BLASTX nr result

ID: Bupleurum21_contig00030048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030048
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatul...   407   e-111
gb|AFK40972.1| unknown [Medicago truncatula]                          403   e-110
ref|XP_002317560.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...   396   e-108
ref|XP_003543285.1| PREDICTED: uncharacterized protein LOC100800...   395   e-108

>ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|358345288|ref|XP_003636713.1| C2H2 zinc finger
           protein [Medicago truncatula]
           gi|355502648|gb|AES83851.1| C2H2 zinc finger protein
           [Medicago truncatula] gi|355508763|gb|AES89905.1| C2H2
           zinc finger protein [Medicago truncatula]
          Length = 437

 Score =  407 bits (1047), Expect = e-111
 Identities = 209/303 (68%), Positives = 235/303 (77%), Gaps = 4/303 (1%)
 Frame = +1

Query: 1   RSGCSRSIANLKDVIHGSKRHSECPVDCSPRSIGSSEFINPITHEVILSNSKFELKISXX 180
           RSGCSRSIANLKDVIHGSKRH E P  CSPRSIGSSEF+NPITHEVILSNS+ ELKI+  
Sbjct: 52  RSGCSRSIANLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGF 111

Query: 181 XXXXXXXXXXXXXXXVN---SAYLSSFRPSTPGPGGHLTVQNFNHQFKNSAAAATPPRKS 351
                           +   S Y+ + RP TPGPGGH T+  FN  F+ S+   TPPRKS
Sbjct: 112 QEGINGGGNNASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSS---TPPRKS 168

Query: 352 A-VLTEGSTFGGISNLRGGNGIPTKARAFVETGDSDSSTVTCHKCGEQFGKLETLEAHHL 528
             +L+EGS     +   GG G+ +  R  +ET  + SSTVTCHKCGEQF K E  EAHHL
Sbjct: 169 PFLLSEGS-----NGFHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHL 223

Query: 529 SKHAVTELVEGDSSRKIVEIICRSSWLKSDNHCGRIEKVLKVHNMQKMLARFEEYREIVK 708
           SKHAVTELVEGDSSRKIVEIICR+SWLKS+NHCGRIE+VLKVHNMQK LARFEEYRE+VK
Sbjct: 224 SKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVK 283

Query: 709 LKASKLPKKHPRCIADGNELLRFYGTTVACSLGINGCCSLCLSDKCCTCRIIRNGSSSKK 888
           +KASKL KKHPRC+ADGNELLRFYGTTVACSLG+NG  SLCLS+KCC CRIIR+G S+KK
Sbjct: 284 IKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKK 343

Query: 889 ELK 897
           ELK
Sbjct: 344 ELK 346


>gb|AFK40972.1| unknown [Medicago truncatula]
          Length = 437

 Score =  403 bits (1036), Expect = e-110
 Identities = 208/303 (68%), Positives = 234/303 (77%), Gaps = 4/303 (1%)
 Frame = +1

Query: 1   RSGCSRSIANLKDVIHGSKRHSECPVDCSPRSIGSSEFINPITHEVILSNSKFELKISXX 180
           RSGCSRSIANLKDVIHGSKRH E P  CSPRSIGSSEF+NPITHEVILSNS+ ELKI+  
Sbjct: 52  RSGCSRSIANLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGF 111

Query: 181 XXXXXXXXXXXXXXXVN---SAYLSSFRPSTPGPGGHLTVQNFNHQFKNSAAAATPPRKS 351
                           +   S Y+ + RP TPGPGGH T+  FN  F+ S+   TPPRKS
Sbjct: 112 QEGINGGGNNASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSS---TPPRKS 168

Query: 352 A-VLTEGSTFGGISNLRGGNGIPTKARAFVETGDSDSSTVTCHKCGEQFGKLETLEAHHL 528
             +L+EGS     +   GG G+ +  R  +ET  + SSTVTCHKCGEQF K E  EAHHL
Sbjct: 169 PFLLSEGS-----NGFHGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHL 223

Query: 529 SKHAVTELVEGDSSRKIVEIICRSSWLKSDNHCGRIEKVLKVHNMQKMLARFEEYREIVK 708
           SKHAVTELVEGDSSRKIVEIICR+SWLKS+NHCGRIE+VLKVHNMQK LARFEEYRE+VK
Sbjct: 224 SKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVK 283

Query: 709 LKASKLPKKHPRCIADGNELLRFYGTTVACSLGINGCCSLCLSDKCCTCRIIRNGSSSKK 888
           +KASKL KKHPRC+ADGNELLRFYGTTVACSLG+NG  SLCLS+KC  CRIIR+G S+KK
Sbjct: 284 IKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCWVCRIIRSGFSAKK 343

Query: 889 ELK 897
           ELK
Sbjct: 344 ELK 346


>ref|XP_002317560.1| predicted protein [Populus trichocarpa] gi|222860625|gb|EEE98172.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  402 bits (1034), Expect = e-110
 Identities = 212/314 (67%), Positives = 234/314 (74%), Gaps = 15/314 (4%)
 Frame = +1

Query: 1   RSGCSRSIANLKDVIHGSKRHSECPVDCSPRSIGSSEFINPITHEVILSNSKFELKISXX 180
           RSGCSRSIANLKDVIHGSKRH E P  CSPRSIGSSEF+NPITHEVILSNS+ ELKI+  
Sbjct: 40  RSGCSRSIANLKDVIHGSKRHMEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGF 99

Query: 181 XXXXXXXXXXXXXXX------------VNSAYLSSFRPSTPGPGGHLTVQNFNHQFKNSA 324
                                      V S ++ + RP TPGPGGH T+  FN  F+N  
Sbjct: 100 GGFQEGVGTGVSHGNNHNGVSGGSNGGVGSTFVGTLRPGTPGPGGHPTMHYFNPSFRN-- 157

Query: 325 AAATPPRKSAVLT---EGSTFGGISNLRGGNGIPTKARAFVETGDSDSSTVTCHKCGEQF 495
            AATPPRKS  L+   EGS FGG      G+G  + +R  +ET  + SST+TCHKCGEQF
Sbjct: 158 -AATPPRKSPFLSSDREGSGFGGSGIF--GSGAHSSSRVSLETDFNGSSTITCHKCGEQF 214

Query: 496 GKLETLEAHHLSKHAVTELVEGDSSRKIVEIICRSSWLKSDNHCGRIEKVLKVHNMQKML 675
            K E  E HHLSKHAVTELVEGDSSRKIVEIICR+SWLKS+NHCGRIE+VLKVHNMQK L
Sbjct: 215 TKWEAAEDHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTL 274

Query: 676 ARFEEYREIVKLKASKLPKKHPRCIADGNELLRFYGTTVACSLGINGCCSLCLSDKCCTC 855
           ARFEEYRE VK+KASKLPKKH RCIADGNELLRFYGTTVACSLGING  SLC+S+KC  C
Sbjct: 275 ARFEEYRETVKIKASKLPKKHSRCIADGNELLRFYGTTVACSLGINGSSSLCISEKCRVC 334

Query: 856 RIIRNGSSSKKELK 897
           RIIRNG S+KKELK
Sbjct: 335 RIIRNGFSAKKELK 348


>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score =  396 bits (1017), Expect = e-108
 Identities = 204/306 (66%), Positives = 233/306 (76%), Gaps = 7/306 (2%)
 Frame = +1

Query: 1   RSGCSRSIANLKDVIHGSKRHSECPVDCSPRSIGSSEFINPITHEVILSNSKFELKISXX 180
           RSGCSRSIANLKDVIHGSKRH E P  CSPRSIGSSEF+NPITHEVILSNS+ ELKI+  
Sbjct: 94  RSGCSRSIANLKDVIHGSKRHMEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGF 153

Query: 181 XXXXXXXXXXXXXXXVN---SAYLSSFRPSTPGPGGHLTVQNFNHQFKNSAAAATPPRKS 351
                               S ++ + RP TPGPGGH T+    H FK+ +   TPPRKS
Sbjct: 154 GGFQEGGGGGGGGGVGTGGGSTFVGTLRPGTPGPGGHPTM----HYFKSPS---TPPRKS 206

Query: 352 AVLT---EGSTFGGISNLRGGNG-IPTKARAFVETGDSDSSTVTCHKCGEQFGKLETLEA 519
             L    EGS FGG +   GG+G I +  RA ++T  + +S VTCHKCGEQF K E +E 
Sbjct: 207 PFLLSDREGSGFGGSTIFGGGSGAIHSNNRASLDTDSNGTSAVTCHKCGEQFSKWEAVET 266

Query: 520 HHLSKHAVTELVEGDSSRKIVEIICRSSWLKSDNHCGRIEKVLKVHNMQKMLARFEEYRE 699
           HHLSKHAVTELVEGDSSRKIVEIICR+SWLKS+NHCGRIE+VLKVHNMQK L RFEEYRE
Sbjct: 267 HHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLGRFEEYRE 326

Query: 700 IVKLKASKLPKKHPRCIADGNELLRFYGTTVACSLGINGCCSLCLSDKCCTCRIIRNGSS 879
           +VK KASKLPKKHPRC+ADGNELLRFYGTT+ C+LG+NG  +LC+SDKCC CRIIR+G S
Sbjct: 327 MVKTKASKLPKKHPRCLADGNELLRFYGTTMTCALGVNGSSNLCISDKCCVCRIIRHGFS 386

Query: 880 SKKELK 897
           +KKELK
Sbjct: 387 AKKELK 392


>ref|XP_003543285.1| PREDICTED: uncharacterized protein LOC100800127 [Glycine max]
          Length = 439

 Score =  395 bits (1016), Expect = e-108
 Identities = 211/313 (67%), Positives = 235/313 (75%), Gaps = 14/313 (4%)
 Frame = +1

Query: 1   RSGCSRSIANLKDVIHGSKRHSECPVDCSPRSIGSSEFINPITHEVILSNSKFELKIS-- 174
           RSGCSRSIANLKDVIHGSKRH E P  CSPRSIGSSEF+NPITHEVILSNS+ ELKI+  
Sbjct: 43  RSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGY 102

Query: 175 -----XXXXXXXXXXXXXXXXXVNSAYLSSF----RPSTPGPGGHLTVQNFNHQFKNSAA 327
                                  NS+ LS+F    RP TPGPGGH T+  FN  F+ S  
Sbjct: 103 GGFQEGGVGSDGGGGGANNGGVNNSSDLSTFVGTLRPGTPGPGGHPTMHYFNPSFRTS-- 160

Query: 328 AATPPRKSAVLT---EGSTFGGISNLRGGNGIPTKARAFVETGDSDSSTVTCHKCGEQFG 498
            +TPPRKS  L+   EGS   G+  L    G  +  R  +ET  + SSTVTCHKCGEQF 
Sbjct: 161 -STPPRKSPFLSSDKEGSGLHGVGVL----GPHSSTRVPLETDSNVSSTVTCHKCGEQFN 215

Query: 499 KLETLEAHHLSKHAVTELVEGDSSRKIVEIICRSSWLKSDNHCGRIEKVLKVHNMQKMLA 678
           K E  EAHHLSKHAVTELVEGDSSRKIVEIICR+SWLKS+N CGRIE+VLKVHNMQK LA
Sbjct: 216 KWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLA 275

Query: 679 RFEEYREIVKLKASKLPKKHPRCIADGNELLRFYGTTVACSLGINGCCSLCLSDKCCTCR 858
           RFEEYRE+VK+KASKLPKKHPRC+ADGNELLRFYGTTVACSLG++G  SLCLS+KCC CR
Sbjct: 276 RFEEYRELVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLSGSSSLCLSEKCCVCR 335

Query: 859 IIRNGSSSKKELK 897
           IIRNG S+K+ELK
Sbjct: 336 IIRNGFSAKEELK 348


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