BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030087
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   140   1e-31
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    139   3e-31
emb|CAN78818.1| hypothetical protein VITISV_015505 [Vitis vinifera]   122   2e-26
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]   120   2e-25
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]   118   6e-25

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/107 (57%), Positives = 83/107 (77%)
 Frame = +1

Query: 1   VRHVPDLRLNLMPGMVLDKEGFINTFGNGKWELTTGSKVVARGSTCGSLYKTQVKMCSND 180
           VRHVPDLR+NL+ G+ LD++G+ + F N KW LT GS V+A+G   G+LY+T  ++C  +
Sbjct: 353 VRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGE 412

Query: 181 LNALEDDNSAELWHKRLGHMSEKGLHILANKSLISFAKDKPLKPCEY 321
           LNA +D+ S +LWHKR+GHMSEKGL ILA KSLIS+AK   +KPC+Y
Sbjct: 413 LNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDY 459


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  139 bits (349), Expect = 3e-31
 Identities = 61/107 (57%), Positives = 81/107 (75%)
 Frame = +1

Query: 1   VRHVPDLRLNLMPGMVLDKEGFINTFGNGKWELTTGSKVVARGSTCGSLYKTQVKMCSND 180
           VRHVPDLR+NL+ G+ LD++G+ N F N KW LT G+ V+A+G   G+LY+T  ++C  +
Sbjct: 354 VRHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAEICQGE 413

Query: 181 LNALEDDNSAELWHKRLGHMSEKGLHILANKSLISFAKDKPLKPCEY 321
           LNA  ++NSA+LWHKR+GH SEKGL IL+ KSLISF K   +KPC Y
Sbjct: 414 LNAAHEENSADLWHKRMGHTSEKGLQILSKKSLISFTKGTTIKPCNY 460


>emb|CAN78818.1| hypothetical protein VITISV_015505 [Vitis vinifera]
          Length = 339

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/107 (56%), Positives = 78/107 (72%)
 Frame = +1

Query: 1   VRHVPDLRLNLMPGMVLDKEGFINTFGNGKWELTTGSKVVARGSTCGSLYKTQVKMCSND 180
           +RHV DL LNL+ G  LDK+G+ N F  GKW+LT GS VVA+G +C +LYKTQ K+C+N+
Sbjct: 57  IRHVLDLHLNLISGFALDKQGYENHFDKGKWKLTKGSLVVAKGESCCTLYKTQGKVCNNE 116

Query: 181 LNALEDDNSAELWHKRLGHMSEKGLHILANKSLISFAKDKPLKPCEY 321
           L+A +   S ELWHKRLGHM EK L +LA KSLI  A ++ L  C++
Sbjct: 117 LHATK-GTSLELWHKRLGHMREKRLQVLARKSLIPLAINESLSYCDH 162


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/107 (51%), Positives = 77/107 (71%)
 Frame = +1

Query: 1   VRHVPDLRLNLMPGMVLDKEGFINTFGNGKWELTTGSKVVARGSTCGSLYKTQVKMCSND 180
           V+H+PD+R+NL+    LD EGF NTF + +W LT GS V+A+G+   SLY  Q ++  ++
Sbjct: 302 VKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVIAKGNKSSSLYLMQARVIDSN 361

Query: 181 LNALEDDNSAELWHKRLGHMSEKGLHILANKSLISFAKDKPLKPCEY 321
           +NA++DD++ ELWH RLGHMSEKGL ILA K+L+S  K   LK C +
Sbjct: 362 INAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCAH 408


>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
          Length = 1302

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/107 (50%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   VRHVPDLRLNLMPGMVLDKEGFINTFGNGKWELTTGSKVVARGSTCGSLYKTQVKMCSND 180
           V+H+PD+R+NL+    LD EGF NTF + +W+LT GS  +A+G+   SLY  Q ++  + 
Sbjct: 217 VKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKSSSLYLMQARVIDSS 276

Query: 181 LNALEDDNSAELWHKRLGHMSEKGLHILANKSLISFAKDKPLKPCEY 321
           +NA++DD++ ELWH RLGHMSEKGL ILA K+L+S  K   LK C +
Sbjct: 277 INAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKGSLKRCAH 323