BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030001
         (1749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_656505.1| coat protein [Raphanus sativus cryptic virus 1]...   377   e-102
gb|ABA46820.1| coat protein [Raphanus sativus cryptic virus 1]        370   e-100
gb|ABX79673.1| putative coat protein [Raphanus sativus cryptic v...   369   1e-99
emb|CAQ53730.1| coat protein [Chondrostereum purpureum cryptic v...   102   3e-19
emb|CAH03669.1| putative coat protein [Cherry chlorotic rusty sp...    94   9e-17

>ref|YP_656505.1| coat protein [Raphanus sativus cryptic virus 1]
            gi|76573429|gb|ABA46819.1| coat protein [Raphanus sativus
            cryptic virus 1]
          Length = 505

 Score =  377 bits (968), Expect = e-102
 Identities = 209/474 (44%), Positives = 270/474 (56%), Gaps = 7/474 (1%)
 Frame = +1

Query: 133  NPVGPVPAAGN-RNFVAERNHEMRQDHAAA----NDRFKVRKRAVNLPHKPANADIENSI 297
            N  G V AA N RN   ER  E RQD AAA    N RF VR+  +      +  D+E ++
Sbjct: 25   NDPGTVAAAPNARNLHLEREQEARQDRAAAAFVPNTRFAVRRPTIRPSPAHSAPDLETAL 84

Query: 298  FSTAANYPPIRAVYPSLSYFIPNFKSTLYYVNVMDCLMASTKSWTDDCLGWVPPYSQIYI 477
            F +A N+PP    YPS S +IPNF S  YY+N MD LM  T +WT++C GWVPPYSQIYI
Sbjct: 85   FDSAVNHPPTPVSYPSTSSYIPNFTSAFYYLNKMDSLMVQTLNWTNNCSGWVPPYSQIYI 144

Query: 478  SVLLYIQVMRAMEAAGALRPNSDLSVLLRELRDTFPLENLMIPGPLVCLFQNLTSFWPFA 657
            S+LLY+QVMRAM+ AG LRPNS+LS L  E+   FP E+LM+PGPLV LF+N+T+F P  
Sbjct: 145  SMLLYLQVMRAMKKAGVLRPNSELSHLFNEMSTIFPFESLMVPGPLVNLFENITAFRPLQ 204

Query: 658  SGRFGNVTPFLPNSPGWSQERQFCFSDTICSVLPNISLFFSRLHSTLSLVEYDDLTEEEF 837
            +  FGNVTPFLP  PGWS    F  + ++   LP+I    SRL         + L +  F
Sbjct: 205  TDSFGNVTPFLPAEPGWSNATFFAPNGSLVRHLPHIPALISRLRRICETASENGLNDISF 264

Query: 838  RNHVQGPSHLGFLFERPCDANEFEMSNMCSPGADLSYPGSLRLWREAHQQLNNFDIPEDY 1017
              H  GP  +  LF   CD +  E   + +PG   SY G+L LWR+A  QL     PE  
Sbjct: 265  SAHHHGPEFISELFGHICDNDLPEQLLLLTPGLATSYSGTLYLWRQARSQLQRSLFPEAL 324

Query: 1018 NVDETVVNDNWTAALRFDENMQWFSPIVNMMDKYCRFFHGSVALSECTPDGSAAGSIICT 1197
             V++ V N  WT+ L  D +  WFSP+  MM+KYC+++HGS  LS    DGSAAGS+IC 
Sbjct: 325  TVNDVVPN-TWTSFLCLDNDDSWFSPLAAMMNKYCQYWHGSAPLSSIPADGSAAGSMICN 383

Query: 1198 AYPDSTLLMPPQWYEDAGGRTSRTHGDPNCI--GHYTLRSIPTLEFTASTCIEDIPDANV 1371
                S++    QW        +     P     G+Y     P L F A TCIEDI  A++
Sbjct: 384  ELNGSSIYRLAQWTAPIMDPPADEDAPPVIAEPGYYYPNPNPVLIFDARTCIEDISSAHM 443

Query: 1372 LAALTYQFNLQRLGFADADALQGRFWKVIPNTYEKTHIDVFQGVIATIAREFHS 1533
             +A+T+  NL   G   A+ L+G+FW   P +Y      V+  V A IARE+HS
Sbjct: 444  FSAMTFHPNLIPYGANRANFLKGQFWNCHPPSYSAPAHQVYPAVSALIAREYHS 497


>gb|ABA46820.1| coat protein [Raphanus sativus cryptic virus 1]
          Length = 502

 Score =  370 bits (951), Expect = e-100
 Identities = 200/474 (42%), Positives = 267/474 (56%)
 Frame = +1

Query: 121  RQVLNPVGPVPAAGNRNFVAERNHEMRQDHAAANDRFKVRKRAVNLPHKPANADIENSIF 300
            +QV++      AA    F AE        HA A  R    K    L            I 
Sbjct: 42   QQVIDQAANAAAAQVARFEAE--------HAQAQTRAATAKNYSTL------------IC 81

Query: 301  STAANYPPIRAVYPSLSYFIPNFKSTLYYVNVMDCLMASTKSWTDDCLGWVPPYSQIYIS 480
              AA   P++  YP +S F PNF ++  Y+N+MD  M STK WTD+CLGW PPYSQIYI 
Sbjct: 82   GPAAMIHPVKDQYPEVSTFTPNFSTSYQYLNLMDQSMISTKRWTDNCLGWAPPYSQIYIG 141

Query: 481  VLLYIQVMRAMEAAGALRPNSDLSVLLRELRDTFPLENLMIPGPLVCLFQNLTSFWPFAS 660
            +L YIQ MRAM AAG L PNS++S LL      FPL++L IPGPLV  F+++  F P AS
Sbjct: 142  ILGYIQTMRAMNAAGLLEPNSEISRLLGNFMKVFPLKSLWIPGPLVSFFKSIACFKPSAS 201

Query: 661  GRFGNVTPFLPNSPGWSQERQFCFSDTICSVLPNISLFFSRLHSTLSLVEYDDLTEEEFR 840
             + G V+P LP  PGWS+ R++       S LPNI++F SRL S  +    +  TE+ F 
Sbjct: 202  EKHGMVSPTLPTRPGWSRNRRYRIVTDASSHLPNINIFISRLRSICAAASRNGATEDSFL 261

Query: 841  NHVQGPSHLGFLFERPCDANEFEMSNMCSPGADLSYPGSLRLWREAHQQLNNFDIPEDYN 1020
              + GP +L  LF +PC     E++N+ SPG++LSY G LRLW+ A  +L+        +
Sbjct: 262  RDIDGPQYLATLFAQPCSHTASEIANLSSPGSNLSYSGDLRLWKLASARLSFVGPLALLD 321

Query: 1021 VDETVVNDNWTAALRFDENMQWFSPIVNMMDKYCRFFHGSVALSECTPDGSAAGSIICTA 1200
               T V+DNWTA L F E   WF  I  MM KYC+F+ GS  L EC+P  SAAGS+ C A
Sbjct: 322  SAVTDVSDNWTAFLGFSERSDWFGSINAMMVKYCQFWKGSTTLYECSPASSAAGSVRCIA 381

Query: 1201 YPDSTLLMPPQWYEDAGGRTSRTHGDPNCIGHYTLRSIPTLEFTASTCIEDIPDANVLAA 1380
              D+ +  PP+W    G  TS THGD N  GHY +R    L F A+T + ++P A+  +A
Sbjct: 382  -TDTNIFTPPEWNAQQGAHTSFTHGDANQAGHYNMRHNAHLTFQATTSVHELPLAHYYSA 440

Query: 1381 LTYQFNLQRLGFADADALQGRFWKVIPNTYEKTHIDVFQGVIATIAREFHSNVQ 1542
            LTY  NL     A A   +G FW + P+ Y ++ I ++ G+ A IAR++HS  +
Sbjct: 441  LTYNINLAESEAAMAATCRGTFWNIFPDAYTRSGIQIYPGIPALIARDYHSETR 494


>gb|ABX79673.1| putative coat protein [Raphanus sativus cryptic virus 1]
          Length = 502

 Score =  369 bits (948), Expect = 1e-99
 Identities = 200/474 (42%), Positives = 267/474 (56%)
 Frame = +1

Query: 121  RQVLNPVGPVPAAGNRNFVAERNHEMRQDHAAANDRFKVRKRAVNLPHKPANADIENSIF 300
            +QV++      AA    F AE        HA A  R    K    L            I 
Sbjct: 42   QQVIDQAANAAAAQVARFEAE--------HAQAQTRAATAKNYSTL------------IC 81

Query: 301  STAANYPPIRAVYPSLSYFIPNFKSTLYYVNVMDCLMASTKSWTDDCLGWVPPYSQIYIS 480
              AA   P++  YP +S F PNF ++  Y+N+MD  M STK WTD+CLGW PPYSQIYI 
Sbjct: 82   GPAAMIHPVKDQYPEVSTFTPNFSTSYQYLNLMDQSMISTKRWTDNCLGWAPPYSQIYIG 141

Query: 481  VLLYIQVMRAMEAAGALRPNSDLSVLLRELRDTFPLENLMIPGPLVCLFQNLTSFWPFAS 660
            +L YIQ MRAM AAG L PNS++S LL      FPL++L IPGPLV  F+++  F P AS
Sbjct: 142  ILGYIQTMRAMNAAGLLEPNSEISRLLGNFMKVFPLKSLWIPGPLVSFFKSIACFKPSAS 201

Query: 661  GRFGNVTPFLPNSPGWSQERQFCFSDTICSVLPNISLFFSRLHSTLSLVEYDDLTEEEFR 840
             + G V+P LP  PGWS+ R++       S LPNI++F SRL S  +    +  TE+ F 
Sbjct: 202  EKHGMVSPTLPTRPGWSRNRRYRIVTDASSHLPNINIFISRLRSICAAASRNGATEDSFL 261

Query: 841  NHVQGPSHLGFLFERPCDANEFEMSNMCSPGADLSYPGSLRLWREAHQQLNNFDIPEDYN 1020
              + GP +L  LF +PC     E++N+ SPG++LSY G LRLW+ A  +L+        +
Sbjct: 262  RDIDGPQYLATLFAQPCSHTANEIANLISPGSNLSYSGDLRLWKLASARLSFVGPLALLD 321

Query: 1021 VDETVVNDNWTAALRFDENMQWFSPIVNMMDKYCRFFHGSVALSECTPDGSAAGSIICTA 1200
               T V+DNWTA L F E   WF  I  MM KYC+F+ GS  L EC+P  SAAGS+ C A
Sbjct: 322  SAVTDVSDNWTAFLGFSERSDWFGSINAMMVKYCQFWKGSTTLYECSPASSAAGSVRCIA 381

Query: 1201 YPDSTLLMPPQWYEDAGGRTSRTHGDPNCIGHYTLRSIPTLEFTASTCIEDIPDANVLAA 1380
              D+ +  PP+W    G  TS THGD N  GHY +R    L F A+T + ++P A+  +A
Sbjct: 382  -TDTNIFTPPEWNAQQGTHTSFTHGDANQAGHYNMRHNAHLTFQATTSVHELPLAHYYSA 440

Query: 1381 LTYQFNLQRLGFADADALQGRFWKVIPNTYEKTHIDVFQGVIATIAREFHSNVQ 1542
            LTY  NL     A A   +G FW + P+ Y ++ I ++ G+ A IAR++HS  +
Sbjct: 441  LTYNINLAESEAAMAATCRGTFWNIFPDAYTRSGIQIYPGIPALIARDYHSETR 494


>emb|CAQ53730.1| coat protein [Chondrostereum purpureum cryptic virus 1]
          Length = 480

 Score =  102 bits (254), Expect = 3e-19
 Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 7/287 (2%)
 Frame = +1

Query: 349  SYFIPNFKSTLYYVNVMDCLMASTKSWTDDCLGWVPPYSQIYISVLLYIQVMRAMEAAGA 528
            S+F+P+ +     V  MD +M +T  +T     W P  S++YI+VL +IQ +R M+A G 
Sbjct: 101  SWFLPSSRYLYRIVQEMDIIMLNTHRFTQSVHAWSPLVSRVYIAVLFWIQTIRCMQATGF 160

Query: 529  LRPNSDLSVLLRELRDTFPLENLMIPGPLVCLFQNLTSFWPFASGRFGNVTPFLPNSPGW 708
            L P   ++  + EL   FP   L++PGPLV LF++L +  P + G +G+V P    + G 
Sbjct: 161  L-PREGIA-FINELLQDFPARTLVVPGPLVSLFRSLCASSP-SFGTYGDVFPAF-ETAGI 216

Query: 709  SQERQFCFSDTIC------SVLPNISLFFSRLHSTLSLVEYDDLTEEEFRNHVQGPSHLG 870
                  CF+           ++PN++L   +L         +  T  +F   V G    G
Sbjct: 217  GASPANCFTLNSARFPQWYMLMPNVALLLDQLTCFTQACVNNPATIGDF---VIGDDLFG 273

Query: 871  FLFERPCDANEFEMSNMCSPGADLSYPGSLRLWREAHQQLNNFDIPEDYNVD-ETVVNDN 1047
              F+    ++        +PG       + +         N   +P   N D +      
Sbjct: 274  TPFDGTIGSHR---QQRVAPGMTEPVYFNTKAAENHASMRNLMALPTRLNYDPQNATPLT 330

Query: 1048 WTAALRFDENMQWFSPIVNMMDKYCRFFHGSVALSECTPDGSAAGSI 1188
                 RF+ + +WFS I++ M  Y +FF GSV L EC P G  A  +
Sbjct: 331  LNEMFRFNTDKRWFSRIISTMTVYSKFFDGSVTLYECPPVGPPAAQV 377


>emb|CAH03669.1| putative coat protein [Cherry chlorotic rusty spot associated
            partitivirus]
          Length = 504

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 18/324 (5%)
 Frame = +1

Query: 295  IFSTAANYPPIRAVYPSLSYFIPNFKSTLYYVNVMDCLMASTKSWTDDCLGWVPPYSQIY 474
            + S  ++ P     +  +SY +P+     Y +++MD  MA TK +TD    W P  SQ+Y
Sbjct: 70   MLSGVSDLPFFGIKHNDVSYVVPDTTQLFYVLSIMDTQMARTKRFTDANPDWHPFVSQLY 129

Query: 475  ISVLLYIQVMRAMEAAGALRPNSDLSVLLRELRDTFPLENLMIPGPLVCLFQNLTSFWPF 654
            I+VL Y QV++     G +  ++D  + +  L   F  E+L IPGP+   FQ+L +    
Sbjct: 130  IAVLFYYQVLKNQTHGGMI--SNDQRLFVDFLDTQFKAEHLKIPGPIAIFFQSLAAN-AG 186

Query: 655  ASGRFGNVTPFLPNSPGWSQERQFCFSDTICSVLPNISLF---FSRLHSTLSLVEYDDLT 825
             +  FGN+   +PN+   S    + + D + ++LPN+      F RL S +S V    + 
Sbjct: 187  PNENFGNLVFGIPNAHDISC-TSYLWQDKVHTILPNVIFILDQFMRLISLISPVNSGPVQ 245

Query: 826  EEEFRNHVQGPSHLGFLFERPCDANEFEMSNMCSPGADLSYPGSLRL----------WRE 975
                 N     +    +F  P   +E     M +P A   +  ++ L          WR 
Sbjct: 246  ----ANASHTDTVYTTIFGAPASKDEATRFAMLTPSARSDFQTTVGLLNGLSTSSNVWRN 301

Query: 976  AHQQLNNFDIPEDYNVDETVVNDNWTAALR-----FDENMQWFSPIVNMMDKYCRFFHGS 1140
                 N+ D       D+ +++ +     R      D    WF+ ++ +M  Y  FF  +
Sbjct: 302  TLPFANDGDSQYVITEDDELLDLDQVFGFRGIGPYADRPYGWFAQVIRVMQPYSDFFKDT 361

Query: 1141 VALSECTPDGSAAGSIICTAYPDS 1212
            V+L   T  G+   S I T Y D+
Sbjct: 362  VSLGSVTTTGTGI-SYIRTKYVDT 384