BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030101
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...    67   1e-09
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = +3

Query: 45  MNHTKRILSSLKLANSLCSTRLIRTNSRYHQVIH---LSPSISQRFARNQTPNVIYVHQN 215
           MN  K IL S++  NS  ST+  R +S  +QV      SPS S +   +  P ++Y    
Sbjct: 1   MNRAKAILFSIRFTNSFRSTQFRRASSLCYQVTQSSRFSPSFSNQSYTSAFPYILY--GK 58

Query: 216 VFFSSRPESILELVLSEDWSKXXXXXXXXSNSEMTHGTVIYIL 344
           +FFSS+P SI+ELVL  DWS         S+S +TH TVIY+L
Sbjct: 59  LFFSSKPNSIVELVLENDWSDELESELEKSSSVLTHETVIYVL 101


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/100 (37%), Positives = 55/100 (55%)
 Frame = +3

Query: 45  MNHTKRILSSLKLANSLCSTRLIRTNSRYHQVIHLSPSISQRFARNQTPNVIYVHQNVFF 224
           MN  + IL SL+L+N L STR+  T     QV H  P    R   + T + + +H+ ++ 
Sbjct: 1   MNRARTILVSLRLSNFLLSTRISTTRPFLTQVTHFFPCFLSR-EHSYTSDYVNIHKKLYS 59

Query: 225 SSRPESILELVLSEDWSKXXXXXXXXSNSEMTHGTVIYIL 344
           SS+P S++EL+   DWS         S+  +TH TVIY+L
Sbjct: 60  SSKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVL 99


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/100 (40%), Positives = 54/100 (54%)
 Frame = +3

Query: 45  MNHTKRILSSLKLANSLCSTRLIRTNSRYHQVIHLSPSISQRFARNQTPNVIYVHQNVFF 224
           M     I +SL+LANS  STR     SRY QV   SPS S    ++   +    H  +FF
Sbjct: 1   MTRRNAIFTSLRLANSFFSTR-----SRYPQVTRFSPS-SYVSHQSLVSHFTINHPVLFF 54

Query: 225 SSRPESILELVLSEDWSKXXXXXXXXSNSEMTHGTVIYIL 344
           SS P+S+L+LV + DWS+         N  +TH TV+Y+L
Sbjct: 55  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVL 94


>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
 Frame = +3

Query: 45  MNHTKRILSSLKLANSLCSTRLIRTNSRY---HQVIHLSPSISQRFARNQ----TPNVIY 203
           MN  + I+ +L+   S  ++R+  T S     +QV H S         N      PN+  
Sbjct: 1   MNRLRAIVVNLRFLESPLASRVTATRSLLLTRNQVTHFSLCTPSPLLDNSHHFLLPNI-- 58

Query: 204 VHQNVFFSSRPESILELVLSEDWSKXXXXXXXXSNSEMTHGTVIYIL 344
            HQN++FSS+P SI+ELVL+ DWSK            MTH TV+Y+L
Sbjct: 59  -HQNLYFSSKPNSIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVL 104