BLASTX nr result

ID: Bupleurum21_contig00029961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029961
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142229.1| PREDICTED: uncharacterized protein LOC101213...    80   2e-13
tpg|DAA47978.1| TPA: putative DNA-binding bromodomain-containing...    76   3e-12
ref|XP_002444768.1| hypothetical protein SORBIDRAFT_07g027680 [S...    75   6e-12
emb|CBI32173.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...    74   2e-11

>ref|XP_004142229.1| PREDICTED: uncharacterized protein LOC101213195 [Cucumis sativus]
          Length = 673

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = -3

Query: 266 MEKADERSGKEDWGTWEELLLAFAVKRHGTASWESVSHEIQKRCSNLTPSAVTPRNCKLR 87
           M K  E + K  WGT EELLLA AV RHGTASWESV+ EI  RCS+ + S++TP++C+ +
Sbjct: 1   MVKQRETNAKR-WGTLEELLLASAVNRHGTASWESVAMEIHNRCSHQSSSSLTPQDCRNK 59

Query: 86  FNDLKLRYDRDTDRHTDANDDASSVIP 6
           F DLK R+   +    D++ D ++++P
Sbjct: 60  FYDLKRRF--LSQNVLDSDSDPTTLMP 84


>tpg|DAA47978.1| TPA: putative DNA-binding bromodomain-containing family protein
           [Zea mays]
          Length = 668

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/77 (46%), Positives = 49/77 (63%)
 Frame = -3

Query: 245 SGKEDWGTWEELLLAFAVKRHGTASWESVSHEIQKRCSNLTPSAVTPRNCKLRFNDLKLR 66
           +G E WGTWEELLLA AV++HGTASW+SV+ E+  RC      ++TP  C+LR+  L  R
Sbjct: 18  AGGEIWGTWEELLLACAVRKHGTASWDSVAMEMLSRCPPAAADSLTPAGCRLRYRLLHRR 77

Query: 65  YDRDTDRHTDANDDASS 15
           +      + D   DA+S
Sbjct: 78  FTAAAAVNGDEEPDAAS 94


>ref|XP_002444768.1| hypothetical protein SORBIDRAFT_07g027680 [Sorghum bicolor]
           gi|241941118|gb|EES14263.1| hypothetical protein
           SORBIDRAFT_07g027680 [Sorghum bicolor]
          Length = 645

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 34/74 (45%), Positives = 46/74 (62%)
 Frame = -3

Query: 245 SGKEDWGTWEELLLAFAVKRHGTASWESVSHEIQKRCSNLTPSAVTPRNCKLRFNDLKLR 66
           +G E WGTWEELLLA AV++HGTASW+SV+ E+  RC      ++TP  C+LR+  L  R
Sbjct: 18  AGGEIWGTWEELLLACAVRKHGTASWDSVAMEMLSRCPPAAADSLTPAGCRLRYRLLHRR 77

Query: 65  YDRDTDRHTDANDD 24
           +        D  D+
Sbjct: 78  FAAGAGSENDDGDE 91


>emb|CBI32173.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
 Frame = -3

Query: 251 ERSGKEDWGTWEELLLAFAVKRHGTASWESVSHEIQKRCSNLTPSAVTPRNCKLRFNDLK 72
           E+   + W TWEELLLA AVKRHG  +W+SV+ EIQ R S+L     T +NC+ +++DLK
Sbjct: 25  EKRDNDTWTTWEELLLACAVKRHGFQNWDSVAMEIQTR-SSLPHLLTTAQNCQQKYHDLK 83

Query: 71  LRYD---RDTDRHTDAND---DASSVIPW 3
            R+    +D D  T + +   D +  IPW
Sbjct: 84  RRFTATAKDNDAETQSQNQVRDETDTIPW 112


>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
           gi|147768907|emb|CAN75881.1| hypothetical protein
           VITISV_024454 [Vitis vinifera]
          Length = 686

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
 Frame = -3

Query: 251 ERSGKEDWGTWEELLLAFAVKRHGTASWESVSHEIQKRCSNLTPSAVTPRNCKLRFNDLK 72
           E+   + W TWEELLLA AVKRHG  +W+SV+ EIQ R S+L     T +NC+ +++DLK
Sbjct: 25  EKRDNDTWTTWEELLLACAVKRHGFQNWDSVAMEIQTR-SSLPHLLTTAQNCQQKYHDLK 83

Query: 71  LRYD---RDTDRHTDAND---DASSVIPW 3
            R+    +D D  T + +   D +  IPW
Sbjct: 84  RRFTATAKDNDAETQSQNQVRDETDTIPW 112


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