BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029963
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru...   275   9e-72
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...   275   9e-72
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...   274   2e-71
ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein lig...   271   8e-71
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig...   271   1e-70

>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
           gi|355490917|gb|AES72120.1| RCC1 domain-containing
           protein [Medicago truncatula]
          Length = 535

 Score =  275 bits (702), Expect = 9e-72
 Identities = 141/233 (60%), Positives = 169/233 (72%), Gaps = 12/233 (5%)
 Frame = +2

Query: 14  MDTATKGMETI-----LDQGISSIIISSP------EKRHCTEVAPNGEFPLSAIPSLVLH 160
           MD  T G  TI      DQ I++I++++P      ++R C   +  GEFPLSA PS+VLH
Sbjct: 1   MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60

Query: 161 IL-GFNLDPKDLVNLEATCSFFRKPANCDPDHELSLSELAALDMCNKRAIFKPMSEDERQ 337
           +L   NLDP+DL  LEATCSFFR+PAN  PD  LSL+ELAA DMC KRAIFKPM+ +ERQ
Sbjct: 61  VLTSCNLDPQDLAKLEATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQ 120

Query: 338 EMKRRCGGSWKLVLRFLIVGETCTRREKSQAIAGPGHSIAVNSKGVAYSFGSNDFGELGH 517
           ++K+RCGGSWKLVLR+L+ GE C RREKSQAIAGPGHSIAV SKG  YSFGSN  G+LGH
Sbjct: 121 DLKQRCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGH 180

Query: 518 GTMEHDWRPRQIRSLXXXXXXXXXXXXXRTMLVSDAGQVYAFGKDSFGYFEDG 676
           GT E +WRP+ IR+L             RTML++D+GQVYAFGKDSFG  E G
Sbjct: 181 GTTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYG 233


>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  275 bits (702), Expect = 9e-72
 Identities = 146/236 (61%), Positives = 175/236 (74%), Gaps = 15/236 (6%)
 Frame = +2

Query: 14  MDTATKGMETI-----LDQGISSII---ISSPEK--RHCTEVAPNGEFPLSAIPSLVLHI 163
           MD+ T G  TI      DQ +++I+   +S+ ++  RHC   +  GEFPL+A PS+VLH+
Sbjct: 1   MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60

Query: 164 LGF-NLDPKDLVNLEA----TCSFFRKPANCDPDHELSLSELAALDMCNKRAIFKPMSED 328
           L   NLDP+DL  LEA    TCSFFR+PA+  PD+ELS+SELAALDMC KRAIFKPM+ +
Sbjct: 61  LTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPE 120

Query: 329 ERQEMKRRCGGSWKLVLRFLIVGETCTRREKSQAIAGPGHSIAVNSKGVAYSFGSNDFGE 508
           ERQ++K+RCGGSWKLVLRFL+ GE C RRE+SQAIAGPGHSIAV S GVAYSFGSN  G+
Sbjct: 121 ERQDLKQRCGGSWKLVLRFLLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQ 180

Query: 509 LGHGTMEHDWRPRQIRSLXXXXXXXXXXXXXRTMLVSDAGQVYAFGKDSFGYFEDG 676
           LGHGT E +WRPRQIRSL             RTML+SDAG+VYAFGKDSFG  E G
Sbjct: 181 LGHGTTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYG 236


>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  274 bits (700), Expect = 2e-71
 Identities = 143/232 (61%), Positives = 168/232 (72%), Gaps = 11/232 (4%)
 Frame = +2

Query: 14  MDTATKGMETIL-----DQGISSIIIS-----SPEKRHCTEVAPNGEFPLSAIPSLVLHI 163
           MD  T G  T+      DQ I++II +       ++RHC   +  GEFPLSA PS+VLH+
Sbjct: 1   MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60

Query: 164 L-GFNLDPKDLVNLEATCSFFRKPANCDPDHELSLSELAALDMCNKRAIFKPMSEDERQE 340
           L   NL+P+DL  LEATCSFFR+PAN  PD +LSLSELAALDMC KRAIFKPM+ ++RQ+
Sbjct: 61  LTACNLEPQDLAKLEATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQD 120

Query: 341 MKRRCGGSWKLVLRFLIVGETCTRREKSQAIAGPGHSIAVNSKGVAYSFGSNDFGELGHG 520
           +K RCGGSWKL LR+L+ GE C RREKSQAIAGPGHSIAV SKGV YSFGSN  G+LGHG
Sbjct: 121 LKLRCGGSWKLALRYLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 180

Query: 521 TMEHDWRPRQIRSLXXXXXXXXXXXXXRTMLVSDAGQVYAFGKDSFGYFEDG 676
           T + +WRPR IR+L             RTMLVSD+GQVYAFGKDSFG  E G
Sbjct: 181 TTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYG 232


>ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus] gi|449494867|ref|XP_004159669.1| PREDICTED:
           probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  271 bits (694), Expect = 8e-71
 Identities = 141/230 (61%), Positives = 164/230 (71%), Gaps = 6/230 (2%)
 Frame = +2

Query: 5   AVPMDTATKGMETILDQGISSIIISSPE-----KRHCTEVAPNGEFPLSAIPSLVLHIL- 166
           A   +TA     +I DQ +S+I+ S+       KRHC   +  GEFPL+A PS+VLH+L 
Sbjct: 3   ATTSETAALQFHSIPDQSVSTIVTSATSTFPQSKRHCFGESDPGEFPLAANPSIVLHVLT 62

Query: 167 GFNLDPKDLVNLEATCSFFRKPANCDPDHELSLSELAALDMCNKRAIFKPMSEDERQEMK 346
             NLDP+DL  LEATCSFFR+PAN  PD+ELS+SELAALDMC KRAIFKPM+ ++ + MK
Sbjct: 63  ACNLDPQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRKRAIFKPMTPEQHEAMK 122

Query: 347 RRCGGSWKLVLRFLIVGETCTRREKSQAIAGPGHSIAVNSKGVAYSFGSNDFGELGHGTM 526
           +RCGGSWKLVLRFL+ GE+C RREKS AIAGPGHSIAV SKG  YSFGSN  G+LGHGT 
Sbjct: 123 QRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNSSGQLGHGTT 182

Query: 527 EHDWRPRQIRSLXXXXXXXXXXXXXRTMLVSDAGQVYAFGKDSFGYFEDG 676
           E    PR IRSL             RTML+SDAG VYAFGKDSFG  E G
Sbjct: 183 EEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYG 232


>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
           protein product [Vitis vinifera]
          Length = 534

 Score =  271 bits (693), Expect = 1e-70
 Identities = 143/233 (61%), Positives = 168/233 (72%), Gaps = 9/233 (3%)
 Frame = +2

Query: 20  TATKGMETILDQGISSIIIS-----SPEKRHCTEVAPNGEFPLSAIPSLVLHIL-GFNLD 181
           T T     I DQ I++I+ S       ++RHC   +  GEFPL+A PS+VLH+L   NL+
Sbjct: 8   TPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHVLTACNLE 67

Query: 182 PKDLVNLEATCSFFRKPANCDPDHELSLSELAALDMCNKRAIFKPMSEDERQEMKRRCGG 361
           P+DL  LEATCSFFR+PA+  PD ELS+SELAALDMC KRAIF+PM  +ER+ +K+RCGG
Sbjct: 68  PQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGG 127

Query: 362 SWKLVLRFLIVGETCTRREKSQAIAGPGHSIAVNSKGVAYSFGSNDFGELGHGTMEHDWR 541
           SWKLVLRFL+ GE C RREKSQAIAGPGHSIAV  KG  YSFGSN  G+LGHGT + +WR
Sbjct: 128 SWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWR 187

Query: 542 PRQIRSLXXXXXXXXXXXXXRTMLVSDAGQVYAFGKDSFG---YFEDGTMLVS 691
           PRQIRSL             RTML+SDAGQVYAFGKDSFG   Y   GT LV+
Sbjct: 188 PRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 240