BLASTX nr result

ID: Bupleurum21_contig00030103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030103
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324060.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...   165   4e-39
emb|CAN80115.1| hypothetical protein VITISV_032527 [Vitis vinifera]   165   4e-39
ref|NP_001234191.1| FtsH protease [Solanum lycopersicum] gi|6695...   163   2e-38
ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinu...   161   6e-38

>ref|XP_002324060.1| predicted protein [Populus trichocarpa] gi|222867062|gb|EEF04193.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  168 bits (426), Expect = 5e-40
 Identities = 95/148 (64%), Positives = 105/148 (70%)
 Frame = -1

Query: 569 AAGDLQQITRIAKQVF*WKFAPYIYSLYS*IVEEISNFSKRLDHSTLFD*QMVTMYGMSE 390
           AAGDLQQIT+IAKQ                                     MVTM+GMSE
Sbjct: 551 AAGDLQQITQIAKQ-------------------------------------MVTMFGMSE 573

Query: 389 IGPWALTDYEAQRSDLVLRMLARNSMSEKLAEDIDTTVRTIIERAYTIARHHIRNNREAI 210
           +GPWALTD  AQ SD+VLRMLARNSMSEKLAEDID++VR IIERAY IA+ HIRNNREAI
Sbjct: 574 LGPWALTDPAAQSSDVVLRMLARNSMSEKLAEDIDSSVRNIIERAYEIAKEHIRNNREAI 633

Query: 209 DKLVEVLLDKETLNGDEFRAILSEFTDI 126
           DKLVEVLL+KETL+GDEFRA+LSEFTDI
Sbjct: 634 DKLVEVLLEKETLSGDEFRAMLSEFTDI 661


>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
           chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score =  165 bits (418), Expect = 4e-39
 Identities = 93/150 (62%), Positives = 103/150 (68%)
 Frame = -1

Query: 569 AAGDLQQITRIAKQVF*WKFAPYIYSLYS*IVEEISNFSKRLDHSTLFD*QMVTMYGMSE 390
           AAGDLQQ+T+IA+Q                                     MVTM+GMSE
Sbjct: 550 AAGDLQQVTQIARQ-------------------------------------MVTMFGMSE 572

Query: 389 IGPWALTDYEAQRSDLVLRMLARNSMSEKLAEDIDTTVRTIIERAYTIARHHIRNNREAI 210
           IGPWALTD   Q  D+VLRMLARNSMSEKLAEDIDT+VR IIE AY +A+ HIRNNREAI
Sbjct: 573 IGPWALTDPAVQSGDVVLRMLARNSMSEKLAEDIDTSVRNIIESAYEVAKTHIRNNREAI 632

Query: 209 DKLVEVLLDKETLNGDEFRAILSEFTDITS 120
           DKLVEVLL+KETL GDEFRAILSEFTDI+S
Sbjct: 633 DKLVEVLLEKETLTGDEFRAILSEFTDISS 662


>emb|CAN80115.1| hypothetical protein VITISV_032527 [Vitis vinifera]
          Length = 676

 Score =  165 bits (418), Expect = 4e-39
 Identities = 93/150 (62%), Positives = 103/150 (68%)
 Frame = -1

Query: 569 AAGDLQQITRIAKQVF*WKFAPYIYSLYS*IVEEISNFSKRLDHSTLFD*QMVTMYGMSE 390
           AAGDLQQ+T+IA+Q                                     MVTM+GMSE
Sbjct: 550 AAGDLQQVTQIARQ-------------------------------------MVTMFGMSE 572

Query: 389 IGPWALTDYEAQRSDLVLRMLARNSMSEKLAEDIDTTVRTIIERAYTIARHHIRNNREAI 210
           IGPWALTD   Q  D+VLRMLARNSMSEKLAEDIDT+VR IIE AY +A+ HIRNNREAI
Sbjct: 573 IGPWALTDPAVQSGDVVLRMLARNSMSEKLAEDIDTSVRNIIESAYEVAKTHIRNNREAI 632

Query: 209 DKLVEVLLDKETLNGDEFRAILSEFTDITS 120
           DKLVEVLL+KETL GDEFRAILSEFTDI+S
Sbjct: 633 DKLVEVLLEKETLTGDEFRAILSEFTDISS 662


>ref|NP_001234191.1| FtsH protease [Solanum lycopersicum] gi|66954652|dbj|BAD99306.1|
           FtsH protease [Solanum lycopersicum]
          Length = 672

 Score =  163 bits (413), Expect = 2e-38
 Identities = 93/148 (62%), Positives = 102/148 (68%)
 Frame = -1

Query: 569 AAGDLQQITRIAKQVF*WKFAPYIYSLYS*IVEEISNFSKRLDHSTLFD*QMVTMYGMSE 390
           AAGDLQQIT+IA+Q                                     MVTM+GMSE
Sbjct: 546 AAGDLQQITQIARQ-------------------------------------MVTMFGMSE 568

Query: 389 IGPWALTDYEAQRSDLVLRMLARNSMSEKLAEDIDTTVRTIIERAYTIARHHIRNNREAI 210
           IGPWALTD  AQ  D+VLRMLARN MSEKLAEDID +VR IIERAY IA++HIRNNREAI
Sbjct: 569 IGPWALTDPAAQSGDVVLRMLARNQMSEKLAEDIDESVRHIIERAYEIAKNHIRNNREAI 628

Query: 209 DKLVEVLLDKETLNGDEFRAILSEFTDI 126
           DKLV+VLL+KETL GDEFRAILSEFTDI
Sbjct: 629 DKLVDVLLEKETLTGDEFRAILSEFTDI 656


>ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
           gi|223528509|gb|EEF30537.1| Cell division protein ftsH,
           putative [Ricinus communis]
          Length = 1157

 Score =  161 bits (408), Expect = 6e-38
 Identities = 90/164 (54%), Positives = 108/164 (65%)
 Frame = -1

Query: 569 AAGDLQQITRIAKQVF*WKFAPYIYSLYS*IVEEISNFSKRLDHSTLFD*QMVTMYGMSE 390
           AAGDLQQ+T IAKQ                                     MVT++GMSE
Sbjct: 547 AAGDLQQVTEIAKQ-------------------------------------MVTIFGMSE 569

Query: 389 IGPWALTDYEAQRSDLVLRMLARNSMSEKLAEDIDTTVRTIIERAYTIARHHIRNNREAI 210
           IGPWALTD   Q +D+VLRMLARNSMSEKLA+DIDT++R IIERA+ IA+ H+RNNR+AI
Sbjct: 570 IGPWALTDPAVQSTDVVLRMLARNSMSEKLAQDIDTSIRDIIERAHEIAKEHVRNNRDAI 629

Query: 209 DKLVEVLLDKETLNGDEFRAILSEFTDITSYQAHGSLLLETNKV 78
           DKLV++LL+KETL GDEFRAILSEFTDI+  Q   +  L   K+
Sbjct: 630 DKLVDILLEKETLTGDEFRAILSEFTDISGAQVERTPCLSLLKL 673


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