BLASTX nr result
ID: Bupleurum21_contig00030005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030005
(621 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249... 142 6e-32
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793... 137 1e-30
ref|XP_002522264.1| replication factor C / DNA polymerase III ga... 136 3e-30
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica... 132 5e-29
ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226... 131 9e-29
>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
Length = 1161
Score = 142 bits (357), Expect = 6e-32
Identities = 88/204 (43%), Positives = 113/204 (55%), Gaps = 4/204 (1%)
Frame = +1
Query: 22 KREVSVGRNSPNDILREEYYQTPV---DGDDMVQETYLGNTGLRSKKLNQKGRRKQDDHR 192
KRE S R+ D+L Y+ P DG+D V E GN+ + K++ QKG+ +Q+
Sbjct: 155 KREESSRRSMRTDLLGG--YEEPSQDQDGNDSVNELVSGNSESKDKRVKQKGKLRQEVLL 212
Query: 193 RTFPEKLQEHGXXXXXXXXXXXXRHGRPAHYEDSHEGAEATIHSNFNALNXXXXXXXXXX 372
+T E+L+E + GR E + E EA+I + LN
Sbjct: 213 KTLSEQLKEFPVDSDAASSHIHLQ-GRRTRKERTGEEPEASIRGYCSGLNRIKKRKFRGA 271
Query: 373 XXXXIATTSRDAMAQNEMSAASNSLAHGAAHKKHEMEEIRE-FGDPNVTRVSRNGCGIPW 549
A RD AQNE+S ASNS A G+ K+EMEE RE +G+ NVTR RNGCGIPW
Sbjct: 272 RRNRAAIGLRDIGAQNELSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPW 331
Query: 550 NWSRIHHRGKSLFDVAGRSLSCGL 621
NWSRIHHRGK+ D+AGRSLSCGL
Sbjct: 332 NWSRIHHRGKTFLDMAGRSLSCGL 355
>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
Length = 1191
Score = 137 bits (346), Expect = 1e-30
Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 2/201 (0%)
Frame = +1
Query: 25 REVSVGRNSPNDILREEYYQTPVD--GDDMVQETYLGNTGLRSKKLNQKGRRKQDDHRRT 198
RE S +N D L + + P++ G + ++ ++ +++K Q+G+ QD +T
Sbjct: 156 REESGRKNDRPDFL-DVNPEEPLNQAGKSLAEDVISRHSESKARKSKQRGKNVQDAQVKT 214
Query: 199 FPEKLQEHGXXXXXXXXXXXXRHGRPAHYEDSHEGAEATIHSNFNALNXXXXXXXXXXXX 378
E+L + GR E + EA + S+ + +N
Sbjct: 215 LSEQLNDVPLDSDDLASSNIHFRGRFPRQEKIIKEVEARMRSHGSGMNRGKRRKFRSARR 274
Query: 379 XXIATTSRDAMAQNEMSAASNSLAHGAAHKKHEMEEIREFGDPNVTRVSRNGCGIPWNWS 558
+ATTSRD +A+NE+S ASNSLA + H K+ +EE EF D NVTR +NGCGIPWNWS
Sbjct: 275 TRVATTSRDIVAENELSVASNSLAQASVHHKYHLEEADEFADENVTRAPKNGCGIPWNWS 334
Query: 559 RIHHRGKSLFDVAGRSLSCGL 621
RIHHRGK+ D+AGRSLSCGL
Sbjct: 335 RIHHRGKTFLDMAGRSLSCGL 355
>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 1105
Score = 136 bits (343), Expect = 3e-30
Identities = 80/201 (39%), Positives = 111/201 (55%), Gaps = 1/201 (0%)
Frame = +1
Query: 22 KREVSVGRNSPNDILR-EEYYQTPVDGDDMVQETYLGNTGLRSKKLNQKGRRKQDDHRRT 198
KRE S +++ D+L +E + + +V + GN+ +S+K KG+ QD H +T
Sbjct: 156 KREESSRKSNRADLLGGDEDLSHNQEVNGLVNDDVSGNSESKSRKSKHKGKHSQDFHIKT 215
Query: 199 FPEKLQEHGXXXXXXXXXXXXRHGRPAHYEDSHEGAEATIHSNFNALNXXXXXXXXXXXX 378
++L E HGR + + + E E +I ++ +N
Sbjct: 216 LSDQLNEIPMDSDVAASSNVHLHGRRSQQDKTGEERETSIRG-YSGINRTKRRKFRGARR 274
Query: 379 XXIATTSRDAMAQNEMSAASNSLAHGAAHKKHEMEEIREFGDPNVTRVSRNGCGIPWNWS 558
AT +RD QNEMS ASNSL G+ ++ +EE E+GDPNVTR RNGCGIPWNWS
Sbjct: 275 TR-ATPARDVEGQNEMSVASNSLNQGSVRPRYCIEE-EEYGDPNVTRAPRNGCGIPWNWS 332
Query: 559 RIHHRGKSLFDVAGRSLSCGL 621
RIHHRGK+ D+AGRSLSCGL
Sbjct: 333 RIHHRGKTFLDMAGRSLSCGL 353
>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
gi|355482867|gb|AES64070.1| DNA polymerase III subunit
gamma/tau [Medicago truncatula]
Length = 1177
Score = 132 bits (332), Expect = 5e-29
Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Frame = +1
Query: 97 GDDMVQETYLGNTGLRSKKLNQKGRRKQDDHRRTFPEKLQEHGXXXXXXXXXXXXRHGRP 276
G + ++ ++ +K Q+G+ QD +T E+L + R
Sbjct: 185 GKSLAEDVVSRHSQSIERKSRQRGKNVQDVQAKTLSEQLHDVPLDSDDLASSNIHFRARF 244
Query: 277 AHYEDSHEGAE-ATIHSNFNALNXXXXXXXXXXXXXXIATTSRDAMAQNEMSAASNSLAH 453
E E A+ A++ S+ N +N +ATTSRD A+NE+S ASNSL
Sbjct: 245 RRQEKIIEQAQQASVRSHANGMNRIKRRKFRSTRKARVATTSRDIGAENELSVASNSLPE 304
Query: 454 GAAHKKHEMEEIREFGDPNVTRVSRNGCGIPWNWSRIHHRGKSLFDVAGRSLSCGL 621
G+AH+K+ EE+ + D NVTR +NGCG+PWNWSRIHHRGK+ D+AGRSLSCGL
Sbjct: 305 GSAHQKYHSEEVDNYADDNVTRAPKNGCGMPWNWSRIHHRGKTFLDIAGRSLSCGL 360
>ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226355 [Cucumis sativus]
Length = 1120
Score = 131 bits (330), Expect = 9e-29
Identities = 76/208 (36%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Frame = +1
Query: 1 VREHGSRKREVSVGRNSPNDILREEYYQTPVDGDDMVQETYLGNTGLRSKKLNQKGRRKQ 180
+R+ +RE S R+ N +L +PV ++ E + + +K QK ++ +
Sbjct: 148 IRDGRRIRREESSRRSDRNSVLDGNEESSPVHDAHLLHEVISRKSESKDRKSEQKDKQVR 207
Query: 181 DDHRRTFPEKLQEHGXXXXXXXXXXXXRHGRPAHYEDSHEGAEATIHSNFNALNXXXXXX 360
+T E+L HGR + E + E + N + LN
Sbjct: 208 SIPFKTLSEQLNS-APIDSDDIASSSAVHGRRSQQERIADEPEPSFRGNCSGLNRGKRRK 266
Query: 361 XXXXXXXXIATTSRDAMAQNEMSAASNSLAHGAAHKKHEMEEIRE-FGDPNVTRVSRNGC 537
+ TSRD QNE+S ASN+LAHG+AH KH+MEE E +G+ NV RNGC
Sbjct: 267 FRGTRRSRMNLTSRDTGVQNELSVASNTLAHGSAHSKHKMEEENENYGNKNVIGGPRNGC 326
Query: 538 GIPWNWSRIHHRGKSLFDVAGRSLSCGL 621
G+PWNWSRIHHRGKS D+AGRS SCG+
Sbjct: 327 GMPWNWSRIHHRGKSFLDMAGRSFSCGI 354