BLASTX nr result

ID: Bupleurum21_contig00030015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030015
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307592.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002520717.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002300836.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002879365.1| hypothetical protein ARALYDRAFT_482142 [Arab...    66   3e-09
gb|ABL66788.1| At2g32100 [Arabidopsis thaliana]                        64   1e-08

>ref|XP_002307592.1| predicted protein [Populus trichocarpa] gi|222857041|gb|EEE94588.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/99 (44%), Positives = 57/99 (57%)
 Frame = -2

Query: 299 MPRTLARNLQMCFTNIMHIXXXXXXSKNIDQQKDESNPNNISSILIKNFNSIYHDPDNYN 120
           M  T+ RNL +CFT I         S       D+ +     + LIKN+NS+Y DP   +
Sbjct: 1   MAGTIGRNLNLCFTKIRRPLPPHDQSPTTLLTPDDHS----HTFLIKNYNSLY-DPTIDS 55

Query: 119 HTLTISTSNSGDTAPDLATAYASQRFFFSSPGHSNSIIE 3
            + + S+S+S  + PD AT  ASQRFFFSSPG SNSIIE
Sbjct: 56  ASSSTSSSSSSSSEPDFATVCASQRFFFSSPGRSNSIIE 94


>ref|XP_002520717.1| conserved hypothetical protein [Ricinus communis]
           gi|223540102|gb|EEF41679.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/99 (38%), Positives = 52/99 (52%)
 Frame = -2

Query: 299 MPRTLARNLQMCFTNIMHIXXXXXXSKNIDQQKDESNPNNISSILIKNFNSIYHDPDNYN 120
           MP TL +NL +CFT I +               +  +P+    ++I N+NS++       
Sbjct: 1   MPVTLGKNLHLCFTKIKN-------------PLESESPSTSHPLVINNYNSLFESKS--- 44

Query: 119 HTLTISTSNSGDTAPDLATAYASQRFFFSSPGHSNSIIE 3
                   +S  + PD AT +ASQRFFFSSPGHSNSIIE
Sbjct: 45  -----PPRSSSSSEPDFATVFASQRFFFSSPGHSNSIIE 78


>ref|XP_002300836.1| predicted protein [Populus trichocarpa] gi|222842562|gb|EEE80109.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
 Frame = -2

Query: 299 MPRTLARNLQMCFTNIMH--IXXXXXXSKNIDQQKDESNPNNISSILIKNFNSIY-HDPD 129
           M  T  RNL +CF N +   +        N     D S+P      L KN+NS+Y H  D
Sbjct: 1   MAGTAGRNLNLCFINKIKRPLPPDHQPPSNPLTPDDHSHP-----FLFKNYNSLYDHTID 55

Query: 128 NYN-HTLTISTSNSGDTAPDLATAYASQRFFFSSPGHSNSIIE 3
           + +  T T  +S+S  + PD A+ YASQRFFFSSPG SNSIIE
Sbjct: 56  SASASTSTSISSSSSSSEPDFASVYASQRFFFSSPGSSNSIIE 98


>ref|XP_002879365.1| hypothetical protein ARALYDRAFT_482142 [Arabidopsis lyrata subsp.
           lyrata] gi|297325204|gb|EFH55624.1| hypothetical protein
           ARALYDRAFT_482142 [Arabidopsis lyrata subsp. lyrata]
          Length = 241

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
 Frame = -2

Query: 299 MPRTLARNLQMCF-TNIMHIXXXXXXSKNIDQQKDESNPNNISSILIKNFNSIYHDPDNY 123
           MP+ L ++L +CF +N+           +   Q     P+  S +L+ NFN +YH  +N 
Sbjct: 1   MPKILWKSLHLCFPSNLTKCYSSPCIPPSSADQDFTDQPSRPSIVLLNNFNLLYHHDNNQ 60

Query: 122 NHTLTISTSNSG-----------------DTAPDLATAYASQRFFFSSPGHSNSIIE 3
           +H +T   S+S                  D +PD++ A+AS+RFFFSSPG SN+I +
Sbjct: 61  HHRVTDLPSSSATTTPAATSSSSTSSYESDISPDVSAAFASRRFFFSSPGRSNAITD 117


>gb|ABL66788.1| At2g32100 [Arabidopsis thaliana]
          Length = 244

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 20/119 (16%)
 Frame = -2

Query: 299 MPRTLARNLQMCF-TNIMHIXXXXXXSKNIDQQKDESNPNNISSILIKNFNSIYHDPDNY 123
           MP+ L ++L +CF +N+           +         PN  S +L+ NFN +YH+ DN+
Sbjct: 1   MPKILRKSLHLCFPSNLTKCYSSPCIPPSSADPDGIIQPNRPSIVLLNNFNLLYHN-DNH 59

Query: 122 NH-------------TLTISTSNSG------DTAPDLATAYASQRFFFSSPGHSNSIIE 3
           +H             T   +TS+S       D +PD++ A+AS+RFFFSSPG SN+I +
Sbjct: 60  HHPHRVIDLPSSSTTTTPAATSSSSTSSYESDISPDVSAAFASRRFFFSSPGRSNAITD 118


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