BLASTX nr result

ID: Bupleurum21_contig00030198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030198
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511158.1| conserved hypothetical protein [Ricinus comm...    98   1e-18
ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    89   5e-16
ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    87   2e-15
ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g6352...    87   2e-15
emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]    87   2e-15

>ref|XP_002511158.1| conserved hypothetical protein [Ricinus communis]
           gi|223550273|gb|EEF51760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
 Frame = -1

Query: 533 ANGEKKKIFGAIMFSCISRGKPLGEANVASSPFLENFPDVTLAGSFCSGEICRGDSSSYG 354
           ++G++K++FG ++FSC  RG+ +   NV SSP  ENFP V LAG +C+GEI RG SSS  
Sbjct: 443 SSGKEKEVFGGLIFSCYLRGE-IFHPNVDSSPIHENFPGVALAGMYCNGEIGRGSSSSIS 501

Query: 353 QL-SEQGSHRCCLHYYSSVYLVMSYTP 276
           Q   E+ S RCCLHY+S+VYLV+SY P
Sbjct: 502 QEDDEENSARCCLHYHSAVYLVLSYVP 528


>ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
          Length = 538

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -1

Query: 512 IFGAIMFSCISRGKPL-GEANVASSPFLENFPDVTLAGSFCSGEICRGDSSSYGQLSEQG 336
           +FG I+F+C SRG+   G  NV SSPFLENFP V ++G FC GE+ R  ++  GQ     
Sbjct: 454 VFGGIIFACYSRGESFFGRQNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGAS 513

Query: 335 SHRCCLHYYSSVYLVMSYTP 276
              CCLH YS+VYL MSYTP
Sbjct: 514 PISCCLHVYSTVYLAMSYTP 533


>ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
          Length = 540

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -1

Query: 512 IFGAIMFSCISRGKPL-GEANVASSPFLENFPDVTLAGSFCSGEICRGDSSSYGQLSEQG 336
           +FG I+F+C  RG+   G  NV SSPFLENFP V ++G FC GE+ R  ++  GQ     
Sbjct: 456 VFGGIVFACYGRGESFFGRHNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGAS 515

Query: 335 SHRCCLHYYSSVYLVMSYTP 276
              CCLH YS+VYL MSYTP
Sbjct: 516 PISCCLHVYSTVYLAMSYTP 535


>ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Vitis vinifera]
           gi|297734433|emb|CBI15680.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -1

Query: 527 GEKKKIFGAIMFSCISRGKPL-GEANVASSPFLENFPDVTLAGSFCSGEICRGDSSSYGQ 351
           G+K ++ G I+FSC  RG    G+ANV SSPFLENFP   LAG  C GEI R   SS   
Sbjct: 436 GDKTEVCGGIIFSCYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEIGRVHLSSADH 495

Query: 350 L--SEQGSHRCCLHYYSSVYLVMSYTPSLL 267
               E+ S R  LHYYS+VYLV+S+TPS L
Sbjct: 496 QGGQEESSPRSYLHYYSTVYLVISHTPSSL 525


>emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]
          Length = 527

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -1

Query: 527 GEKKKIFGAIMFSCISRGKPL-GEANVASSPFLENFPDVTLAGSFCSGEICRGDSSSYGQ 351
           G+K ++ G I+FSC  RG    G+ANV SSPFLENFP   LAG  C GEI R   SS   
Sbjct: 436 GDKTEVCGGIIFSCYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEIGRVHLSSADH 495

Query: 350 L--SEQGSHRCCLHYYSSVYLVMSYTPSLL 267
               E+ S R  LHYYS+VYLV+S+TPS L
Sbjct: 496 QGGQEESSPRSYLHYYSTVYLVISHTPSSL 525


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