BLASTX nr result

ID: Bupleurum21_contig00030179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030179
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]   105   5e-21
ref|NP_565910.1| protein rotundifolia like 8 [Arabidopsis thalia...   103   1e-20
ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263...   103   2e-20
gb|AFK33985.1| unknown [Lotus japonicus]                               99   3e-19
ref|XP_002531574.1| conserved hypothetical protein [Ricinus comm...    97   1e-18

>emb|CAN67911.1| hypothetical protein VITISV_024942 [Vitis vinifera]
          Length = 82

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/88 (63%), Positives = 67/88 (76%)
 Frame = +1

Query: 118 TTTPMATASELFLNEKWKLSRKEGSRSSAALIKKINCTSSKSRPSNENRRCGFTRKCASL 297
           T T  A A + +L+EKWKLS+KEGSRS ++       TS   R S++ RRC FTRKCASL
Sbjct: 4   TATAAAAAPQFYLDEKWKLSKKEGSRSRSS-------TSPLMRNSSQ-RRCSFTRKCASL 55

Query: 298 VKEQRARFYIMRRCVTMLICWRDNFSDS 381
           VKEQRARFYI+RRCVTMLICWR+ +SDS
Sbjct: 56  VKEQRARFYIVRRCVTMLICWRE-YSDS 82


>ref|NP_565910.1| protein rotundifolia like 8 [Arabidopsis thaliana]
           gi|20197045|gb|AAM14893.1| Expressed protein
           [Arabidopsis thaliana] gi|21555300|gb|AAM63828.1|
           unknown [Arabidopsis thaliana]
           gi|26450322|dbj|BAC42277.1| unknown protein [Arabidopsis
           thaliana] gi|28827724|gb|AAO50706.1| unknown protein
           [Arabidopsis thaliana] gi|42822055|tpg|DAA02282.1|
           TPA_exp: DVL11 [Arabidopsis thaliana]
           gi|330254615|gb|AEC09709.1| protein rotundifolia like 8
           [Arabidopsis thaliana]
          Length = 87

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/90 (55%), Positives = 65/90 (72%)
 Frame = +1

Query: 112 LGTTTPMATASELFLNEKWKLSRKEGSRSSAALIKKINCTSSKSRPSNENRRCGFTRKCA 291
           + +++ +  +  + L+EKWKLS+K+G    A+ I + + TSS S    +  RC FTRKCA
Sbjct: 1   MASSSSLTRSGSVHLDEKWKLSKKDGG---ASRITRSSSTSSSSFNGKKQGRCAFTRKCA 57

Query: 292 SLVKEQRARFYIMRRCVTMLICWRDNFSDS 381
            LVKEQRARFYIMRRCV MLICWRDN+SDS
Sbjct: 58  RLVKEQRARFYIMRRCVIMLICWRDNYSDS 87


>ref|XP_002283227.1| PREDICTED: uncharacterized protein LOC100263265 [Vitis vinifera]
          Length = 83

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/87 (63%), Positives = 66/87 (75%)
 Frame = +1

Query: 121 TTPMATASELFLNEKWKLSRKEGSRSSAALIKKINCTSSKSRPSNENRRCGFTRKCASLV 300
           T   A A + +L+EKWKLS+KEGSRS ++       TS   R S++ RRC FTRKCASLV
Sbjct: 6   TAAAAAAPQFYLDEKWKLSKKEGSRSRSS-------TSPLMRNSSQ-RRCSFTRKCASLV 57

Query: 301 KEQRARFYIMRRCVTMLICWRDNFSDS 381
           KEQRARFYI+RRCVTMLICWR+ +SDS
Sbjct: 58  KEQRARFYIVRRCVTMLICWRE-YSDS 83


>gb|AFK33985.1| unknown [Lotus japonicus]
          Length = 86

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/90 (55%), Positives = 63/90 (70%)
 Frame = +1

Query: 112 LGTTTPMATASELFLNEKWKLSRKEGSRSSAALIKKINCTSSKSRPSNENRRCGFTRKCA 291
           + +T   A    L+ +EKWKLS+KEGS + +   +  + T+   + S E R+C F RKCA
Sbjct: 1   MASTEGSAAPPPLYFDEKWKLSKKEGSFTRS---RSSSSTNFMKKSSQEQRKCAFARKCA 57

Query: 292 SLVKEQRARFYIMRRCVTMLICWRDNFSDS 381
            LVKEQRARFYIMRRCVTMLICWRD +SDS
Sbjct: 58  RLVKEQRARFYIMRRCVTMLICWRD-YSDS 86


>ref|XP_002531574.1| conserved hypothetical protein [Ricinus communis]
           gi|223528804|gb|EEF30810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = +1

Query: 145 ELFLNEKWKLSRKEGSRSSAALIKKINCTSSKSRPSNENRRCGFTRKCASLVKEQRARFY 324
           + + +EKWKLS+KEGS  S   ++       K+  S+  RRC FTRKCA LVKEQRARFY
Sbjct: 14  QFYFDEKWKLSKKEGSSRS---VRSSTSPLMKNSSSSSQRRCSFTRKCARLVKEQRARFY 70

Query: 325 IMRRCVTMLICWRDNFSDS 381
           I+RRCVTMLICWRD +SDS
Sbjct: 71  IVRRCVTMLICWRD-YSDS 88


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