BLASTX nr result

ID: Bupleurum21_contig00030097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030097
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      56   3e-06

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2    QWLEDSIKNNQRLKEDTYSIKLEGLGELDVGECENKLKPEED--IYDVEKHDLMHIPAKD 175
            QWLE  ++  +RL+E  YS+K EGL E + GEC++ +  E    +  VE  +L+  P K+
Sbjct: 891  QWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKE 950

Query: 176  EKHKKRISIAVDSSSLAPDKNYNLKRRGRP 265
             K  +  +     S LA  K    ++RGRP
Sbjct: 951  GKQGRGKAPPESISILASPKRDEKRKRGRP 980


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2    QWLEDSIKNNQRLKEDTYSIKLEGLGELDVGECENKLKPEED--IYDVEKHDLMHIPAKD 175
            QWLE  ++  +RL+E  YS+K EGL E + GEC++ +  E    +  VE  +L+  P K+
Sbjct: 890  QWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKE 949

Query: 176  EKHKKRISIAVDSSSLAPDKNYNLKRRGRP 265
             K  +  +     S LA  K    ++RGRP
Sbjct: 950  GKQGRGKAPPESISILASPKRDEKRKRGRP 979


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