BLASTX nr result

ID: Bupleurum21_contig00030073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030073
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR57489.1| alpha-expansin 6 [Gossypium raimondii] gi|1500223...   167   8e-40
gb|ABR57485.1| alpha-expansin 6 [Gossypium hirsutum] gi|15002232...   165   3e-39
gb|AAM47002.1|AF512544_1 alpha-expansin precursor [Gossypium hir...   165   3e-39
gb|ABW96605.1| expansin 2, partial [Eriobotrya japonica]              165   4e-39
gb|ABR57484.1| alpha-expansin 6 [Gossypium arboreum]                  165   4e-39

>gb|ABR57489.1| alpha-expansin 6 [Gossypium raimondii] gi|150022328|gb|ABR57490.1|
           alpha-expansin 6 [Gossypium tomentosum]
           gi|150022330|gb|ABR57491.1| alpha-expansin 6 [Gossypium
           hirsutum] gi|150022332|gb|ABR57492.1| alpha-expansin 6
           [Gossypium barbadense] gi|150022334|gb|ABR57493.1|
           alpha-expansin 6 [Gossypium hirsutum]
          Length = 87

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/82 (92%), Positives = 81/82 (98%)
 Frame = +3

Query: 3   FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRT 182
           FNLVLITNVGGAGDVHAV+IKGSRTGWQPMSRNWGQNWQSN+YLNGQSLSFKVTTSDGRT
Sbjct: 5   FNLVLITNVGGAGDVHAVAIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRT 64

Query: 183 IISNNVAPAGWSFGQTFSGAQF 248
           ++SNNVAPAGWSFGQTF+G QF
Sbjct: 65  VVSNNVAPAGWSFGQTFTGRQF 86


>gb|ABR57485.1| alpha-expansin 6 [Gossypium hirsutum] gi|150022320|gb|ABR57486.1|
           alpha-expansin 6 [Gossypium hirsutum]
           gi|150022322|gb|ABR57487.1| alpha-expansin 6 [Gossypium
           barbadense] gi|150022324|gb|ABR57488.1| alpha-expansin 6
           [Gossypium mustelinum]
          Length = 87

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/82 (91%), Positives = 81/82 (98%)
 Frame = +3

Query: 3   FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRT 182
           FNLVLITNVGGAGDVHAV+IKGSRTGWQPMSRNWGQNWQSN+YLNGQSLSFKVTTSDGRT
Sbjct: 5   FNLVLITNVGGAGDVHAVAIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRT 64

Query: 183 IISNNVAPAGWSFGQTFSGAQF 248
           ++S+NVAPAGWSFGQTF+G QF
Sbjct: 65  VVSSNVAPAGWSFGQTFTGRQF 86


>gb|AAM47002.1|AF512544_1 alpha-expansin precursor [Gossypium hirsutum]
          Length = 248

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/82 (91%), Positives = 81/82 (98%)
 Frame = +3

Query: 3   FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRT 182
           FNLVLITNVGGAGDVHAV+IKGSRTGWQPMSRNWGQNWQSN+YLNGQSLSFKVTTSDGRT
Sbjct: 166 FNLVLITNVGGAGDVHAVAIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRT 225

Query: 183 IISNNVAPAGWSFGQTFSGAQF 248
           ++S+NVAPAGWSFGQTF+G QF
Sbjct: 226 VVSSNVAPAGWSFGQTFTGRQF 247


>gb|ABW96605.1| expansin 2, partial [Eriobotrya japonica]
          Length = 207

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +3

Query: 3   FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRT 182
           FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNS+LNGQSLSFKVTTSDGR 
Sbjct: 126 FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSFLNGQSLSFKVTTSDGRA 185

Query: 183 IISNNVAPAGWSFGQTFSGAQF 248
           I+SNNV PAGW+FGQTFSG QF
Sbjct: 186 IVSNNVVPAGWTFGQTFSGLQF 207


>gb|ABR57484.1| alpha-expansin 6 [Gossypium arboreum]
          Length = 87

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/82 (90%), Positives = 81/82 (98%)
 Frame = +3

Query: 3   FNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGRT 182
           FNLVLITNVGGAGDVHAV+IKGSRTGWQPMSRNWGQNWQSN+YLNGQSLSFKVTTSDGRT
Sbjct: 5   FNLVLITNVGGAGDVHAVAIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRT 64

Query: 183 IISNNVAPAGWSFGQTFSGAQF 248
           ++S+N+APAGWSFGQTF+G QF
Sbjct: 65  VVSSNIAPAGWSFGQTFTGRQF 86


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