BLASTX nr result
ID: Bupleurum21_contig00030010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030010
(824 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 118 1e-24
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g... 114 3e-23
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1... 112 1e-22
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine... 111 2e-22
dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana] 109 6e-22
>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 389
Score = 118 bits (296), Expect = 1e-24
Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
Frame = +2
Query: 26 ETIVRFDLGLEQFKELPFPPADNCGGLFVNFNFRNVIHVGESLCIRDDYPES-RLDIWLM 202
+TIV DLG+E + +P P FV+ N + V + Y S R+D+W+M
Sbjct: 221 DTIVALDLGVEDYHVVPKPE-------FVDMNCNMGVGVLQGCLSLLAYARSERVDVWVM 273
Query: 203 KNNCEMENPWYKAFSVEQSGPLGSFRSLRPITFSKSGKDVLVEVDGARLVWYDLEKKAVS 382
+ E+ W K FSV + +G RSL+P+ +SKSG +VL+E D L WYDL++K V
Sbjct: 274 EEYMVKES-WSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVV 332
Query: 383 DVRIHGLPVKFDSHLYTESLLQLPSNKQLHTDKHEKKQ---QKKRDEFLSKGFKLRL 544
+V I G+P+ F++ + SL+ L +N+ KHE K+ +KKRD+FLS+GFKL L
Sbjct: 333 NVWIQGVPITFEAEICVGSLVPLNANRLRRRPKHEHKETKNRKKRDDFLSEGFKLVL 389
>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
gi|222854763|gb|EEE92310.1| f-box family protein
[Populus trichocarpa]
Length = 396
Score = 114 bits (284), Expect = 3e-23
Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 6/186 (3%)
Frame = +2
Query: 5 KNP-GNCTETIVRFDLGLEQFKELPFPPADNCGGLFVNFNFRNVIHVGES-LCIRDDYPE 178
+NP N +V DLG+E ++E+ P + + NF + V LC ++
Sbjct: 220 ENPESNVANIVVALDLGVEDYREVLQPE-------YKDKNFYIDLGVLRGCLCFLANFLG 272
Query: 179 SRLDIWLMKNNCEMENPWYKAFSVEQSGPLGSFRSLRPITFSKSGKDVLVEVDGARLVWY 358
R+D+W+MK E+ W K FSV Q +G RSL+P+ +SKSG +VL+E D L WY
Sbjct: 273 ERVDVWMMKEYGVKES-WTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWY 331
Query: 359 DLEKKAVSDVRIHGLPVKFDSHLYTESLLQLPSNKQL----HTDKHEKKQQKKRDEFLSK 526
DL++K V + RI G+P F++ + ESL+ + N+ L D + K + KRD+FLS+
Sbjct: 332 DLKRKQVKN-RIPGIPYSFEADTFVESLISVSPNRHLDGRTQDDDEDSKDRNKRDDFLSE 390
Query: 527 GFKLRL 544
GFKL L
Sbjct: 391 GFKLVL 396
>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
gi|145333023|ref|NP_001078377.1| F-box protein CPR30
[Arabidopsis thaliana]
gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
protein CPR30; AltName: Full=Protein CONSTITUTIVE
EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
F-box protein CPR30 [Arabidopsis thaliana]
gi|332657748|gb|AEE83148.1| F-box protein CPR30
[Arabidopsis thaliana]
Length = 413
Score = 112 bits (280), Expect = 1e-22
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 13/184 (7%)
Frame = +2
Query: 32 IVRFDLGLEQFKELPFPPADNCGGLFVNFNFRNVIHVGESLCIRDDYPESRLDIWLMKNN 211
IVRFDL LE+F+ + FP A G + + + + + LC+ +Y +S +D+W+MK
Sbjct: 235 IVRFDLALEEFEIVRFPEAVANGNVDIQMD---IGVLDGCLCLMCNYDQSYVDVWMMKEY 291
Query: 212 CEMENPWYKAFSVEQSGPLGSFRSLRPITFSKSGKDVLVEVDGARLVWYDLEKKAVSDVR 391
+ + W K F+V++ + SF +RP+ +SK K VL+E++ +LVW+DLE K +S +R
Sbjct: 292 -NVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLR 350
Query: 392 IHGLPVKFDSHLYTESLLQLPSNKQLHTDKHEKKQQ-------------KKRDEFLSKGF 532
I P + + L SL+ L L+ K+ K+QQ K+RD+FLSKGF
Sbjct: 351 IKDCPSSYSAELVVSSLV-LGCKGDLNNIKYRKEQQAKEAREAKIMQNTKRRDDFLSKGF 409
Query: 533 KLRL 544
KL L
Sbjct: 410 KLVL 413
>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
Length = 392
Score = 111 bits (277), Expect = 2e-22
Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Frame = +2
Query: 26 ETIVRFDLGLEQFKELPFPPADNCGGLFVNFNFRNVIHVGESLCIRDDYPESRLDIWLMK 205
+ IV FDL E F ELP P GG F +V +G+SLC+ ++ S++D+W+M+
Sbjct: 224 DLIVAFDLTHEIFTELPLPDTGGVGGGFEI----DVALLGDSLCMTVNFHNSKMDVWVMR 279
Query: 206 NNCEMENPWYKAFSVEQSGPLGSFRSLRPITFSKSGKDVLVEVDGARLVWYDLEKKAVSD 385
++ W K F++E+S L SF+ LRP+ +S G VL+E D RL WYDL KK V+
Sbjct: 280 EYNRGDS-WCKLFTLEESRELRSFKCLRPLGYSSDGNKVLLEHDRKRLCWYDLGKKEVTL 338
Query: 386 VRIHGLPVKFDSHLYTESLLQ---LPSNKQLHTDKHEKKQQKKRDEFLSKGFKLRL 544
VRI GLP ++ + +L+ LP +Q+ Q++RD+FLS+GFKL L
Sbjct: 339 VRIQGLPNLNEAMICLGTLVTPYFLP--RQICRKSPTLGCQRRRDDFLSQGFKLTL 392
>dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]
Length = 413
Score = 109 bits (273), Expect = 6e-22
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 13/184 (7%)
Frame = +2
Query: 32 IVRFDLGLEQFKELPFPPADNCGGLFVNFNFRNVIHVGESLCIRDDYPESRLDIWLMKNN 211
IVRFDL LE+F+ + FP A G + + + + + LC+ +Y +S +D+W+MK
Sbjct: 235 IVRFDLALEEFEIVRFPEAVANGNVDIQMD---IGVLDGCLCLMCNYDQSYVDVWMMKEY 291
Query: 212 CEMENPWYKAFSVEQSGPLGSFRSLRPITFSKSGKDVLVEVDGARLVWYDLEKKAVSDVR 391
+ + W K F+V++ + SF +RP+ +SK K VL+E++ +LVW+DLE K +S +R
Sbjct: 292 -NVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLR 350
Query: 392 IHGLPVKFDSHLYTESLLQLPSNKQLHTDKHEKKQQ-------------KKRDEFLSKGF 532
I P + + L SL+ L L+ K+ K+QQ K+R +FLSKGF
Sbjct: 351 IKDCPSSYSAELVVSSLV-LGCKGDLNNIKYRKEQQAKEAREAKIMQNTKRRGDFLSKGF 409
Query: 533 KLRL 544
KL L
Sbjct: 410 KLVL 413