BLASTX nr result

ID: Bupleurum21_contig00030187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030187
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatul...   145   3e-33
ref|XP_003555849.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   140   8e-32
ref|XP_004163416.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-re...   140   1e-31
ref|XP_004144867.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   140   1e-31
ref|XP_002312937.1| f-box family protein [Populus trichocarpa] g...   137   7e-31

>ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|358345302|ref|XP_003636720.1| F-box/LRR-repeat
           protein [Medicago truncatula]
           gi|355481741|gb|AES62944.1| F-box/LRR-repeat protein
           [Medicago truncatula] gi|355502655|gb|AES83858.1|
           F-box/LRR-repeat protein [Medicago truncatula]
          Length = 643

 Score =  145 bits (367), Expect = 3e-33
 Identities = 83/157 (52%), Positives = 97/157 (61%)
 Frame = +2

Query: 50  RLDLLPVAILGTIMTKLDVPSICSVASTCKFFRSSTFHILTFLPNFSLLDVAPSIGXXXX 229
           RLD LP A+L TIMTKLDV SICS+A+T   FRS   HIL+FLPNF L+DVAPS G    
Sbjct: 8   RLDQLPHALLATIMTKLDVASICSLATTASTFRSCAKHILSFLPNFHLIDVAPS-GNLLT 66

Query: 230 XXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXNCADFSGSLLSQLGHRCKHLRS 409
                       K                         NC+DFSG LLS++G +CK LRS
Sbjct: 67  PLLPRNPYLKSLKVDCDRLDDSSISLLVKPSLHELSLYNCSDFSGKLLSEIGTQCKDLRS 126

Query: 410 LYLSSVADKRWRSICVSDLEQLLSGCTQLETLILMFD 520
           LYL SVA+KR RSI +SDLE+LL+GC+QLE LILMFD
Sbjct: 127 LYLGSVAEKRGRSIHISDLEELLTGCSQLEVLILMFD 163


>ref|XP_003555849.1| PREDICTED: F-box/LRR-repeat protein 10-like [Glycine max]
          Length = 637

 Score =  140 bits (354), Expect = 8e-32
 Identities = 78/156 (50%), Positives = 95/156 (60%)
 Frame = +2

Query: 53  LDLLPVAILGTIMTKLDVPSICSVASTCKFFRSSTFHILTFLPNFSLLDVAPSIGXXXXX 232
           LD LP A++ TIM+KLD+ SICS+AST   FRS   HIL+FLP F LLD+APS G     
Sbjct: 9   LDQLPSALVATIMSKLDIASICSLASTSSTFRSCARHILSFLPTFHLLDIAPS-GELLRP 67

Query: 233 XXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXNCADFSGSLLSQLGHRCKHLRSL 412
                      K                         NCADFSG LLS++G+RC HLRSL
Sbjct: 68  LLPPNPYLTNLKLDCAGLDDSAIGFLLKPSLHDLSLHNCADFSGRLLSEIGNRCNHLRSL 127

Query: 413 YLSSVADKRWRSICVSDLEQLLSGCTQLETLILMFD 520
           YL SVA+KR R+I +SDL++LL+GC+ LE LILMFD
Sbjct: 128 YLGSVAEKRGRAIHISDLQELLTGCSHLEALILMFD 163


>ref|XP_004163416.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 10-like
           [Cucumis sativus]
          Length = 637

 Score =  140 bits (352), Expect = 1e-31
 Identities = 78/156 (50%), Positives = 94/156 (60%)
 Frame = +2

Query: 53  LDLLPVAILGTIMTKLDVPSICSVASTCKFFRSSTFHILTFLPNFSLLDVAPSIGXXXXX 232
           LDLLP A+L TIMT LD+PSICS+ASTC+ F S    IL FLP F LL+++P++      
Sbjct: 11  LDLLPSAVLATIMTNLDLPSICSLASTCRTFHSCASQILNFLPTFHLLEISPTV-EFLRP 69

Query: 233 XXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXNCADFSGSLLSQLGHRCKHLRSL 412
                      K                         NCADFSG LLS++G  CK LRSL
Sbjct: 70  LLPPNPFLRSLKVDCGQLDDSAIRLLLKPSLHELCLHNCADFSGKLLSEIGGCCKDLRSL 129

Query: 413 YLSSVADKRWRSICVSDLEQLLSGCTQLETLILMFD 520
           YLSSVA+KR R+I ++DLE+LLSGCTQLE L LMFD
Sbjct: 130 YLSSVAEKRGRAIHIADLEELLSGCTQLEALTLMFD 165


>ref|XP_004144867.1| PREDICTED: F-box/LRR-repeat protein 10-like [Cucumis sativus]
          Length = 637

 Score =  140 bits (352), Expect = 1e-31
 Identities = 78/156 (50%), Positives = 94/156 (60%)
 Frame = +2

Query: 53  LDLLPVAILGTIMTKLDVPSICSVASTCKFFRSSTFHILTFLPNFSLLDVAPSIGXXXXX 232
           LDLLP A+L TIMT LD+PSICS+ASTC+ F S    IL FLP F LL+++P++      
Sbjct: 11  LDLLPSAVLATIMTNLDLPSICSLASTCRTFHSCASQILNFLPTFHLLEISPTV-EFLRP 69

Query: 233 XXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXNCADFSGSLLSQLGHRCKHLRSL 412
                      K                         NCADFSG LLS++G  CK LRSL
Sbjct: 70  LLPPNPFLRSLKVDCGQLDDSAIRLLLKPSLHELCLHNCADFSGKLLSEIGGCCKDLRSL 129

Query: 413 YLSSVADKRWRSICVSDLEQLLSGCTQLETLILMFD 520
           YLSSVA+KR R+I ++DLE+LLSGCTQLE L LMFD
Sbjct: 130 YLSSVAEKRGRAIHIADLEELLSGCTQLEALTLMFD 165


>ref|XP_002312937.1| f-box family protein [Populus trichocarpa]
           gi|222849345|gb|EEE86892.1| f-box family protein
           [Populus trichocarpa]
          Length = 644

 Score =  137 bits (346), Expect = 7e-31
 Identities = 77/156 (49%), Positives = 93/156 (59%)
 Frame = +2

Query: 53  LDLLPVAILGTIMTKLDVPSICSVASTCKFFRSSTFHILTFLPNFSLLDVAPSIGXXXXX 232
           LD LP  +L TI++KLDV SICSV+STCK F +   HILTF+P+F LLD+APSI      
Sbjct: 12  LDQLPATVLETIVSKLDVASICSVSSTCKTFNACASHILTFIPSFDLLDIAPSIDLLRPL 71

Query: 233 XXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXNCADFSGSLLSQLGHRCKHLRSL 412
                      K                         NCADFSG LLS++G +C  LR L
Sbjct: 72  LPPNPYLKSL-KLDCGRLDDSAINVVVRDSLHELYLHNCADFSGKLLSEIGGKCADLRYL 130

Query: 413 YLSSVADKRWRSICVSDLEQLLSGCTQLETLILMFD 520
           YL SVA+KR R+I +SDLE+LL GCT+LE LILMFD
Sbjct: 131 YLGSVAEKRGRAIHISDLEELLRGCTRLEALILMFD 166


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