BLASTX nr result

ID: Bupleurum21_contig00030130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030130
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17520.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_002267514.1| PREDICTED: vam6/Vps39-like protein [Vitis vi...   185   4e-45
ref|XP_004165852.1| PREDICTED: LOW QUALITY PROTEIN: vam6/Vps39-l...   182   2e-44
ref|XP_004149149.1| PREDICTED: vam6/Vps39-like protein-like [Cuc...   182   3e-44
ref|XP_002327802.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43

>emb|CBI17520.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/123 (74%), Positives = 108/123 (87%)
 Frame = -3

Query: 369 MHREALQFLLELVEVSKSDNQKAEIHQTFKPEMIIEYLKPLCGSDPMLVLEFSMPVLKSC 190
           MH +AL+ L +LVE SKSD  +AE+ Q FKPEMIIEYLKPLC ++PMLVLEFSM VL+SC
Sbjct: 481 MHHDALKLLHQLVEDSKSDQPQAELSQKFKPEMIIEYLKPLCATEPMLVLEFSMLVLESC 540

Query: 189 PAQTIELFLSGNISADLVNSYLKQHAPNLQATYLEQMLALSENGISAHLQNEMVQIYFSE 10
           P+QTI+LFLSGNI ADLVNSYLKQHAPN+QA YLE MLA++E+GIS +LQNEMVQIY SE
Sbjct: 541 PSQTIDLFLSGNIPADLVNSYLKQHAPNMQAMYLELMLAMNEHGISGNLQNEMVQIYLSE 600

Query: 9   VLD 1
           VL+
Sbjct: 601 VLE 603


>ref|XP_002267514.1| PREDICTED: vam6/Vps39-like protein [Vitis vinifera]
          Length = 1006

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/123 (74%), Positives = 108/123 (87%)
 Frame = -3

Query: 369 MHREALQFLLELVEVSKSDNQKAEIHQTFKPEMIIEYLKPLCGSDPMLVLEFSMPVLKSC 190
           MH +AL+ L +LVE SKSD  +AE+ Q FKPEMIIEYLKPLC ++PMLVLEFSM VL+SC
Sbjct: 563 MHHDALKLLHQLVEDSKSDQPQAELSQKFKPEMIIEYLKPLCATEPMLVLEFSMLVLESC 622

Query: 189 PAQTIELFLSGNISADLVNSYLKQHAPNLQATYLEQMLALSENGISAHLQNEMVQIYFSE 10
           P+QTI+LFLSGNI ADLVNSYLKQHAPN+QA YLE MLA++E+GIS +LQNEMVQIY SE
Sbjct: 623 PSQTIDLFLSGNIPADLVNSYLKQHAPNMQAMYLELMLAMNEHGISGNLQNEMVQIYLSE 682

Query: 9   VLD 1
           VL+
Sbjct: 683 VLE 685


>ref|XP_004165852.1| PREDICTED: LOW QUALITY PROTEIN: vam6/Vps39-like protein-like
           [Cucumis sativus]
          Length = 996

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/124 (74%), Positives = 109/124 (87%)
 Frame = -3

Query: 372 TMHREALQFLLELVEVSKSDNQKAEIHQTFKPEMIIEYLKPLCGSDPMLVLEFSMPVLKS 193
           +MHREAL+ L +LVE SK ++ + E+ Q FKPEMII+YLKPLCG+DPMLVLEFSM VL+S
Sbjct: 552 SMHREALKLLHQLVEESKVNDSQTEL-QKFKPEMIIDYLKPLCGTDPMLVLEFSMTVLES 610

Query: 192 CPAQTIELFLSGNISADLVNSYLKQHAPNLQATYLEQMLALSENGISAHLQNEMVQIYFS 13
           CP QTI+LFLSGNI ADLVNSYLKQHAPNLQATYLE MLA++E+ IS +LQNEM+QIY S
Sbjct: 611 CPTQTIDLFLSGNIPADLVNSYLKQHAPNLQATYLELMLAMNESSISGNLQNEMLQIYLS 670

Query: 12  EVLD 1
           EVL+
Sbjct: 671 EVLE 674


>ref|XP_004149149.1| PREDICTED: vam6/Vps39-like protein-like [Cucumis sativus]
          Length = 996

 Score =  182 bits (461), Expect = 3e-44
 Identities = 92/124 (74%), Positives = 108/124 (87%)
 Frame = -3

Query: 372 TMHREALQFLLELVEVSKSDNQKAEIHQTFKPEMIIEYLKPLCGSDPMLVLEFSMPVLKS 193
           +MHREAL+ L +LVE SK +  + E+ Q FKPEMII+YLKPLCG+DPMLVLEFSM VL+S
Sbjct: 552 SMHREALKLLHQLVEESKVNESQTEL-QKFKPEMIIDYLKPLCGTDPMLVLEFSMTVLES 610

Query: 192 CPAQTIELFLSGNISADLVNSYLKQHAPNLQATYLEQMLALSENGISAHLQNEMVQIYFS 13
           CP QTI+LFLSGNI ADLVNSYLKQHAPNLQATYLE MLA++E+ IS +LQNEM+QIY S
Sbjct: 611 CPTQTIDLFLSGNIPADLVNSYLKQHAPNLQATYLELMLAMNESSISGNLQNEMLQIYLS 670

Query: 12  EVLD 1
           EVL+
Sbjct: 671 EVLE 674


>ref|XP_002327802.1| predicted protein [Populus trichocarpa] gi|222836887|gb|EEE75280.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/123 (73%), Positives = 103/123 (83%)
 Frame = -3

Query: 369 MHREALQFLLELVEVSKSDNQKAEIHQTFKPEMIIEYLKPLCGSDPMLVLEFSMPVLKSC 190
           MHREAL+ L +LVE SKS+  K E++  FKPE I+EYLKPLC +DPMLVLEFSM VL+SC
Sbjct: 565 MHREALKLLHQLVEESKSNQSKPELNPKFKPESIVEYLKPLCWTDPMLVLEFSMLVLESC 624

Query: 189 PAQTIELFLSGNISADLVNSYLKQHAPNLQATYLEQMLALSENGISAHLQNEMVQIYFSE 10
           P QTIEL LSGNI ADLVNSYLKQHAP++Q  YLE ML ++ENGIS +LQNEMVQIY SE
Sbjct: 625 PTQTIELLLSGNIPADLVNSYLKQHAPSMQGRYLELMLVMNENGISGNLQNEMVQIYLSE 684

Query: 9   VLD 1
           VLD
Sbjct: 685 VLD 687


Top