BLASTX nr result

ID: Bupleurum21_contig00030088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030088
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...   238   4e-61
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...   229   4e-58
ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycin...   218   8e-55
ref|XP_003544784.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...   213   3e-53
ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich...   211   8e-53

>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  238 bits (608), Expect = 4e-61
 Identities = 111/171 (64%), Positives = 142/171 (83%), Gaps = 1/171 (0%)
 Frame = -2

Query: 596 REFAEELVKEAHEYNGFNLIMVDLLSSSMFYISNRPKGEAVLFHEVKPGIHVLSNAKLDS 417
           +EFAE LVK+AH+YNGFNLI+ D+ S SM Y+SNRP+GE V+  EV PG+HVLSNAKLDS
Sbjct: 91  KEFAEGLVKDAHQYNGFNLILADISSKSMVYLSNRPEGEPVVIQEVSPGLHVLSNAKLDS 150

Query: 416 PWPKAQRLGLEFKNLVGKH-DGDIPMEELAEKLMKDKKKVDNESKLPHICSLDWEYNLSS 240
           PW K QRLGL  K+L+GK+ + +IP++E+ EKLM+DK K D +S+LP ICS+DWE+NLSS
Sbjct: 151 PWHKVQRLGLNLKDLLGKYGESEIPVKEVLEKLMRDKVKAD-KSRLPGICSIDWEFNLSS 209

Query: 239 IFVEVDTPLGCYGTRSTAGIKVKANGEVSFHEMYLENKIWKAHTIEYQIQR 87
           IFVE+DTPLGCYGTRSTA + + A GEVSF+E+YLE  +WK  T+ Y+IQ+
Sbjct: 210 IFVEIDTPLGCYGTRSTAALTIGAGGEVSFYEIYLEKNVWKESTVNYRIQK 260


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score =  229 bits (583), Expect = 4e-58
 Identities = 113/170 (66%), Positives = 134/170 (78%), Gaps = 2/170 (1%)
 Frame = -2

Query: 596 REFAEELVKEAHEYNGFNLIMVDLLSSSMFYISNRPKGEAVLFHEVKPGIHVLSNAKLDS 417
           +EFAE LVKEAH+YNGFNLI+ D+ S SM YISNRPKGE V+  EV PGIHVLSNAKLDS
Sbjct: 74  KEFAEMLVKEAHQYNGFNLILADISSKSMVYISNRPKGEPVVVQEVSPGIHVLSNAKLDS 133

Query: 416 PWPKAQRLGLEFKNLVGKHDG--DIPMEELAEKLMKDKKKVDNESKLPHICSLDWEYNLS 243
           PWPK QRL L FK  +  + G  +IP+E + EKLM+D  + + +S LP ICSLDWE+NLS
Sbjct: 134 PWPKVQRLKLNFKEQLDTYGGEDEIPVEGMLEKLMRDTVRAE-KSGLPGICSLDWEHNLS 192

Query: 242 SIFVEVDTPLGCYGTRSTAGIKVKANGEVSFHEMYLENKIWKAHTIEYQI 93
           SIFVEV TPLGCYGTRST  + V+ANGEVSF+E YLE+ IWK  T+ Y+I
Sbjct: 193 SIFVEVHTPLGCYGTRSTTALTVRANGEVSFYETYLEDNIWKEKTVNYRI 242


>ref|NP_001240971.1| uncharacterized protein LOC100820362 [Glycine max]
           gi|255635670|gb|ACU18184.1| unknown [Glycine max]
          Length = 273

 Score =  218 bits (554), Expect = 8e-55
 Identities = 104/179 (58%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
 Frame = -2

Query: 596 REFAEELVKEAHEYNGFNLIMVDLLSSSMFYISNRPKGEAVLFHEVKPGIHVLSNAKLDS 417
           +EFAE L  EAH YNGFNLI+ D++S+SM YISNRPKG+ +   EV PG+HVLSN KLDS
Sbjct: 95  KEFAESLKSEAHYYNGFNLIVADIVSNSMVYISNRPKGQPITIQEVPPGLHVLSNDKLDS 154

Query: 416 PWPKAQRLGLEFKNLVGKH-DGDIPMEELAEKLMKDKKKVDNESKLPHICSLDWEYNLSS 240
           PW KA RL   FK  V KH +G+IP++E+ +KLMKD  K D  S LP ICSLDWE+NLSS
Sbjct: 155 PWHKALRLEFSFKEHVAKHGEGEIPVKEVIQKLMKDTVKADKNS-LPRICSLDWEFNLSS 213

Query: 239 IFVEVDTPLGCYGTRSTAGIKVKANGEVSFHEMYLENKIWKAHTIEYQIQRNDHKIEQI 63
           IFVEV+TPLG YGTRS+A + V+++GE SF+E+YL++  WK H I+++I + ++  +++
Sbjct: 214 IFVEVETPLGLYGTRSSAALTVRSSGEASFYEVYLDDTKWKEHVIDFRIGKLNYVTDEV 272


>ref|XP_003544784.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Glycine
           max]
          Length = 270

 Score =  213 bits (541), Expect = 3e-53
 Identities = 105/171 (61%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
 Frame = -2

Query: 596 REFAEELVKEAHEYNGFNLIMVDLLSSSMFYISNRPKGEAVLFHEVKPGIHVLSNAKLDS 417
           +EFAE L  EAH YNGFNLI+ D+ S  M YISN PKG+ +   EV PG+HVLSNAKLDS
Sbjct: 95  KEFAESLKMEAHYYNGFNLIVADIPSKCMVYISNSPKGQPITIKEVSPGLHVLSNAKLDS 154

Query: 416 PWPKAQRLGLEFKNLVGKH-DGDIPMEELAEKLMKDKKKVDNESKLPHICSLDWEYNLSS 240
            W KAQRL + FK  + K+ +G+IP++E+  KLMKDK K DN S LPHICSLDWE+NLSS
Sbjct: 155 KWHKAQRLEVGFKEQLAKYGEGEIPVKEVVHKLMKDKTKADN-SHLPHICSLDWEFNLSS 213

Query: 239 IFVEVDTPLGCYGTRSTAGIKVKANGEVSFHEMYLENKIWKAHTIEYQIQR 87
           IFVEV+TPLG YGTRS+A + V ++ EVSF E YL+  +WK H I++ IQ+
Sbjct: 214 IFVEVETPLGLYGTRSSAALIVTSSEEVSFFEAYLDEGMWKEHLIDFHIQK 264


>ref|XP_003526588.1| PREDICTED: LOW QUALITY PROTEIN: ser/Thr-rich protein T10 in DGCR
           region-like [Glycine max]
          Length = 275

 Score =  211 bits (537), Expect = 8e-53
 Identities = 101/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
 Frame = -2

Query: 596 REFAEELVKEAHEYNGFNLIMVDLLSSSMFYISNRPKGEAVLFHEVKPGIHVLSNAKLDS 417
           +EFAE L  EAH YNGFN+++ D++S SM YISNRPKG+ +   EV PG+HVLSN KLDS
Sbjct: 95  KEFAESLKLEAHYYNGFNIVVADIVSKSMVYISNRPKGQPITIKEVPPGLHVLSNDKLDS 154

Query: 416 PWPKAQRLGLEFKNLVGKH-DGDIPMEELAEKLMKDKKKVDNESKLPHICSLDWEYNLSS 240
           PW KA RL   FK  V K+ +G+IP++E+ +KLMKDK K D +S LP ICS DWE+NLSS
Sbjct: 155 PWHKALRLEFSFKEHVAKYGEGEIPVKEVIQKLMKDKVKAD-KSSLPRICSPDWEFNLSS 213

Query: 239 IFVEVDTPLGCYGTRSTAGIKVKANGEVSFHEMYLENKIWKAHTIEYQIQRNDHK 75
           IFVEV+TPLG YGTRS+A + V++ GE +F+E+YL++  WK H I++ I + ++K
Sbjct: 214 IFVEVETPLGLYGTRSSAALTVRSRGEANFYEVYLDDTKWKEHAIDFHIGKLNYK 268


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