BLASTX nr result
ID: Bupleurum21_contig00030081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030081
(822 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi... 386 e-105
emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera] 384 e-104
ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago ... 370 e-100
ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2... 364 1e-98
gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana] 361 9e-98
>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 386 bits (992), Expect = e-105
Identities = 179/272 (65%), Positives = 226/272 (83%)
Frame = -3
Query: 817 VMLGEYDEAMRLFRELQTLFEPDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVN 638
V GE+D A+ LF E+Q FEPDGY +QS+ +ACAG+ SLSLGMW H ++L++ D + VN
Sbjct: 205 VRFGEFDAALNLFGEMQKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVN 264
Query: 637 SVLLNNALVDMYCKCGSVDIAVQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLV 458
VLLN +LVDMYCKCGS+++A+Q+F RM KRDV SWNSMILGF+ HG+ AALEYF +V
Sbjct: 265 DVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMV 324
Query: 457 QDEGLVPNSITFNGVLTACNYRGLVDEGRRYFDMMISEYNVQPVLEHYGSLVDLLARAGH 278
+ E L+PN+ITF GVL+ACN+ GLV EGRRYFD+M++EY ++P LEHYG LVDLLARAG
Sbjct: 325 RTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGL 384
Query: 277 IDEALNVISNMPMKPDPVIWRSILDACSKKSGGLELSKEVARQIFESDDATCSGAYVLLS 98
IDEAL+V+SNMPM+PD VIWRS+LDAC K++ G+ELS+E+AR++ E++ CSG YVLLS
Sbjct: 385 IDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLS 444
Query: 97 RVYAVANRWNDVGLIRKWMADKGVKKEPGCSS 2
RVYA A+RWNDVG++RK M DKGV KEPGCSS
Sbjct: 445 RVYASASRWNDVGMVRKLMTDKGVVKEPGCSS 476
Score = 79.0 bits (193), Expect = 1e-12
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Frame = -3
Query: 751 DGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVNSVLLNNALVDMYCKCGSVDIAV 572
D + ++ ACA + +LS G HA +L+ + V +NN+LV Y C +D A
Sbjct: 127 DKHTFPFVLKACAYLFALSEGEQIHAQILK---LGFDSDVYINNSLVHFYATCDRLDFAK 183
Query: 571 QVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLVQDEGLVPNSITFNGVLTACNYR 392
VF+RM +R + SWN +I F G+ +AAL F + + P+ T + AC
Sbjct: 184 GVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEM--QKFFEPDGYTIQSIANACAGM 241
Query: 391 GLVDEGRRYFDMMISEYNVQPVLEHY--GSLVDLLARAGHIDEALNVISNMPMKPDPVIW 218
G + G ++ +++ V + SLVD+ + G ++ AL + MP K D W
Sbjct: 242 GSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMP-KRDVTSW 300
Query: 217 RSIL 206
S++
Sbjct: 301 NSMI 304
>emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 384 bits (985), Expect = e-104
Identities = 178/272 (65%), Positives = 225/272 (82%)
Frame = -3
Query: 817 VMLGEYDEAMRLFRELQTLFEPDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVN 638
V GE+D A+ LF E+Q FEPDGY +QS+ +ACAG+ SLSLGMW H ++L++ D + VN
Sbjct: 205 VRFGEFDAALNLFGEMQKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKXDADRVN 264
Query: 637 SVLLNNALVDMYCKCGSVDIAVQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLV 458
VLLN +LVDMYCKCGS+++A+Q+F RM KRDV SWNSMILGF+ HG+ AALEYF +V
Sbjct: 265 DVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMV 324
Query: 457 QDEGLVPNSITFNGVLTACNYRGLVDEGRRYFDMMISEYNVQPVLEHYGSLVDLLARAGH 278
+ E L+PN+ITF GVL+ACN+ GLV EGRRYFD+M++EY ++P LEHYG LVDLLARAG
Sbjct: 325 RTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGL 384
Query: 277 IDEALNVISNMPMKPDPVIWRSILDACSKKSGGLELSKEVARQIFESDDATCSGAYVLLS 98
IDEAL+V+SNMPM+PD VIWRS+LDAC K++ G+ELS+E+A ++ E++ CSG YVLLS
Sbjct: 385 IDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMASRVLEAEGGVCSGVYVLLS 444
Query: 97 RVYAVANRWNDVGLIRKWMADKGVKKEPGCSS 2
RVYA A+RWNDVG++RK M DKGV KEPGCSS
Sbjct: 445 RVYASASRWNDVGMVRKLMTDKGVVKEPGCSS 476
Score = 77.4 bits (189), Expect = 4e-12
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Frame = -3
Query: 751 DGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVNSVLLNNALVDMYCKCGSVDIAV 572
D + ++ ACA + +LS G HA +L+ + V +NN+LV Y C +D A
Sbjct: 127 DKHTFPFVLKACAYLFALSEGEQIHAQILK---LGFDSBVYINNSLVHFYATCDRLDFAK 183
Query: 571 QVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLVQDEGLVPNSITFNGVLTACNYR 392
VF+RM +R + SWN +I F G+ +AAL F + + P+ T + AC
Sbjct: 184 GVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEM--QKFFEPDGYTIQSIANACAGM 241
Query: 391 GLVDEGRRYFDMMISEYNVQPVLEHY--GSLVDLLARAGHIDEALNVISNMPMKPDPVIW 218
G + G ++ + + V + SLVD+ + G ++ AL + MP K D W
Sbjct: 242 GSLSLGMWAHVFLLKKXDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMP-KRDVTSW 300
Query: 217 RSIL 206
S++
Sbjct: 301 NSMI 304
>ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein
MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 370 bits (949), Expect = e-100
Identities = 176/269 (65%), Positives = 219/269 (81%)
Frame = -3
Query: 811 LGEYDEAMRLFRELQTLFEPDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVNSV 632
+G+YD + +F E+ ++EPD Y +QS+I AC G+ SLSLGMW HA+VL++ D V V
Sbjct: 165 VGDYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDV 224
Query: 631 LLNNALVDMYCKCGSVDIAVQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLVQD 452
L+N LVDMYCKCGS++IA QVFE M RDV+SWNS+ILGFA+HGKA+AAL+YFVR+V+
Sbjct: 225 LVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKV 284
Query: 451 EGLVPNSITFNGVLTACNYRGLVDEGRRYFDMMISEYNVQPVLEHYGSLVDLLARAGHID 272
E +VPNSITF GVL+ACN+ G+VDEG YF+MM EYNV+P L HYG LVDL ARAGHI
Sbjct: 285 EKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQ 344
Query: 271 EALNVISNMPMKPDPVIWRSILDACSKKSGGLELSKEVARQIFESDDATCSGAYVLLSRV 92
EALNV+S MP+KPD VIWRS+LDAC K+ +ELS+E+A+QIFES+ + C GAYVLLS+V
Sbjct: 345 EALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKV 404
Query: 91 YAVANRWNDVGLIRKWMADKGVKKEPGCS 5
YA A+RWNDVGL+RK M DKGV K+PGCS
Sbjct: 405 YASASRWNDVGLLRKLMNDKGVSKKPGCS 433
Score = 66.6 bits (161), Expect = 6e-09
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Frame = -3
Query: 754 PDGYALQSLISACAGVKSLSLGMWCHAYVLR---ELDCEAVNSVLLNNALVDMYCKCGSV 584
PD + ++ ACA + SL G HA+VL+ ELD NS L+ Y CG +
Sbjct: 83 PDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNS------LIHFYASCGYL 136
Query: 583 DIAVQVFERM-QKRDVNSWNSMILGFAMHGKAEAALEYFVRLVQDEGLVPNSITFNGVLT 407
+ A +VF+RM + R+V SWN MI +A G + L F ++ + P+ T V+
Sbjct: 137 ETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMM--KVYEPDCYTMQSVIR 194
Query: 406 ACNYRGLVDEGRRYFDMMISEYNVQPVLEHYGS--LVDLLARAGHIDEALNVISNMPMKP 233
AC G + G ++ + + V + + LVD+ + G ++ A V M +
Sbjct: 195 ACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYR- 253
Query: 232 DPVIWRSIL 206
D W SI+
Sbjct: 254 DVSSWNSII 262
>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
predicted protein [Populus trichocarpa]
Length = 607
Score = 364 bits (935), Expect = 1e-98
Identities = 174/273 (63%), Positives = 222/273 (81%), Gaps = 2/273 (0%)
Frame = -3
Query: 817 VMLGEYDEAMRLFRELQT-LFEPDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCE-A 644
V+ GE++ A++LF + Q FEPDGY +QS+I+ACAG+ +LSLGMW HA++LR A
Sbjct: 203 VLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVA 262
Query: 643 VNSVLLNNALVDMYCKCGSVDIAVQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVR 464
+ VL+NN+L+DMYCKCGS+DIA Q+FE MQK DV SWNSMILGFAMHGK E ALE F R
Sbjct: 263 RDHVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFER 322
Query: 463 LVQDEGLVPNSITFNGVLTACNYRGLVDEGRRYFDMMISEYNVQPVLEHYGSLVDLLARA 284
+++ VPNSITF GVL+ACN+R +V+EGR+YFDMM++EY ++P LEHYG LVD+LARA
Sbjct: 323 MIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARA 382
Query: 283 GHIDEALNVISNMPMKPDPVIWRSILDACSKKSGGLELSKEVARQIFESDDATCSGAYVL 104
G IDEAL ++++MPMKPD VIWRS+LD+C KK+ +ELS+ +ARQI ES++A SG YVL
Sbjct: 383 GLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVL 442
Query: 103 LSRVYAVANRWNDVGLIRKWMADKGVKKEPGCS 5
LSRVYA A+RWNDVGL+RK M + G+ KEPGCS
Sbjct: 443 LSRVYASASRWNDVGLVRKLMTNNGILKEPGCS 475
Score = 90.1 bits (222), Expect = 5e-16
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Frame = -3
Query: 754 PDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVNSVLLNNALVDMYCKCGSVDIA 575
PD + ++ ACA + +L G HA++L+ + V +NN+L+ Y CGS++ A
Sbjct: 124 PDNHTFPFVLKACAYLFALFEGKQAHAHLLK---LGFQSDVYINNSLIHFYASCGSLESA 180
Query: 574 VQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLVQDEGLVPNSITFNGVLTACNY 395
VF++M +R + SWN+MI F + G+ E AL+ FV+ Q + P+ T V+ AC
Sbjct: 181 KNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQF-QQQFFEPDGYTIQSVINACAG 239
Query: 394 RGLVDEGRRYFDMMISEYNVQPVLEHY---GSLVDLLARAGHIDEALNVISNMPMKPDPV 224
+ G ++ V +H SL+D+ + G +D A + M K D
Sbjct: 240 LCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGM-QKHDVT 298
Query: 223 IWRSILDACSKKSGGLELSKEVARQIFE 140
W S++ + G E+A + FE
Sbjct: 299 SWNSMILGFAMHGKG-----ELALECFE 321
>gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 361 bits (927), Expect = 9e-98
Identities = 168/280 (60%), Positives = 224/280 (80%), Gaps = 7/280 (2%)
Frame = -3
Query: 820 LVMLGEYDEAMRLFRELQTLFEPDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAV 641
LV GEYD A++LFRE+Q FEPDGY +QS++SACAG+ SLSLG W HA++LR+ D +
Sbjct: 284 LVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 343
Query: 640 NSVLLNNALVDMYCKCGSVDIAVQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRL 461
VL+ N+L++MYCKCGS+ +A QVF+ MQKRD+ SWN+MILGFA HG+AE A+ +F R+
Sbjct: 344 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 403
Query: 460 V-QDEGLVPNSITFNGVLTACNYRGLVDEGRRYFDMMISEYNVQPVLEHYGSLVDLLARA 284
V + E + PNS+TF G+L ACN+RG V++GR+YFDMM+ +Y ++P LEHYG +VDL+ARA
Sbjct: 404 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 463
Query: 283 GHIDEALNVISNMPMKPDPVIWRSILDACSKKSGGLELSKEVARQIF------ESDDATC 122
G+I EA++++ +MPMKPD VIWRS+LDAC KK +ELS+E+AR I ES + C
Sbjct: 464 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 523
Query: 121 SGAYVLLSRVYAVANRWNDVGLIRKWMADKGVKKEPGCSS 2
SGAYVLLSRVYA A+RWNDVG++RK M++ G++KEPGCSS
Sbjct: 524 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 563
Score = 79.0 bits (193), Expect = 1e-12
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Frame = -3
Query: 799 DEAMRLFRELQTLFE--PDGYALQSLISACAGVKSLSLGMWCHAYVLRELDCEAVNSVLL 626
+EA L+R++ E PD + ++ ACA + S G H +++ V +
Sbjct: 189 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH---GFGGDVYV 245
Query: 625 NNALVDMYCKCGSVDIAVQVFERMQKRDVNSWNSMILGFAMHGKAEAALEYFVRLVQDEG 446
NN L+ +Y CG +D+A +VF+ M +R + SWNSMI G+ ++AL+ F +
Sbjct: 246 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM--QRS 303
Query: 445 LVPNSITFNGVLTACNYRGLVDEGRRYFDMMISEYNVQPVLEHY--GSLVDLLARAGHID 272
P+ T VL+AC G + G ++ + +V ++ SL+++ + G +
Sbjct: 304 FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLR 363
Query: 271 EALNVISNMPMKPDPVIWRSIL 206
A V M K D W +++
Sbjct: 364 MAEQVFQGM-QKRDLASWNAMI 384
Score = 56.2 bits (134), Expect = 8e-06
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 6/239 (2%)
Frame = -3
Query: 733 SLISACAGVKSLSLGMWCHAYVLRELDCEAVNSVLLNNALVDMYCKCGSVDIAVQVFERM 554
SL C+ + L HA+ LR E ++ L ++ + V+ A +VF+ +
Sbjct: 110 SLAETCSDMSQLKQ---LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 166
Query: 553 QKRDVNSWNSMILGFA--MHGKAEAALEYFVRLVQDEGLVPNSITFNGVLTACNYRGLVD 380
+ WN++I A + K EA + Y L + E P+ TF VL AC Y
Sbjct: 167 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGES-SPDKHTFPFVLKACAYIFGFS 225
Query: 379 EGRRYFDMMISEYNVQPVLEHYGSLVDLLARAGHIDEALNVISNMPMKPDPVIWRSILDA 200
EG++ ++ V + G L+ L G +D A V MP + V W S++DA
Sbjct: 226 EGKQVHCQIVKHGFGGDVYVNNG-LIHLYGSCGCLDLARKVFDEMPER-SLVSWNSMIDA 283
Query: 199 C---SKKSGGLELSKEVARQIFESDDATCSGAYVLLSRVYAVA-NRWNDVGLIRKWMAD 35
+ L+L +E+ R FE D T + + +++ W L+RK D
Sbjct: 284 LVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 341