSLSLQGAGAGVTLTSP 1458

Query: 349  QGFEVQMAMRITFKVTNN 402
             G  ++  +R+ F+ TNN
Sbjct: 1459 NGDVLRYLVRLDFRATNN 1476


>emb|CAD40289.2| OSJNBb0062H02.6 [Oryza sativa Japonica Group]
          Length = 2001

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/138 (44%), Positives = 86/138 (62%), Gaps = 8/138 (5%)
 Frame = +1

Query: 13   LLMAARKLRHYFQGRTIEVITDQPLKKVLHKPETSGRLVAWAVELGEHDISYKPRTAIKA 192
            +LMA+RKLRHYFQ   + V+T  PL ++LH  E +GR+V WA+EL E D+ ++PR AIK+
Sbjct: 1342 ILMASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKS 1401

Query: 193  QALADFVVECSFNTPTVETLEAEKNVPKP--------WTLFVDGSVAHNKFGGGMILTSP 348
            QALADFV EC   TP  ET+   +    P        W +  DGS++    G G+ LTSP
Sbjct: 1402 QALADFVAEC---TPAPETVSIPEASTDPSQLPHTAHWVMQFDGSLSLQGAGAGVTLTSP 1458

Query: 349  QGFEVQMAMRITFKVTNN 402
             G  ++  +R+ F+ TNN
Sbjct: 1459 NGDVLRYLVRLDFRATNN 1476


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