BLASTX nr result

ID: Bupleurum21_contig00029990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029990
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326167.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   139   2e-31
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   138   5e-31
emb|CBI32615.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002322854.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29

>ref|XP_002326167.1| predicted protein [Populus trichocarpa] gi|222833360|gb|EEE71837.1|
           predicted protein [Populus trichocarpa]
          Length = 659

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271 KMVNIINLEEYVSLIVDATIGSGISRQMEAFKLGFNQVFPIRHLQIFTEEELEHLLCGD- 95
           K+VN++NL+ YVS IVDATI +GISRQ+EAFK GFNQVFPI+HL IFTEEELE LLCG+ 
Sbjct: 468 KIVNMVNLDAYVSRIVDATIHTGISRQVEAFKSGFNQVFPIKHLMIFTEEELERLLCGER 527

Query: 94  EVWNINELLDHIKFDHGYASSCPPVVNLLSI 2
           E W  NELLDHIKFDHGY +S PPVVNLL I
Sbjct: 528 EFWAFNELLDHIKFDHGYTASSPPVVNLLEI 558


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
            gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
            putative [Ricinus communis]
          Length = 1561

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/91 (72%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271  KMVNIINLEEYVSLIVDATIGSGISRQMEAFKLGFNQVFPIRHLQIFTEEELEHLLCGD- 95
            KMVN+ NLEEY+SL+VDATI +GISRQ+EAFK GFNQVFPI+HLQ+FT EELE LLCG+ 
Sbjct: 1383 KMVNMDNLEEYISLVVDATINAGISRQVEAFKSGFNQVFPIKHLQVFTVEELERLLCGEH 1442

Query: 94   EVWNINELLDHIKFDHGYASSCPPVVNLLSI 2
            + W  NEL DHIKFDHGY +S PP+ NLL I
Sbjct: 1443 DFWVYNELFDHIKFDHGYTASSPPITNLLEI 1473


>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/91 (72%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271  KMVNIINLEEYVSLIVDATIGSGISRQMEAFKLGFNQVFPIRHLQIFTEEELEHLLCGD- 95
            KMV + NLEEYVSL+VD TI +GISRQ+EAF+ GFNQVFPI+HLQIFTEEELE LLCG+ 
Sbjct: 1397 KMVTMTNLEEYVSLLVDTTINAGISRQVEAFRSGFNQVFPIKHLQIFTEEELEKLLCGER 1456

Query: 94   EVWNINELLDHIKFDHGYASSCPPVVNLLSI 2
            + W  N LLDHIKFDHGY +S PP++NLL I
Sbjct: 1457 DSWACNGLLDHIKFDHGYTASSPPIINLLEI 1487


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/91 (72%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271  KMVNIINLEEYVSLIVDATIGSGISRQMEAFKLGFNQVFPIRHLQIFTEEELEHLLCGD- 95
            KMV + NLEEYVSL+VD TI +GISRQ+EAF+ GFNQVFPI+HLQIFTEEELE LLCG+ 
Sbjct: 1309 KMVTMTNLEEYVSLLVDTTINAGISRQVEAFRSGFNQVFPIKHLQIFTEEELEKLLCGER 1368

Query: 94   EVWNINELLDHIKFDHGYASSCPPVVNLLSI 2
            + W  N LLDHIKFDHGY +S PP++NLL I
Sbjct: 1369 DSWACNGLLDHIKFDHGYTASSPPIINLLEI 1399


>ref|XP_002322854.1| predicted protein [Populus trichocarpa] gi|222867484|gb|EEF04615.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/88 (73%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
 Frame = -2

Query: 271 KMVNIINLEEYVSLIVDATIGSGISRQMEAFKLGFNQVFPIRHLQIFTEEELEHLLCGD- 95
           K+VN+ NLE YVS IVDATI +GISRQ+EAFK GFNQVFPI+HL IFTEEELE LLCG+ 
Sbjct: 464 KIVNMDNLEVYVSHIVDATIHTGISRQVEAFKSGFNQVFPIKHLMIFTEEELERLLCGER 523

Query: 94  EVWNINELLDHIKFDHGYASSCPPVVNL 11
           + W  NELLDHIKFDHGY +S PP+VN+
Sbjct: 524 DFWAFNELLDHIKFDHGYTASSPPIVNV 551


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