BLASTX nr result

ID: Bupleurum21_contig00030092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030092
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN90152.1| S haplotype-specific F-box protein [Prunus salic...    60   1e-07
emb|CAN90143.1| S haplotype-specific F-box protein [Prunus ceras...    60   1e-07
gb|AAT69249.1| S-locus F-box protein 4 [Prunus armeniaca]              59   4e-07
gb|ADZ73656.1| S-haplotype-specific F-box protein [Prunus armeni...    59   5e-07
gb|ACJ23023.1| S-locus F-box protein 24 [Prunus armeniaca]             59   5e-07

>emb|CAN90152.1| S haplotype-specific F-box protein [Prunus salicina]
          Length = 331

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
 Frame = +1

Query: 4   CVQKSWFHLIKTPTFVNLHLDHN---HNHIVDAAAAPPKLLLFNSPADHKL-------LY 153
           C  KSW  LI + + V+ HL  N   H+H+           L   P D  +       L+
Sbjct: 16  CTCKSWSDLIGSSSLVSTHLHRNVTKHDHVYLLCLHHSNFELQADPDDPYVKQEFQWSLF 75

Query: 154 IRSDDEQCQEFYNLELPPVMHPELYANWHAVSSSLICISTI---FDTGTKTNTTDIFLWN 324
                EQC +  +  L    H  +Y +    S+ L+CIS     FDT        I++WN
Sbjct: 76  SNQTFEQCSKLSH-PLGSTEHYVIYGS----SNGLVCISDEILNFDT-------PIYIWN 123

Query: 325 PLIQTCKTLPVLDHSHI-FAHYWKALAFGYVPCIHDFQVVFIVNDNFKPPGIPPTFFICV 501
           P ++  +TLP+  + +I F+H   AL FG+ P ++D++ V ++  N  P  +       V
Sbjct: 124 PSVRKLRTLPISTNINIKFSHV--ALQFGFHPVVNDYKAVRMMRTNKNPLAVE------V 175

Query: 502 YSLNT 516
           YSL T
Sbjct: 176 YSLRT 180


>emb|CAN90143.1| S haplotype-specific F-box protein [Prunus cerasifera]
          Length = 331

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
 Frame = +1

Query: 4   CVQKSWFHLIKTPTFVNLHLDHN---HNHIVDAAAAPPKLLLFNSPADHKL-------LY 153
           C  KSW  LI + + V+ HL  N   H+H+           L   P D  +       L+
Sbjct: 16  CTCKSWSDLIGSSSLVSTHLHRNVTKHDHVYLLCLHHSNFELQADPDDPYVKQEFQWSLF 75

Query: 154 IRSDDEQCQEFYNLELPPVMHPELYANWHAVSSSLICISTI---FDTGTKTNTTDIFLWN 324
                EQC +  +  L    H  +Y +    S+ L+CIS     FDT        I++WN
Sbjct: 76  SNQTFEQCSKLSH-PLGSTEHYVIYGS----SNGLVCISDEILNFDT-------PIYIWN 123

Query: 325 PLIQTCKTLPVLDHSHI-FAHYWKALAFGYVPCIHDFQVVFIVNDNFKPPGIPPTFFICV 501
           P ++  +TLP+  + +I F+H   AL FG+ P ++D++ V ++  N  P  +       V
Sbjct: 124 PSVRKLRTLPISTNINIKFSHV--ALQFGFHPVVNDYKAVRMMRTNKNPLAVE------V 175

Query: 502 YSLNT 516
           YSL T
Sbjct: 176 YSLRT 180


>gb|AAT69249.1| S-locus F-box protein 4 [Prunus armeniaca]
          Length = 373

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
 Frame = +1

Query: 4   CVQKSWFHLIKTPTFVNLHLDHN---HNHIVDAAAAPPKLLLFNSPADHKL-------LY 153
           C  KSW  LI + +FV+ HL+ N   H H+       P       P D  L       L+
Sbjct: 28  CTCKSWSDLIGSSSFVSTHLNRNVNKHAHVYLLCLHHPNFECVVDPDDPYLEEEVQWSLF 87

Query: 154 IRSDDEQCQEFYNLELPPVMHPELYANWHAVSSSLICIS---TIFDTGTKTNTTDIFLWN 324
                E+C +  N  L    H  +Y +    S+ L+CIS     FD       + I +WN
Sbjct: 88  PNETFEECSKL-NHPLGSTEHYGIYGS----SNGLVCISDEILNFD-------SPIHIWN 135

Query: 325 PLIQTCKTLPVLDHSHIFAHYWKALAFGYVPCIHDFQVVFIVNDNFKPPGIPPTFFICVY 504
           P ++  +TLP+  +   F+H   AL FG+ P ++D++ V ++  N     I       VY
Sbjct: 136 PSVRKLRTLPISTNIIKFSHV--ALQFGFHPGVNDYKAVRMMRTNKNALAIE------VY 187

Query: 505 SLNT 516
           SL T
Sbjct: 188 SLRT 191


>gb|ADZ73656.1| S-haplotype-specific F-box protein [Prunus armeniaca]
          Length = 373

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
 Frame = +1

Query: 4   CVQKSWFHLIKTPTFVNLHLDHN---HNHIVDAAAAPPKLLLFNSPADHKL-------LY 153
           C  KSW  LI + +FV+ HL+ N   H H+       P       P D  L       L+
Sbjct: 28  CTCKSWSDLIGSSSFVSTHLNRNVNKHAHVYLLCLHHPNFECVVDPDDPYLEEEVQWSLF 87

Query: 154 IRSDDEQCQEFYNLELPPVMHPELYANWHAVSSSLICIS---TIFDTGTKTNTTDIFLWN 324
                E+C +  N  L    H  +Y +    S+ L+CIS     FD       + I +WN
Sbjct: 88  PNETFEECSKL-NHPLGSTEHYGIYGS----SNGLVCISDEILNFD-------SPIHIWN 135

Query: 325 PLIQTCKTLPVLDHSHIFAHYWKALAFGYVPCIHDFQVVFIVNDNFKPPGIPPTFFICVY 504
           P ++  +TLP+  +   F+H   AL FG+ P ++D++ V ++  N     +       VY
Sbjct: 136 PSVRKLRTLPISTNIIKFSHV--ALQFGFHPGVNDYKAVRMMRTNKNALAVE------VY 187

Query: 505 SLNT 516
           SL T
Sbjct: 188 SLRT 191


>gb|ACJ23023.1| S-locus F-box protein 24 [Prunus armeniaca]
          Length = 360

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
 Frame = +1

Query: 4   CVQKSWFHLIKTPTFVNLHLDHN---HNHIVDAAAAPPKLLLFNSPADHKL-------LY 153
           C  KSW  LI + +FV+ HL+ N   H H+       P       P D  L       L+
Sbjct: 28  CTCKSWSDLIGSSSFVSTHLNRNVNKHAHVYLLCLHHPNFECVVDPDDPYLEEEVQWSLF 87

Query: 154 IRSDDEQCQEFYNLELPPVMHPELYANWHAVSSSLICIS---TIFDTGTKTNTTDIFLWN 324
                E+C +  N  L    H  +Y +    S+ L+CIS     FD       + I +WN
Sbjct: 88  PNETFEECSKL-NHPLGSTEHYGIYGS----SNGLVCISDEILNFD-------SPIHIWN 135

Query: 325 PLIQTCKTLPVLDHSHIFAHYWKALAFGYVPCIHDFQVVFIVNDNFKPPGIPPTFFICVY 504
           P ++  +TLP+  +   F+H   AL FG+ P ++D++ V ++  N     +       VY
Sbjct: 136 PSVRKLRTLPISTNIIKFSHV--ALQFGFHPGVNDYKAVRMMRTNKNALAVE------VY 187

Query: 505 SLNT 516
           SL T
Sbjct: 188 SLRT 191


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