BLASTX nr result

ID: Bupleurum21_contig00030035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030035
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29903.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245...   100   3e-19
ref|XP_002532403.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|1...    90   2e-16
ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26...    87   2e-15

>emb|CBI29903.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  107 bits (266), Expect = 2e-21
 Identities = 84/188 (44%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
 Frame = +3

Query: 51  MPESRDRLLIPGDAXXXXXXXXXXXXLQILAYEQEISVR---SPFRWGTIPMTG--TTRV 215
           MPESRDRL  P D             L ILA   E S     SP R G +   G  T R+
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGI-LGILADGSERSSNLFASPSRRGGVGRGGFGTPRI 59

Query: 216 ATTRSNATTNMR------DRRPTRSFGRTRSGIS--SVLPSWYPRKALGDITPIVQAIKR 371
            T R       R      +  P    GR   G S  SVLPSWYPR  L DIT +V+AI+R
Sbjct: 60  GTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSVLPSWYPRTPLRDITHVVRAIER 119

Query: 372 RQARLREGECLQLTSPSPQGQS-FHTSYVPVVGAPLEDDHCMISPSPTTKVKHSAPSVGK 548
           R+ARLRE +  Q+  P PQ  S  H   +P   A LE D  MISPSPT+ +K    +VGK
Sbjct: 120 RRARLREIDGQQIDIPIPQDISDVHDPILPPSSAQLEQDISMISPSPTSGMKLVPKAVGK 179

Query: 549 VPKILLDI 572
           VPKILLDI
Sbjct: 180 VPKILLDI 187


>ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245175 [Vitis vinifera]
          Length = 266

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 85/210 (40%), Positives = 97/210 (46%), Gaps = 36/210 (17%)
 Frame = +3

Query: 51  MPESRDRLLIPGDAXXXXXXXXXXXXLQILAYEQEISVR---SPFRWGTIPMT------- 200
           MPESRDRL  P D             L ILA   E S     SP R  T   T       
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGI-LGILADGSERSSNLFASPSRRETTTRTTTLGARG 59

Query: 201 -----------------GTTRVATTRSNATTNMR------DRRPTRSFGRTRSGIS--SV 305
                            GT R+ T R       R      +  P    GR   G S  SV
Sbjct: 60  ATGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSV 119

Query: 306 LPSWYPRKALGDITPIVQAIKRRQARLREGECLQLTSPSPQGQS-FHTSYVPVVGAPLED 482
           LPSWYPR  L DIT +V+AI+RR+ARLRE +  Q+  P PQ  S  H   +P   A LE 
Sbjct: 120 LPSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDIPIPQDISDVHDPILPPSSAQLEQ 179

Query: 483 DHCMISPSPTTKVKHSAPSVGKVPKILLDI 572
           D  MISPSPT+ +K    +VGKVPKILLDI
Sbjct: 180 DISMISPSPTSGMKLVPKAVGKVPKILLDI 209


>ref|XP_002532403.1| conserved hypothetical protein [Ricinus communis]
           gi|223527899|gb|EEF29988.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 72/193 (37%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
 Frame = +3

Query: 51  MPESRDRLLIPGDAXXXXXXXXXXXX--------LQILAYEQEISVR--SPFRWGTIPMT 200
           MPE+RDRL  P D                     L+   +   I+ R  +  R GT+ ++
Sbjct: 1   MPEARDRLSRPIDIATVFSRRRSGLIGVYQDQPDLETALFGSPITSRLDTATRTGTVGLS 60

Query: 201 ---------GTTRVATTRSNATTNMRDRRPTRSFGRTRSGISSVLPSWYPRKALGDITPI 353
                    GT R  T R         R  T   GR  +G  SVLPSWYPR  L DIT I
Sbjct: 61  PRGRGRGSFGTPRNQTLRGRHPYVTIGRENTPVTGRRGNGNRSVLPSWYPRTPLRDITAI 120

Query: 354 VQAIKRRQARLREGECLQLTSPSPQGQSFHTSYVPVVGAPLEDDHCMISPSPTTKVKHSA 533
           V+AI+RR+  L EG   ++ SP P       S  P   A LE  + M+SP P+ +VK   
Sbjct: 121 VRAIERRRELLGEGRAQEIESPVPHAYEVPDSSEPSAVAHLEHSNSMMSPIPSLQVKRCP 180

Query: 534 PSVGKVPKILLDI 572
           P+VGKV KILLDI
Sbjct: 181 PTVGKVSKILLDI 193


>ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|118483996|gb|ABK93885.1|
           unknown [Populus trichocarpa]
           gi|222872923|gb|EEF10054.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 70/192 (36%), Positives = 95/192 (49%), Gaps = 18/192 (9%)
 Frame = +3

Query: 51  MPESRDRLLIPGDAXXXXXXXXXXXXLQILAYEQEISVR---SP----------FRWGTI 191
           MP SRDRL  P D             L +   + E+ +    SP             GTI
Sbjct: 1   MPVSRDRLSSPVDIAALFAARRQSRILGVYQDQPELDMALFGSPRPNAATRTQTVGAGTI 60

Query: 192 PMTGTTRVATTRSNA--TTNMRDRRP---TRSFGRTRSGISSVLPSWYPRKALGDITPIV 356
            + G   + T R     TT  R+  P   +   GR R G +SVLP+WYPR  L D+T +V
Sbjct: 61  AVRGRGGLGTPRGRGGRTTLGRENIPPPGSARRGRGR-GSNSVLPAWYPRTPLRDVTAVV 119

Query: 357 QAIKRRQARLREGECLQLTSPSPQGQSFHTSYVPVVGAPLEDDHCMISPSPTTKVKHSAP 536
           +AI+RR+ RL   + L++ SP PQ +  H S      A LE  + ++SP PTT VK  + 
Sbjct: 120 RAIERRRERLGGSDGLEIRSPMPQVRMNHDSSEATPVAHLEHSNRIMSPKPTTAVKGCSS 179

Query: 537 SVGKVPKILLDI 572
           ++GKVPKIL  I
Sbjct: 180 TIGKVPKILQHI 191


>ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis
           thaliana] gi|110735686|dbj|BAE99823.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255003|gb|AEC10097.1| uv-b-insensitive 4
           [Arabidopsis thaliana]
          Length = 259

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
 Frame = +3

Query: 258 RPTRSFGRTRSG----ISSVLPSWYPRKALGDITPIVQAIKRRQARLREGECLQLTSPSP 425
           R   S G TR G     +SVLPSWYPR  L DI+ +V+AI+RR+AR+ EG    + +P+P
Sbjct: 93  RENMSLGVTRRGRARASNSVLPSWYPRTPLRDISAVVRAIERRRARMGEGVGRDIETPTP 152

Query: 426 QGQSFHTSYVPVVGAPLEDDHCMISPSPTTKVKHS-APSVGKVPKILLDI 572
           Q      S VP+ GA LE D+ M++P P+   K    PS  KV +ILLDI
Sbjct: 153 QQLGVLDSLVPLSGAHLEHDYSMVTPGPSIGFKRPWPPSTAKVHQILLDI 202


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