BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030123
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   315   3e-84
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   261   8e-68
ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228...   220   1e-55
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   215   5e-54
ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, parti...   213   1e-53

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  315 bits (807), Expect = 3e-84
 Identities = 152/195 (77%), Positives = 171/195 (87%), Gaps = 4/195 (2%)
 Frame = -2

Query: 575  LDGMTITLKGNPSLARSKISLKAMIRTLRKEGGGIWLELNQVESGD----EQLNAGMNIP 408
            L G+  TL G+P+LARSK+SLKAM+RTLRKEGGG+WLE NQVE+G             IP
Sbjct: 594  LGGVPYTLTGDPTLARSKVSLKAMLRTLRKEGGGLWLECNQVEAGGAGSIRDSKVEQEIP 653

Query: 407  EFLEETLQQYKSVFEKPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIRE 228
             FL+E +++++ VFE PVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLI+E
Sbjct: 654  PFLQELMRRFEGVFETPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKE 713

Query: 227  MLEAGIIKPSTSPFSSPVLLVKKKDGSWRFCVDYRALNKETIPGKYPIPVIDELLDELHG 48
            ML AGII+PSTSPFSSPV+LVKKKDGSWRFCVDYRALNKET+P KYPIPVIDELLDELHG
Sbjct: 714  MLAAGIIQPSTSPFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDELLDELHG 773

Query: 47   ATIFSKLDLKAGYHQ 3
            AT+FSKLDL+AGYHQ
Sbjct: 774  ATVFSKLDLRAGYHQ 788


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  261 bits (666), Expect = 8e-68
 Identities = 126/187 (67%), Positives = 150/187 (80%)
 Frame = -2

Query: 563  TITLKGNPSLARSKISLKAMIRTLRKEGGGIWLELNQVESGDEQLNAGMNIPEFLEETLQ 384
            T+TL+GNP+L+R+++SLKAM RTLRKEGGG  ++LNQ+ S +        +P  L+  L 
Sbjct: 534  TVTLRGNPALSRTEVSLKAMYRTLRKEGGGFLVDLNQMASHEGLPRELPEVPSCLQPLLS 593

Query: 383  QYKSVFEKPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIREMLEAGIIK 204
             Y+ VF  P+GLPP RGH HAI L+ G+NPV VRPYRYPQ QKDEIE+LI +ML AGII+
Sbjct: 594  SYQQVFNMPLGLPPDRGHVHAINLQHGTNPVSVRPYRYPQSQKDEIEQLIHDMLAAGIIQ 653

Query: 203  PSTSPFSSPVLLVKKKDGSWRFCVDYRALNKETIPGKYPIPVIDELLDELHGATIFSKLD 24
             S S FSSPVLLVKKKDGSWRFCVDYRALN  T+P KYPIP+IDELLDELHGA +FSKLD
Sbjct: 654  QSHSAFSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPIIDELLDELHGACVFSKLD 713

Query: 23   LKAGYHQ 3
            LK+GYHQ
Sbjct: 714  LKSGYHQ 720


>ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
          Length = 703

 Score =  220 bits (561), Expect = 1e-55
 Identities = 115/191 (60%), Positives = 141/191 (73%), Gaps = 6/191 (3%)
 Frame = -2

Query: 560 ITLKGNPSLARSKISLKAMIRTLRKEGGGIWLELNQVESG------DEQLNAGMNIPEFL 399
           + L+GN SL +S++SLK+MI   +KE  G+ +EL+ VE G      D   +   N+   +
Sbjct: 432 VILQGNKSLVKSQVSLKSMI--FKKEDQGVLIELSTVEQGGAEESKDNLADYLSNLKPEV 489

Query: 398 EETLQQYKSVFEKPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIREMLE 219
           +  L  + SVFE    LPP R H+HAI L+ G+  V VRPYRYPQFQKDEIE+L+++ML 
Sbjct: 490 QRILLSFGSVFESINQLPPPRDHDHAIELESGARAVNVRPYRYPQFQKDEIEKLVKKMLL 549

Query: 218 AGIIKPSTSPFSSPVLLVKKKDGSWRFCVDYRALNKETIPGKYPIPVIDELLDELHGATI 39
           A II+PS S FSSPVLLVKKKDGSWRFCVDYRALN  TIP KYPIPV+DELLDEL GATI
Sbjct: 550 AKIIQPSKSAFSSPVLLVKKKDGSWRFCVDYRALNLATIPDKYPIPVVDELLDELFGATI 609

Query: 38  FSKLDLKAGYH 6
           FSK+DLK+GYH
Sbjct: 610 FSKIDLKSGYH 620


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  215 bits (547), Expect = 5e-54
 Identities = 109/186 (58%), Positives = 136/186 (73%)
 Frame = -2

Query: 560  ITLKGNPSLARSKISLKAMIRTLRKEGGGIWLELNQVESGDEQLNAGMNIPEFLEETLQQ 381
            ++L G+P L R +IS+++M R ++  G    LEL  +    +Q       P  ++  L Q
Sbjct: 628  VSLYGDPDLCRGQISMRSMERVIKYTGTAYLLELASLFESKKQEEQTALQPA-IQRLLDQ 686

Query: 380  YKSVFEKPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIREMLEAGIIKP 201
            Y+ VF+ P  LPP R  EHAI L+EGS+PV +RPYRY   QK+EIE+L+REML A II+P
Sbjct: 687  YQGVFQTPQLLPPVRNREHAITLQEGSSPVNIRPYRYSFAQKNEIEKLVREMLNAQIIRP 746

Query: 200  STSPFSSPVLLVKKKDGSWRFCVDYRALNKETIPGKYPIPVIDELLDELHGATIFSKLDL 21
            S SP+SSPVLLVKKKDG WRFCVDYRALN+ TIP KYPIPVI+ELLDEL GAT+FSKLDL
Sbjct: 747  SVSPYSSPVLLVKKKDGGWRFCVDYRALNEATIPDKYPIPVIEELLDELKGATVFSKLDL 806

Query: 20   KAGYHQ 3
            K+GY Q
Sbjct: 807  KSGYFQ 812


>ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 1049

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/191 (56%), Positives = 141/191 (73%), Gaps = 7/191 (3%)
 Frame = -2

Query: 554  LKGNPSLARSKISLKAMIRTLRKEGGGIWLELNQVESGDE-QLNAGMNIPEFLEET---- 390
            LKG+PSL R++ SLK + +T  ++  G  LE+   E+ ++ +L+    +    EE+    
Sbjct: 486  LKGDPSLIRAECSLKTIEKTWEEDDQGFLLEMQNYEAEEDGELDEVQRVKGDEEESPMIQ 545

Query: 389  --LQQYKSVFEKPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIREMLEA 216
              LQQY  +FE+P GLPP+R  +H I+L  G  P+ VRPY+Y   QK+EIE+L+ EML+A
Sbjct: 546  VLLQQYTDLFEEPKGLPPKRECDHRILLVTGQKPINVRPYKYGYVQKEEIEKLVVEMLQA 605

Query: 215  GIIKPSTSPFSSPVLLVKKKDGSWRFCVDYRALNKETIPGKYPIPVIDELLDELHGATIF 36
            G+I+PS SP+SSPVLLVKKKDG WRFCVDYR LN+ TI  K+PIPVI+ELLDELHGAT+F
Sbjct: 606  GVIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHGATVF 665

Query: 35   SKLDLKAGYHQ 3
            SKLDLK+GYHQ
Sbjct: 666  SKLDLKSGYHQ 676