BLASTX nr result

ID: Bupleurum21_contig00029956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029956
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putativ...   120   9e-26
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   113   1e-23
emb|CBI35308.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002329713.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   108   4e-22

>ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223536102|gb|EEF37758.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 778

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   NQCLRNACNEDG----CIKFIDCGQGNGKERFEDDLSNWDSWRHNNTNASACFGEGDFQY 170
           N+CLR+AC        C++FIDCG GN  ER   + S W +W  +N NASACF E  F Y
Sbjct: 399 NRCLRDACRHSSIWPECMQFIDCGHGNNVERNASN-SKWKNWTQSNVNASACFTEDGFSY 457

Query: 171 GIYKQTVNLTTNSNLATRYIYSLFWGFQQISTLAGNQ 281
           GI+ Q VNLTT  ++ TRY+YSLFWGFQQISTLAGNQ
Sbjct: 458 GIFIQAVNLTTRHSVVTRYVYSLFWGFQQISTLAGNQ 494


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   NQCLRNACNE---DGCIKFIDCGQGNGKERFEDDLSNWDSWRHNNTNASACFGEGDFQYG 173
           NQCLR+AC++   D C+ FIDCG G+    F   L  W  W+ +N NASACF +  F YG
Sbjct: 404 NQCLRDACHDSKIDKCMDFIDCGHGDKIGDFMP-LPGWPLWK-SNENASACFSDDGFPYG 461

Query: 174 IYKQTVNLTTNSNLATRYIYSLFWGFQQISTLAGNQ 281
           IY Q VNLTT  ++ TRY YSLFWGFQQISTLAGNQ
Sbjct: 462 IYTQAVNLTTKHSIVTRYTYSLFWGFQQISTLAGNQ 497


>emb|CBI35308.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   NQCLRNACNE---DGCIKFIDCGQGNGKERFEDDLSNWDSWRHNNTNASACFGEGDFQYG 173
           NQCLR+AC++   D C+ FIDCG G+    F   L  W  W+ +N NASACF +  F YG
Sbjct: 396 NQCLRDACHDSKIDKCMDFIDCGHGDKIGDFMP-LPGWPLWK-SNENASACFSDDGFPYG 453

Query: 174 IYKQTVNLTTNSNLATRYIYSLFWGFQQISTLAGNQ 281
           IY Q VNLTT  ++ TRY YSLFWGFQQISTLAGNQ
Sbjct: 454 IYTQAVNLTTKHSIVTRYTYSLFWGFQQISTLAGNQ 489


>ref|XP_002329713.1| predicted protein [Populus trichocarpa] gi|222870621|gb|EEF07752.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   NQCLRNACNEDG----CIKFIDCGQGNGKERFEDDLSNWDSWRHNNTNASACFGEGDFQY 170
           NQCLR+AC++      C KFIDCG G+     +  +SNW++W+ NN NASACF    F Y
Sbjct: 398 NQCLRDACHDTNYQHECKKFIDCG-GHENIGQQASISNWNNWK-NNVNASACFTPDVFSY 455

Query: 171 GIYKQTVNLTTNSNLATRYIYSLFWGFQQISTLAGNQ 281
           GIY Q VNLT   N  TRY YSLFWGFQQISTLAGNQ
Sbjct: 456 GIYAQAVNLT-GKNTITRYTYSLFWGFQQISTLAGNQ 491


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  108 bits (270), Expect = 4e-22
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   NQCLRNACNED---GCIKFIDCGQGNGKERFEDDLS-NWDSWRHNNTNASACFGEGDFQY 170
           NQCLR+AC+      C+ FIDCG G     F D  + +W  W+ +N NASACF +  F Y
Sbjct: 398 NQCLRDACHNSIIKNCMDFIDCGHGEKVRDFRDLRNLDWQPWK-SNENASACFSDDGFPY 456

Query: 171 GIYKQTVNLTTNSNLATRYIYSLFWGFQQISTLAGNQ 281
           GIY + V LTT  ++ TRY YSLFWGFQQISTLAGNQ
Sbjct: 457 GIYTKAVILTTKPSIVTRYTYSLFWGFQQISTLAGNQ 493


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