BLASTX nr result

ID: Bupleurum21_contig00030038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030038
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315190.1| predicted protein [Populus trichocarpa] gi|1...   102   2e-20
ref|XP_004138443.1| PREDICTED: uncharacterized protein LOC101208...   101   7e-20
ref|XP_003539069.1| PREDICTED: uncharacterized protein LOC100787...    99   4e-19
ref|XP_003552627.1| PREDICTED: uncharacterized protein LOC100798...    95   5e-18
ref|XP_003540715.1| PREDICTED: uncharacterized protein LOC100808...    95   5e-18

>ref|XP_002315190.1| predicted protein [Populus trichocarpa] gi|118483550|gb|ABK93673.1|
           unknown [Populus trichocarpa]
           gi|222864230|gb|EEF01361.1| predicted protein [Populus
           trichocarpa]
          Length = 180

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
 Frame = +3

Query: 6   LKLAIRNAEKEN----NELEVNHV--ARVNMRILRVGIMASAVGSVCGCVFLMLALVNLV 167
           LK AIR A+  N    N LE   +  A VN  ++RVG++ S +GSVCGCVFLMLALVN+V
Sbjct: 79  LKQAIRVAKTSNHTHGNYLEAAELMLAHVNKNLIRVGMLVSGIGSVCGCVFLMLALVNVV 138

Query: 168 QIKLGILSCFSWYTFSAVGPLVTLVPLALVIYMCFVLHAFTR 293
           Q+KLG L C + + ++AV PLV LVP+AL++Y+  VL+AFTR
Sbjct: 139 QLKLGSLGCGNGHIYAAVVPLVILVPVALLVYVSIVLYAFTR 180


>ref|XP_004138443.1| PREDICTED: uncharacterized protein LOC101208865 [Cucumis sativus]
           gi|449495300|ref|XP_004159793.1| PREDICTED:
           uncharacterized protein LOC101224173 [Cucumis sativus]
          Length = 172

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/95 (56%), Positives = 67/95 (70%)
 Frame = +3

Query: 3   GLKLAIRNAEKENNELEVNHVARVNMRILRVGIMASAVGSVCGCVFLMLALVNLVQIKLG 182
           GLK AIR A+            RVN   LR+G++ S +GSVCGC FLM+AL+N+VQIKLG
Sbjct: 77  GLKQAIRIAKSPFYH-PTEFFIRVNKTALRIGMLVSGIGSVCGCGFLMMALINVVQIKLG 135

Query: 183 ILSCFSWYTFSAVGPLVTLVPLALVIYMCFVLHAF 287
            LSC S  TF+AV PLV LVP+ALV+Y+C V +AF
Sbjct: 136 TLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAF 170


>ref|XP_003539069.1| PREDICTED: uncharacterized protein LOC100787928 [Glycine max]
          Length = 194

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/94 (53%), Positives = 69/94 (73%)
 Frame = +3

Query: 12  LAIRNAEKENNELEVNHVARVNMRILRVGIMASAVGSVCGCVFLMLALVNLVQIKLGILS 191
           + + ++   NN   V+ VA++N  +LR+G + SA GSV GC FL++ALV+LVQIKLG L 
Sbjct: 101 IVLDSSNNNNNNNWVHSVAKINTVVLRLGTLVSAFGSVFGCGFLVMALVDLVQIKLGTLG 160

Query: 192 CFSWYTFSAVGPLVTLVPLALVIYMCFVLHAFTR 293
           C S +TF+AV PL+ LVP AL+IY+  VL+AFTR
Sbjct: 161 CGSPHTFAAVAPLLVLVPTALLIYVVLVLYAFTR 194


>ref|XP_003552627.1| PREDICTED: uncharacterized protein LOC100798297 [Glycine max]
          Length = 180

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +3

Query: 54  VNH-VARVNMRILRVGIMASAVGSVCGCVFLMLALVNLVQIKLGILSCFSWYTFSAVGPL 230
           V+H VA VN   LR+G++ S VGSV GC FLMLALVN+ QIKLG L+C S +T++AV PL
Sbjct: 100 VDHLVADVNRTALRLGMLVSGVGSVAGCAFLMLALVNVAQIKLGTLACGSSHTYAAVVPL 159

Query: 231 VTLVPLALVIYMCFVLHAFTR 293
           +  VPLAL+IY+  VL+AFTR
Sbjct: 160 LIFVPLALLIYVSLVLYAFTR 180


>ref|XP_003540715.1| PREDICTED: uncharacterized protein LOC100808626 [Glycine max]
          Length = 192

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = +3

Query: 39  NNELEVNHVARVNMRILRVGIMASAVGSVCGCVFLMLALVNLVQIKLGILSCFSWYTFSA 218
           NN   V+  A++N  +LR+G + SA GSV GC FL++ALV+LVQIKLG L+C S +TF+A
Sbjct: 108 NNNNWVHSAAKINTVVLRLGTLVSAFGSVFGCGFLVMALVDLVQIKLGTLACGSPHTFAA 167

Query: 219 VGPLVTLVPLALVIYMCFVLHAFTR 293
           V PL+ LVP AL+IY+  VL++FTR
Sbjct: 168 VAPLLVLVPTALLIYVVLVLYSFTR 192


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