BLASTX nr result

ID: Bupleurum21_contig00030021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030021
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522600.1| conserved hypothetical protein [Ricinus comm...   126   3e-27
ref|NP_001236514.1| uncharacterized protein LOC100500336 [Glycin...   109   4e-22
ref|XP_002266756.1| PREDICTED: uncharacterized protein LOC100265...   106   3e-21
ref|XP_002300197.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21
ref|XP_002323747.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002522600.1| conserved hypothetical protein [Ricinus communis]
           gi|223538076|gb|EEF39687.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  126 bits (316), Expect = 3e-27
 Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 8/194 (4%)
 Frame = +3

Query: 6   SNLGLKHAVCRFGG-----DHGRFVYQRQRFFSCSNAVVFRKHKIDITEKKKVELQSAAP 170
           +N+ L+H  C          +G  + Q  + F+ +N   ++ H  D  + K ++     P
Sbjct: 27  NNVSLRHGSCSSSKLANSIGYGHPMNQELQMFT-ANGGTWKNH--DAKKLKVIKDDMVRP 83

Query: 171 ALPRP---NIATWIKWFVGTIFSLLLPFFKQRWDNLLLLEGKLENXXXXXXXXXXXXXXX 341
           ++P P   N  TW KW +G+I SL LPF+KQ+W+ L ++EG+ E                
Sbjct: 84  SVPDPPRFNFPTWAKWVLGSILSLFLPFWKQKWEKLKMIEGQAEIVLEEVETVAAVVGKA 143

Query: 342 XIRTEKISAEVANKLPGDCKLKEAALIVEHISNVAAHDAQLAENIIHKANDLKEDVDELE 521
            +  EK SAE A KLP + KLK+AAL+VE IS   AHDAQL ++ IHK ++LK D+D+LE
Sbjct: 144 AMAAEKFSAEEAEKLPDNGKLKKAALLVEGISKATAHDAQLTKDFIHKVDNLKHDLDDLE 203

Query: 522 KMVEPIIDGIAQVK 563
            MVEP I+ +   K
Sbjct: 204 TMVEPAIEKLIHHK 217


>ref|NP_001236514.1| uncharacterized protein LOC100500336 [Glycine max]
           gi|255630071|gb|ACU15389.1| unknown [Glycine max]
          Length = 211

 Score =  109 bits (272), Expect = 4e-22
 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
 Frame = +3

Query: 141 KKVELQSAAPALPRPNIAT----WIKWFVGTIFSLLLPFFKQRWDNLLLLEGKLENXXXX 308
           K V+ Q  APA P   I T    W++W +G + SLLLPF+K  W  L +++ + E     
Sbjct: 69  KDVKAQPEAPA-PASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEE 127

Query: 309 XXXXXXXXXXXXIRTEKISAEVANKLPGDCKLKEAALIVEHISNVAAHDAQLAENIIHKA 488
                          EK+S +VA  LP + KL++AAL+VE  S  AAHDAQL E  IHK 
Sbjct: 128 AEAVAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKV 187

Query: 489 NDLKEDVDELEKMVEPIIDGIAQV 560
            +LK D+D+LE  VEP+ID I ++
Sbjct: 188 EELKNDLDDLEAFVEPVIDKIVKI 211


>ref|XP_002266756.1| PREDICTED: uncharacterized protein LOC100265791 [Vitis vinifera]
           gi|296087443|emb|CBI34032.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  106 bits (264), Expect = 3e-21
 Identities = 69/170 (40%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
 Frame = +3

Query: 54  GRFVYQRQRFFSCSNAVVFRKHKIDITEKKKVELQSAA-PALPRPNI-ATWIKWFVGTIF 227
           G  +++  R  S +++   R    ++ +  K ++Q A  PA    +I  +W K   G+I 
Sbjct: 44  GYSIHKGLRSISANSSGFCRASHTNMAKDGKEKVQPATVPAASAWSIFPSWAKVLAGSIL 103

Query: 228 SLLLPFFKQRWDNLLLLEGKLENXXXXXXXXXXXXXXXXIRTEKISAEVANKLPGDCKLK 407
           SLLLPF K  WD L+ LEG+ E                   TEK+S +VAN LP   KLK
Sbjct: 104 SLLLPFLK--WDKLMRLEGEAEIVVAEVEKVATV-------TEKVSGDVANILPDKSKLK 154

Query: 408 EAALIVEHISNVAAHDAQLAENIIHKANDLKEDVDELEKMVEPIIDGIAQ 557
           +AAL+VEHIS V A DA+L E+ I K + LK+DV +LE+MVEPII  I++
Sbjct: 155 DAALLVEHISKVTAEDAELTEHFIQKVDVLKQDVQDLERMVEPIIHNISE 204


>ref|XP_002300197.1| predicted protein [Populus trichocarpa] gi|222847455|gb|EEE85002.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  105 bits (261), Expect = 7e-21
 Identities = 53/130 (40%), Positives = 75/130 (57%)
 Frame = +3

Query: 168 PALPRPNIATWIKWFVGTIFSLLLPFFKQRWDNLLLLEGKLENXXXXXXXXXXXXXXXXI 347
           P  P  N   W KW +GTI S+LLPF++Q W  L  +E ++                   
Sbjct: 74  PNPPGSNFPRWAKWILGTILSILLPFWQQEWKKLRRIEAEVVEKVATV------------ 121

Query: 348 RTEKISAEVANKLPGDCKLKEAALIVEHISNVAAHDAQLAENIIHKANDLKEDVDELEKM 527
             EK+S EVA  LP + KLKE AL++E +S   AHDA+L ++ IHK + ++ D+D+LE M
Sbjct: 122 -AEKVSEEVAEVLPENGKLKETALLMEAVSKATAHDAKLTQDFIHKVDAVRHDIDDLETM 180

Query: 528 VEPIIDGIAQ 557
           VEP+ID + Q
Sbjct: 181 VEPVIDKLVQ 190


>ref|XP_002323747.1| predicted protein [Populus trichocarpa] gi|222866749|gb|EEF03880.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  101 bits (252), Expect = 7e-20
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
 Frame = +3

Query: 168 PALPRP---NIATW-----------IKWFVGTIFSLLLPFFKQRWDNLLLLEGKLENXXX 305
           P +P P   N  TW            KW +G+I S+LLPF+KQ+ + L  +EG+ +    
Sbjct: 8   PPVPNPPGSNFPTWNNIARNVTPCRAKWILGSILSILLPFWKQKREELKRIEGEADIIVD 67

Query: 306 XXXXXXXXXXXXXIRTEKISAEVANKLPGDCKLKEAALIVEHISNVAAHDAQLAENIIHK 485
                           EK+S EVA  LP + KLKE AL++EH++   AHDA+L ++ IHK
Sbjct: 68  EVEHVAEEIEKVATVAEKVSEEVAEVLPENGKLKETALLIEHVTKATAHDAKLTQDFIHK 127

Query: 486 ANDLKEDVDELEKMVEPIIDGIAQ 557
            + +K D+D+L+ MV+P+I+ I Q
Sbjct: 128 VDAVKHDIDDLKIMVDPVIETIVQ 151


Top